RNA–Protein interactions for RNA: ENST00000556680.1

TRAV15-201, Transcript of T cell receptor alpha variable 15 (pseudogene), humanhuman

BASIC

Gene TRAV15, Length 249 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV15-201ENST00000556680 AEBP1Q8IUX7 1158 aa7.48□□□□□ -1.21
TRAV15-201ENST00000556680 PHTF2Q8N3S3 785 aa7.48□□□□□ -1.21
TRAV15-201ENST00000556680 PLPP7Q8NBV4 271 aa7.48□□□□□ -1.21
TRAV15-201ENST00000556680 GIGYF1O75420 1035 aaPredicted RBP7.47□□□□□ -1.21
TRAV15-201ENST00000556680 ATG7O95352 703 aa7.47□□□□□ -1.21
TRAV15-201ENST00000556680 CD2BP2O95400 341 aaKnown RBP7.47□□□□□ -1.21
TRAV15-201ENST00000556680 TRIM32Q13049 653 aa7.47□□□□□ -1.21
TRAV15-201ENST00000556680 C4orf48Q5BLP8 95 aa7.47□□□□□ -1.21
TRAV15-201ENST00000556680 KANK4Q5T7N3 995 aaPredicted RBP7.47□□□□□ -1.21
TRAV15-201ENST00000556680 PLEKHM2Q8IWE5 1019 aa7.47□□□□□ -1.21
TRAV15-201ENST00000556680 KCTD17Q8N5Z5 321 aa7.47□□□□□ -1.21
TRAV15-201ENST00000556680 MKRN1Q9UHC7 482 aaKnown RBP7.47□□□□□ -1.21
TRAV15-201ENST00000556680 NCOA4Q13772 614 aa7.46□□□□□ -1.22
TRAV15-201ENST00000556680 EML3Q32P44 896 aa7.46□□□□□ -1.22
TRAV15-201ENST00000556680 NBPF20Q3BBV1 942 aa7.46□□□□□ -1.22
TRAV15-201ENST00000556680 LARP1Q6PKG0 1096 aaKnown RBP7.46□□□□□ -1.22
TRAV15-201ENST00000556680 PODXL2Q9NZ53 605 aa7.46□□□□□ -1.22
TRAV15-201ENST00000556680 CDV3Q9UKY7 258 aaKnown RBP7.46□□□□□ -1.22
TRAV15-201ENST00000556680 RASA1P20936 1047 aa7.45□□□□□ -1.22
TRAV15-201ENST00000556680 VARSP26640 1264 aaKnown RBP7.45□□□□□ -1.22
TRAV15-201ENST00000556680 RPIAP49247 311 aa7.45□□□□□ -1.22
TRAV15-201ENST00000556680 WNT7BP56706 349 aa7.45□□□□□ -1.22
TRAV15-201ENST00000556680 TSGA10IPQ3SY00 556 aa7.45□□□□□ -1.22
TRAV15-201ENST00000556680 PLA2G2CQ5R387 149 aa7.45□□□□□ -1.22
TRAV15-201ENST00000556680 DOLKQ9UPQ8 538 aa7.45□□□□□ -1.22
TRAV15-201ENST00000556680 USTQ9Y2C2 406 aa7.45□□□□□ -1.22
TRAV15-201ENST00000556680 ATP5J2-PTCD1G3V325 749 aa7.44□□□□□ -1.22
TRAV15-201ENST00000556680 OXLD1Q5BKU9 147 aa7.44□□□□□ -1.22
TRAV15-201ENST00000556680 C1QTNF2Q9BXJ5 285 aa7.44□□□□□ -1.22
TRAV15-201ENST00000556680 NOD1Q9Y239 953 aa7.44□□□□□ -1.22
TRAV15-201ENST00000556680 RAB15P59190 212 aa7.43□□□□□ -1.22
TRAV15-201ENST00000556680 ARID5BQ14865 1188 aa7.43□□□□□ -1.22
TRAV15-201ENST00000556680 VASH1Q7L8A9 365 aaPredicted RBP7.43□□□□□ -1.22
TRAV15-201ENST00000556680 TRIM50Q86XT4 487 aa7.43□□□□□ -1.22
TRAV15-201ENST00000556680 TRMT44Q8IYL2 757 aaKnown RBP7.43□□□□□ -1.22
TRAV15-201ENST00000556680 EHBP1Q8NDI1 1231 aa7.43□□□□□ -1.22
TRAV15-201ENST00000556680 NOVA2Q9UNW9 492 aaKnown RBP7.43□□□□□ -1.22
TRAV15-201ENST00000556680 SKOR1P84550 965 aa7.42□□□□□ -1.22
TRAV15-201ENST00000556680 RC3H1Q5TC82 1133 aaKnown RBP7.42□□□□□ -1.22
TRAV15-201ENST00000556680 CCDC125Q86Z20 511 aa7.42□□□□□ -1.22
TRAV15-201ENST00000556680 SEPT12Q8IYM1 358 aa7.42□□□□□ -1.22
TRAV15-201ENST00000556680 SIRT1Q96EB6 747 aa7.42□□□□□ -1.22
TRAV15-201ENST00000556680 CCDC85AQ96PX6 553 aaPredicted RBP7.42□□□□□ -1.22
TRAV15-201ENST00000556680 KCTD15Q96SI1 283 aaPredicted RBP7.42□□□□□ -1.22
TRAV15-201ENST00000556680 ESF1Q9H501 851 aaKnown RBP7.42□□□□□ -1.22
TRAV15-201ENST00000556680 CHIC2Q9UKJ5 165 aa7.42□□□□□ -1.22
TRAV15-201ENST00000556680 PCDHB11Q9Y5F2 797 aa7.42□□□□□ -1.22
TRAV15-201ENST00000556680 CARNS1A5YM72 827 aa7.41□□□□□ -1.22
TRAV15-201ENST00000556680 FAM196BA6NMK8 535 aa7.41□□□□□ -1.22
TRAV15-201ENST00000556680 ATP1A2P50993 1020 aa7.41□□□□□ -1.22
TRAV15-201ENST00000556680 USP4Q13107 963 aa7.41□□□□□ -1.22
TRAV15-201ENST00000556680 MMRN1Q13201 1228 aa7.41□□□□□ -1.22
TRAV15-201ENST00000556680 ELOAQ14241 798 aaKnown RBP7.41□□□□□ -1.22
TRAV15-201ENST00000556680 TRAF7Q6Q0C0 670 aa7.41□□□□□ -1.22
TRAV15-201ENST00000556680 FAM200AQ8TCP9 573 aa7.41□□□□□ -1.22
TRAV15-201ENST00000556680 RBM19Q9Y4C8 960 aaKnown RBP7.41□□□□□ -1.22
TRAV15-201ENST00000556680 CCDC180Q9P1Z9 1646 aa7.41□□□□□ -1.22
TRAV15-201ENST00000556680 USP17L15C9J2P7 530 aa7.4□□□□□ -1.22
TRAV15-201ENST00000556680 USP17L10C9JJH3 530 aa7.4□□□□□ -1.22
TRAV15-201ENST00000556680 USP17L13C9JLJ4 530 aa7.4□□□□□ -1.22
TRAV15-201ENST00000556680 USP17L12C9JPN9 530 aa7.4□□□□□ -1.22
TRAV15-201ENST00000556680 USP17L11C9JVI0 530 aa7.4□□□□□ -1.22
TRAV15-201ENST00000556680 USP17L21D6R901 530 aa7.4□□□□□ -1.22
TRAV15-201ENST00000556680 USP17L18D6R9N7 530 aa7.4□□□□□ -1.22
TRAV15-201ENST00000556680 USP17L22D6RA61 530 aa7.4□□□□□ -1.22
TRAV15-201ENST00000556680 USP17L17D6RBQ6 530 aa7.4□□□□□ -1.22
TRAV15-201ENST00000556680 USP17L19D6RCP7 530 aa7.4□□□□□ -1.22
TRAV15-201ENST00000556680 USP17L20D6RJB6 530 aa7.4□□□□□ -1.22
TRAV15-201ENST00000556680 USP17L24Q0WX57 530 aa7.4□□□□□ -1.22
TRAV15-201ENST00000556680 CRTC2Q53ET0 693 aaPredicted RBP7.4□□□□□ -1.22
TRAV15-201ENST00000556680 LIAT1Q6ZQX7 453 aa7.4□□□□□ -1.22
TRAV15-201ENST00000556680 OGFOD1Q8N543 542 aa7.4□□□□□ -1.22
TRAV15-201ENST00000556680 DNAAF2Q9NVR5 837 aaKnown RBP7.4□□□□□ -1.22
TRAV15-201ENST00000556680 ESPNB1AK53 854 aa7.39□□□□□ -1.23
TRAV15-201ENST00000556680 SLC19A1P41440 591 aa7.39□□□□□ -1.23
TRAV15-201ENST00000556680 PTK7Q13308 1070 aa7.39□□□□□ -1.23
TRAV15-201ENST00000556680 TRIM52Q96A61 297 aa7.39□□□□□ -1.23
TRAV15-201ENST00000556680 ZNF594Q96JF6 807 aaPredicted RBP7.39□□□□□ -1.23
TRAV15-201ENST00000556680 CDCA7Q9BWT1 371 aaPredicted RBP7.39□□□□□ -1.23
TRAV15-201ENST00000556680 PATL2C9JE40 543 aaKnown RBP7.38□□□□□ -1.23
TRAV15-201ENST00000556680 BRD1O95696 1058 aa7.38□□□□□ -1.23
TRAV15-201ENST00000556680 MYCP01106 439 aaPredicted RBP7.38□□□□□ -1.23
TRAV15-201ENST00000556680 PSME1Q06323 249 aa7.38□□□□□ -1.23
TRAV15-201ENST00000556680 ANKMY2Q8IV38 441 aa7.38□□□□□ -1.23
TRAV15-201ENST00000556680 STK32AQ8WU08 396 aa7.38□□□□□ -1.23
TRAV15-201ENST00000556680 MAP4K5Q9Y4K4 846 aa7.38□□□□□ -1.23
TRAV15-201ENST00000556680 TMEM88BA6NKF7 163 aa7.37□□□□□ -1.23
TRAV15-201ENST00000556680 GTF2IP78347 998 aa7.37□□□□□ -1.23
TRAV15-201ENST00000556680 DPYDQ12882 1025 aa7.37□□□□□ -1.23
TRAV15-201ENST00000556680 TMEM164Q5U3C3 297 aa7.37□□□□□ -1.23
TRAV15-201ENST00000556680 LARGE2Q8N3Y3 721 aa7.37□□□□□ -1.23
TRAV15-201ENST00000556680 ZMIZ1Q9ULJ6 1067 aa7.37□□□□□ -1.23
TRAV15-201ENST00000556680 ERVH48-1M5A8F1 160 aa7.36□□□□□ -1.23
TRAV15-201ENST00000556680 CLDN10P78369 228 aa7.36□□□□□ -1.23
TRAV15-201ENST00000556680 INTS6LQ5JSJ4 861 aaKnown RBP7.36□□□□□ -1.23
TRAV15-201ENST00000556680 B4GALNT3Q6L9W6 998 aa7.36□□□□□ -1.23
TRAV15-201ENST00000556680 CDK15Q96Q40 435 aa7.36□□□□□ -1.23
TRAV15-201ENST00000556680 DHX9Q08211 1270 aaKnown RBP7.35□□□□□ -1.23
TRAV15-201ENST00000556680 IFFO2Q5TF58 517 aa7.35□□□□□ -1.23
TRAV15-201ENST00000556680 CCDC102BQ68D86 513 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms