RNA–Protein interactions for RNA: ENST00000556830.1

LRP1-212, Transcript of LDL receptor related protein 1, humanhuman

TSL 2

Gene LRP1, Length 1,847 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-212ENST00000556830 ABCC11Q96J66 1382 aa15.8■□□□□ 0.12
LRP1-212ENST00000556830 IL16Q14005 1332 aa15.8■□□□□ 0.12
LRP1-212ENST00000556830 IPO8O15397 1037 aaKnown RBP15.8■□□□□ 0.12
LRP1-212ENST00000556830 ATF7IPQ6VMQ6 1270 aa15.8■□□□□ 0.12
LRP1-212ENST00000556830 CWC22Q9HCG8 908 aaKnown RBP15.8■□□□□ 0.12
LRP1-212ENST00000556830 ZBTB40Q9NUA8 1239 aa15.8■□□□□ 0.12
LRP1-212ENST00000556830 RBM10P98175 930 aaKnown RBP15.79■□□□□ 0.12
LRP1-212ENST00000556830 TMEM132EQ6IEE7 984 aa15.79■□□□□ 0.12
LRP1-212ENST00000556830 C14orf93Q9H972 538 aaKnown RBP15.79■□□□□ 0.12
LRP1-212ENST00000556830 SLC52A1Q9NWF4 448 aa15.79■□□□□ 0.12
LRP1-212ENST00000556830 MORC1Q86VD1 984 aa15.78■□□□□ 0.12
LRP1-212ENST00000556830 CHD1LQ86WJ1 897 aa15.78■□□□□ 0.12
LRP1-212ENST00000556830 GCC1Q96CN9 775 aa15.78■□□□□ 0.12
LRP1-212ENST00000556830 CCDC94Q9BW85 323 aaPredicted RBP15.78■□□□□ 0.12
LRP1-212ENST00000556830 NSD2O96028 1365 aa15.78■□□□□ 0.12
LRP1-212ENST00000556830 TRIM27P14373 513 aa15.78■□□□□ 0.12
LRP1-212ENST00000556830 SSFA2P28290 1259 aa15.78■□□□□ 0.12
LRP1-212ENST00000556830 ZSCAN23Q3MJ62 389 aa15.78■□□□□ 0.12
LRP1-212ENST00000556830 RABEP1Q15276 862 aa15.77■□□□□ 0.11
LRP1-212ENST00000556830 BCL2L13Q9BXK5 485 aa15.77■□□□□ 0.11
LRP1-212ENST00000556830 SMC4Q9NTJ3 1288 aa15.77■□□□□ 0.11
LRP1-212ENST00000556830 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.77■□□□□ 0.11
LRP1-212ENST00000556830 TRAK1Q9UPV9 953 aa15.77■□□□□ 0.11
LRP1-212ENST00000556830 SETD1AO15047 1707 aaKnown RBP15.77■□□□□ 0.11
LRP1-212ENST00000556830 CYP2E1P05181 493 aaPredicted RBP15.76■□□□□ 0.11
LRP1-212ENST00000556830 DMTNQ08495 405 aa15.76■□□□□ 0.11
LRP1-212ENST00000556830 ITPRIPQ8IWB1 547 aa15.76■□□□□ 0.11
LRP1-212ENST00000556830 ZFYVE9O95405 1425 aa15.76■□□□□ 0.11
LRP1-212ENST00000556830 ZNF428Q96B54 188 aa15.75■□□□□ 0.11
LRP1-212ENST00000556830 TNNT2P45379 298 aaPredicted RBP15.75■□□□□ 0.11
LRP1-212ENST00000556830 LMBRD1Q9NUN5 540 aa15.75■□□□□ 0.11
LRP1-212ENST00000556830 A2ML1A8K2U0 1454 aa15.74■□□□□ 0.11
LRP1-212ENST00000556830 HMGN5P82970 282 aaKnown RBP15.74■□□□□ 0.11
LRP1-212ENST00000556830 NEUROD2Q15784 382 aa15.74■□□□□ 0.11
LRP1-212ENST00000556830 ALDH1L2Q3SY69 923 aa15.74■□□□□ 0.11
LRP1-212ENST00000556830 PRIMPOLQ96LW4 560 aa15.74■□□□□ 0.11
LRP1-212ENST00000556830 GTPBP4Q9BZE4 634 aaKnown RBP15.74■□□□□ 0.11
LRP1-212ENST00000556830 NSD3Q9BZ95 1437 aa15.74■□□□□ 0.11
LRP1-212ENST00000556830 TULP4Q9NRJ4 1543 aa15.74■□□□□ 0.11
LRP1-212ENST00000556830 VGFO15240 615 aaPredicted RBP15.73■□□□□ 0.11
LRP1-212ENST00000556830 BRPF1P55201 1214 aaPredicted RBP15.73■□□□□ 0.11
LRP1-212ENST00000556830 GAS2L2Q8NHY3 880 aa15.73■□□□□ 0.11
LRP1-212ENST00000556830 PUS7Q96PZ0 661 aaKnown RBP15.73■□□□□ 0.11
LRP1-212ENST00000556830 RRP7AQ9Y3A4 280 aaKnown RBP15.73■□□□□ 0.11
LRP1-212ENST00000556830 ALKQ9UM73 1620 aa15.73■□□□□ 0.11
LRP1-212ENST00000556830 MED14O60244 1454 aa15.73■□□□□ 0.11
LRP1-212ENST00000556830 LRSAM1Q6UWE0 723 aa15.73■□□□□ 0.11
LRP1-212ENST00000556830 RBSNQ9H1K0 784 aa15.73■□□□□ 0.11
LRP1-212ENST00000556830 CDC45O75419 566 aa15.72■□□□□ 0.11
LRP1-212ENST00000556830 XPCQ01831 940 aaPredicted RBP15.72■□□□□ 0.11
LRP1-212ENST00000556830 CAVIN1Q6NZI2 390 aaKnown RBP15.72■□□□□ 0.11
LRP1-212ENST00000556830 MYRIPQ8NFW9 859 aa15.72■□□□□ 0.11
LRP1-212ENST00000556830 NRXN3Q9Y4C0 1643 aa15.72■□□□□ 0.11
LRP1-212ENST00000556830 FER1L4A9Z1Z3 1794 aa15.71■□□□□ 0.11
LRP1-212ENST00000556830 KIF20AO95235 890 aa15.71■□□□□ 0.11
LRP1-212ENST00000556830 MBD3O95983 291 aa15.71■□□□□ 0.11
LRP1-212ENST00000556830 UBR1Q8IWV7 1749 aa15.71■□□□□ 0.11
LRP1-212ENST00000556830 GTF2F1P35269 517 aaKnown RBP eCLIP15.71■□□□□ 0.1
LRP1-212ENST00000556830 TBC1D9Q6ZT07 1266 aa15.71■□□□□ 0.1
LRP1-212ENST00000556830 KLHL34Q8N239 644 aa15.71■□□□□ 0.1
LRP1-212ENST00000556830 CD2BP2O95400 341 aaKnown RBP15.7■□□□□ 0.1
LRP1-212ENST00000556830 KIAA2012Q0VF49 1180 aa15.7■□□□□ 0.1
LRP1-212ENST00000556830 MCTP1Q6DN14 999 aa15.7■□□□□ 0.1
LRP1-212ENST00000556830 SSH1Q8WYL5 1049 aa15.7■□□□□ 0.1
LRP1-212ENST00000556830 TMEM57Q8N5G2 664 aa15.69■□□□□ 0.1
LRP1-212ENST00000556830 LNPKQ9C0E8 428 aa15.69■□□□□ 0.1
LRP1-212ENST00000556830 STAG3Q9UJ98 1225 aa15.69■□□□□ 0.1
LRP1-212ENST00000556830 PTPRMP28827 1452 aa15.69■□□□□ 0.1
LRP1-212ENST00000556830 C3P01024 1663 aa15.69■□□□□ 0.1
LRP1-212ENST00000556830 PRIM1P49642 420 aaKnown RBP15.68■□□□□ 0.1
LRP1-212ENST00000556830 EXOSC9Q06265 439 aaKnown RBP15.68■□□□□ 0.1
LRP1-212ENST00000556830 NOB1Q9ULX3 412 aaKnown RBP15.68■□□□□ 0.1
LRP1-212ENST00000556830 RIMS2Q9UQ26 1411 aa15.68■□□□□ 0.1
LRP1-212ENST00000556830 PIK3R4Q99570 1358 aa15.68■□□□□ 0.1
LRP1-212ENST00000556830 KDM4FA0A1W2PPD8 638 aa15.67■□□□□ 0.1
LRP1-212ENST00000556830 MTHFSP49914 203 aa15.67■□□□□ 0.1
LRP1-212ENST00000556830 ARHGAP45Q92619 1136 aa15.67■□□□□ 0.1
LRP1-212ENST00000556830 LETM1O95202 739 aaPredicted RBP15.66■□□□□ 0.1
LRP1-212ENST00000556830 ESF1Q9H501 851 aaKnown RBP15.66■□□□□ 0.1
LRP1-212ENST00000556830 YTHDC2Q9H6S0 1430 aaKnown RBP15.66■□□□□ 0.1
LRP1-212ENST00000556830 ZSCAN20P17040 1043 aaPredicted RBP15.66■□□□□ 0.1
LRP1-212ENST00000556830 UVSSAQ2YD98 709 aa15.66■□□□□ 0.1
LRP1-212ENST00000556830 SYAP1Q96A49 352 aaPredicted RBP15.66■□□□□ 0.1
LRP1-212ENST00000556830 STK26Q9P289 416 aa15.66■□□□□ 0.1
LRP1-212ENST00000556830 SAFB2Q14151 953 aaKnown RBP eCLIP15.65■□□□□ 0.1
LRP1-212ENST00000556830 TAF3Q5VWG9 929 aa15.65■□□□□ 0.1
LRP1-212ENST00000556830 FAM184AQ8NB25 1140 aa15.65■□□□□ 0.1
LRP1-212ENST00000556830 PPIP5K1Q6PFW1 1433 aa15.65■□□□□ 0.1
LRP1-212ENST00000556830 TNRQ92752 1358 aa15.64■□□□□ 0.1
LRP1-212ENST00000556830 ST18O60284 1047 aa15.64■□□□□ 0.09
LRP1-212ENST00000556830 PHF14O94880 888 aa15.64■□□□□ 0.09
LRP1-212ENST00000556830 FOXD4L1Q9NU39 408 aa15.64■□□□□ 0.09
LRP1-212ENST00000556830 U2AF1L5P0DN76 240 aaPredicted RBP15.64■□□□□ 0.09
LRP1-212ENST00000556830 U2AF1Q01081 240 aaKnown RBP eCLIP15.64■□□□□ 0.09
LRP1-212ENST00000556830 KIF24Q5T7B8 1368 aa15.63■□□□□ 0.09
LRP1-212ENST00000556830 TMPOP42166 694 aaKnown RBP15.63■□□□□ 0.09
LRP1-212ENST00000556830 ANKRD45Q5TZF3 282 aa15.63■□□□□ 0.09
LRP1-212ENST00000556830 GPT2Q8TD30 523 aa15.62■□□□□ 0.09
LRP1-212ENST00000556830 TSR2Q969E8 191 aaKnown RBP15.62■□□□□ 0.09
LRP1-212ENST00000556830 PLEKHF1Q96S99 279 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms