RNA–Protein interactions for RNA: ENST00000557159.5

APEX1-216, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 1,803 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-216ENST00000557159 GZF1Q9H116 711 aaPredicted RBP15.73■□□□□ 0.11
APEX1-216ENST00000557159 CHD2O14647 1828 aaKnown RBP15.73■□□□□ 0.11
APEX1-216ENST00000557159 RAB3GAP1Q15042 981 aa15.73■□□□□ 0.11
APEX1-216ENST00000557159 STK26Q9P289 416 aa15.73■□□□□ 0.11
APEX1-216ENST00000557159 ERBB4Q15303 1308 aa15.72■□□□□ 0.11
APEX1-216ENST00000557159 ZNF335Q9H4Z2 1342 aaPredicted RBP15.72■□□□□ 0.11
APEX1-216ENST00000557159 TECPR2O15040 1411 aa15.72■□□□□ 0.11
APEX1-216ENST00000557159 CCDC173Q0VFZ6 552 aa15.72■□□□□ 0.11
APEX1-216ENST00000557159 TCP11L2Q8N4U5 519 aa15.72■□□□□ 0.11
APEX1-216ENST00000557159 NSD2O96028 1365 aa15.72■□□□□ 0.11
APEX1-216ENST00000557159 DZIP1LQ8IYY4 767 aaKnown RBP15.71■□□□□ 0.11
APEX1-216ENST00000557159 KIF16BQ96L93 1317 aa15.71■□□□□ 0.11
APEX1-216ENST00000557159 HS1BP3Q53T59 392 aa15.71■□□□□ 0.1
APEX1-216ENST00000557159 SIRT1Q96EB6 747 aa15.71■□□□□ 0.1
APEX1-216ENST00000557159 DDX19BQ9UMR2 479 aa15.71■□□□□ 0.1
APEX1-216ENST00000557159 NWD1Q149M9 1564 aa15.7■□□□□ 0.1
APEX1-216ENST00000557159 XRN1Q8IZH2 1706 aaKnown RBP15.7■□□□□ 0.1
APEX1-216ENST00000557159 MFAP1P55081 439 aaKnown RBP15.69■□□□□ 0.1
APEX1-216ENST00000557159 TNPO1Q92973 898 aaKnown RBP15.69■□□□□ 0.1
APEX1-216ENST00000557159 ANKRD36BQ8N2N9 1353 aa15.69■□□□□ 0.1
APEX1-216ENST00000557159 ROBO2Q9HCK4 1378 aa15.69■□□□□ 0.1
APEX1-216ENST00000557159 MORC1Q86VD1 984 aa15.68■□□□□ 0.1
APEX1-216ENST00000557159 SLC12A5Q9H2X9 1139 aa15.68■□□□□ 0.1
APEX1-216ENST00000557159 PTCH1Q13635 1447 aa15.68■□□□□ 0.1
APEX1-216ENST00000557159 NSD3Q9BZ95 1437 aa15.68■□□□□ 0.1
APEX1-216ENST00000557159 STRCP1A6NGW2 1772 aa15.68■□□□□ 0.1
APEX1-216ENST00000557159 DLC1Q96QB1 1528 aa15.67■□□□□ 0.1
APEX1-216ENST00000557159 FAM135BQ49AJ0 1406 aa15.67■□□□□ 0.1
APEX1-216ENST00000557159 ATAD2Q6PL18 1390 aa15.67■□□□□ 0.1
APEX1-216ENST00000557159 ZSCAN30Q86W11 494 aa15.67■□□□□ 0.1
APEX1-216ENST00000557159 MAP7D2Q96T17 732 aa15.67■□□□□ 0.1
APEX1-216ENST00000557159 CPS1P31327 1500 aa15.67■□□□□ 0.1
APEX1-216ENST00000557159 OFD1O75665 1012 aa15.66■□□□□ 0.1
APEX1-216ENST00000557159 WAPLQ7Z5K2 1190 aa15.66■□□□□ 0.1
APEX1-216ENST00000557159 GAS2L3Q86XJ1 694 aa15.66■□□□□ 0.1
APEX1-216ENST00000557159 FTSJ3Q8IY81 847 aaKnown RBP15.66■□□□□ 0.1
APEX1-216ENST00000557159 PRAM1Q96QH2 718 aa15.66■□□□□ 0.1
APEX1-216ENST00000557159 KNDC1Q76NI1 1749 aa15.66■□□□□ 0.1
APEX1-216ENST00000557159 IL16Q14005 1332 aa15.66■□□□□ 0.1
APEX1-216ENST00000557159 CFAP53Q96M91 514 aa15.66■□□□□ 0.1
APEX1-216ENST00000557159 TNNQ9UQP3 1299 aa15.66■□□□□ 0.1
APEX1-216ENST00000557159 TULP4Q9NRJ4 1543 aa15.65■□□□□ 0.1
APEX1-216ENST00000557159 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.65■□□□□ 0.1
APEX1-216ENST00000557159 PROSER2Q86WR7 435 aaPredicted RBP15.65■□□□□ 0.1
APEX1-216ENST00000557159 BMP2KLQ5H9B9 411 aa15.64■□□□□ 0.09
APEX1-216ENST00000557159 SPRYD3Q8NCJ5 442 aa15.64■□□□□ 0.09
APEX1-216ENST00000557159 LTBP4Q8N2S1 1624 aa15.64■□□□□ 0.09
APEX1-216ENST00000557159 NUCB1Q02818 461 aa15.64■□□□□ 0.09
APEX1-216ENST00000557159 CALD1Q05682 793 aaKnown RBP15.64■□□□□ 0.09
APEX1-216ENST00000557159 KLHL40Q2TBA0 621 aa15.64■□□□□ 0.09
APEX1-216ENST00000557159 RBM33Q96EV2 1170 aaKnown RBP15.64■□□□□ 0.09
APEX1-216ENST00000557159 ARXQ96QS3 562 aa15.64■□□□□ 0.09
APEX1-216ENST00000557159 TERF2IPQ9NYB0 399 aa15.64■□□□□ 0.09
APEX1-216ENST00000557159 GOLGA6L22H0YM25 854 aa15.63■□□□□ 0.09
APEX1-216ENST00000557159 LRRC7Q96NW7 1537 aa15.62■□□□□ 0.09
APEX1-216ENST00000557159 ATF7IPQ6VMQ6 1270 aa15.62■□□□□ 0.09
APEX1-216ENST00000557159 ANP32BQ92688 251 aaKnown RBP15.62■□□□□ 0.09
APEX1-216ENST00000557159 ZBTB40Q9NUA8 1239 aa15.62■□□□□ 0.09
APEX1-216ENST00000557159 TMEM94Q12767 1356 aa15.62■□□□□ 0.09
APEX1-216ENST00000557159 TRIM27P14373 513 aa15.61■□□□□ 0.09
APEX1-216ENST00000557159 ZNF445P59923 1031 aa15.61■□□□□ 0.09
APEX1-216ENST00000557159 SAFB2Q14151 953 aaKnown RBP eCLIP15.61■□□□□ 0.09
APEX1-216ENST00000557159 HSP90AB1P08238 724 aaKnown RBP15.61■□□□□ 0.09
APEX1-216ENST00000557159 BRPF1P55201 1214 aaPredicted RBP15.61■□□□□ 0.09
APEX1-216ENST00000557159 SRPK2P78362 688 aaKnown RBP15.61■□□□□ 0.09
APEX1-216ENST00000557159 KIAA1211Q6ZU35 1233 aa15.61■□□□□ 0.09
APEX1-216ENST00000557159 KIF2CQ99661 725 aa15.61■□□□□ 0.09
APEX1-216ENST00000557159 K7ELQ4 463 aaPredicted RBP15.6■□□□□ 0.09
APEX1-216ENST00000557159 NASPP49321 788 aaPredicted RBP15.6■□□□□ 0.09
APEX1-216ENST00000557159 CFAP44Q96MT7 982 aa15.6■□□□□ 0.09
APEX1-216ENST00000557159 MTERF4Q7Z6M4 381 aaKnown RBP15.59■□□□□ 0.09
APEX1-216ENST00000557159 BCL2L13Q9BXK5 485 aa15.59■□□□□ 0.09
APEX1-216ENST00000557159 CHMP4BQ9H444 224 aaKnown RBP15.59■□□□□ 0.09
APEX1-216ENST00000557159 CABP2Q9NPB3 220 aa15.59■□□□□ 0.09
APEX1-216ENST00000557159 IPO8O15397 1037 aaKnown RBP15.59■□□□□ 0.09
APEX1-216ENST00000557159 ZNF500O60304 480 aaPredicted RBP15.59■□□□□ 0.09
APEX1-216ENST00000557159 ZNF428Q96B54 188 aa15.59■□□□□ 0.09
APEX1-216ENST00000557159 RRP7AQ9Y3A4 280 aaKnown RBP15.59■□□□□ 0.09
APEX1-216ENST00000557159 MCM5P33992 734 aa15.58■□□□□ 0.08
APEX1-216ENST00000557159 C19orf44Q9H6X5 657 aa15.58■□□□□ 0.08
APEX1-216ENST00000557159 NEUROD2Q15784 382 aa15.57■□□□□ 0.08
APEX1-216ENST00000557159 ALDH1L2Q3SY69 923 aa15.57■□□□□ 0.08
APEX1-216ENST00000557159 PDLIM2Q96JY6 352 aa15.57■□□□□ 0.08
APEX1-216ENST00000557159 SMC4Q9NTJ3 1288 aa15.57■□□□□ 0.08
APEX1-216ENST00000557159 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.57■□□□□ 0.08
APEX1-216ENST00000557159 MSNP26038 577 aaKnown RBP15.57■□□□□ 0.08
APEX1-216ENST00000557159 MTHFSP49914 203 aa15.57■□□□□ 0.08
APEX1-216ENST00000557159 HDGFL2Q7Z4V5 671 aaPredicted RBP15.57■□□□□ 0.08
APEX1-216ENST00000557159 CHD1LQ86WJ1 897 aa15.57■□□□□ 0.08
APEX1-216ENST00000557159 GCC1Q96CN9 775 aa15.57■□□□□ 0.08
APEX1-216ENST00000557159 NOL7Q9UMY1 257 aaKnown RBP15.57■□□□□ 0.08
APEX1-216ENST00000557159 ADGRL3Q9HAR2 1447 aa15.56■□□□□ 0.08
APEX1-216ENST00000557159 MINK1Q8N4C8 1332 aaPredicted RBP15.56■□□□□ 0.08
APEX1-216ENST00000557159 C14orf37Q86TY3 774 aa15.56■□□□□ 0.08
APEX1-216ENST00000557159 XIRP1Q702N8 1843 aaKnown RBP15.56■□□□□ 0.08
APEX1-216ENST00000557159 ITPRIPQ8IWB1 547 aa15.55■□□□□ 0.08
APEX1-216ENST00000557159 SSH1Q8WYL5 1049 aa15.55■□□□□ 0.08
APEX1-216ENST00000557159 A0A1W2PP64 1363 aa15.55■□□□□ 0.08
APEX1-216ENST00000557159 PPIP5K1Q6PFW1 1433 aa15.55■□□□□ 0.08
APEX1-216ENST00000557159 CDK19Q9BWU1 502 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms