RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 CNTROBQ8N137 903 aa21.09■□□□□ 0.97
PTPN21-208ENST00000556564 TMPOP42166 694 aaKnown RBP21.09■□□□□ 0.97
PTPN21-208ENST00000556564 NUP160Q12769 1436 aa21.08■□□□□ 0.97
PTPN21-208ENST00000556564 CEP170Q5SW79 1584 aa21.08■□□□□ 0.97
PTPN21-208ENST00000556564 CCT4P50991 539 aaKnown RBP21.08■□□□□ 0.97
PTPN21-208ENST00000556564 CHMP4CQ96CF2 233 aa21.08■□□□□ 0.97
PTPN21-208ENST00000556564 TOM1O60784 492 aa21.08■□□□□ 0.96
PTPN21-208ENST00000556564 IPO9Q96P70 1041 aaKnown RBP21.08■□□□□ 0.96
PTPN21-208ENST00000556564 MPHOSPH8Q99549 860 aa21.08■□□□□ 0.96
PTPN21-208ENST00000556564 KIAA2012Q0VF49 1180 aa21.08■□□□□ 0.96
PTPN21-208ENST00000556564 KDM4AO75164 1064 aa21.07■□□□□ 0.96
PTPN21-208ENST00000556564 CCDC184Q52MB2 194 aa21.07■□□□□ 0.96
PTPN21-208ENST00000556564 CCDC57Q2TAC2 916 aa21.07■□□□□ 0.96
PTPN21-208ENST00000556564 CCDC158Q5M9N0 1113 aa21.07■□□□□ 0.96
PTPN21-208ENST00000556564 RALYLQ86SE5 291 aaKnown RBP21.07■□□□□ 0.96
PTPN21-208ENST00000556564 EXOC5O00471 708 aa21.06■□□□□ 0.96
PTPN21-208ENST00000556564 GNL3LQ9NVN8 582 aaKnown RBP21.05■□□□□ 0.96
PTPN21-208ENST00000556564 PTPRKQ15262 1439 aa21.05■□□□□ 0.96
PTPN21-208ENST00000556564 C11orf95C9JLR9 678 aaPredicted RBP21.05■□□□□ 0.96
PTPN21-208ENST00000556564 ZPR1O75312 459 aa21.05■□□□□ 0.96
PTPN21-208ENST00000556564 ERC1Q8IUD2 1116 aa21.05■□□□□ 0.96
PTPN21-208ENST00000556564 ZMYM3Q14202 1370 aa21.04■□□□□ 0.96
PTPN21-208ENST00000556564 AMOTQ4VCS5 1084 aa21.04■□□□□ 0.96
PTPN21-208ENST00000556564 IKQ13123 557 aaPredicted RBP21.04■□□□□ 0.96
PTPN21-208ENST00000556564 RPRD2Q5VT52 1461 aaKnown RBP21.04■□□□□ 0.96
PTPN21-208ENST00000556564 RBM5P52756 815 aaKnown RBP eCLIP21.04■□□□□ 0.96
PTPN21-208ENST00000556564 SPINK5Q9NQ38 1064 aaPredicted RBP21.03■□□□□ 0.96
PTPN21-208ENST00000556564 MSNP26038 577 aaKnown RBP21.03■□□□□ 0.96
PTPN21-208ENST00000556564 STK11IPQ8N1F8 1099 aa21.03■□□□□ 0.96
PTPN21-208ENST00000556564 DISP3Q9P2K9 1392 aa21.03■□□□□ 0.96
PTPN21-208ENST00000556564 CHAF1AQ13111 956 aaPredicted RBP21.03■□□□□ 0.96
PTPN21-208ENST00000556564 DISP1Q96F81 1524 aa21.03■□□□□ 0.96
PTPN21-208ENST00000556564 MAP4K4O95819 1239 aaPredicted RBP21.03■□□□□ 0.96
PTPN21-208ENST00000556564 ANKRD24Q8TF21 1146 aa21.03■□□□□ 0.96
PTPN21-208ENST00000556564 ABCA5Q8WWZ7 1642 aa21.03■□□□□ 0.96
PTPN21-208ENST00000556564 DUSP27Q5VZP5 1158 aa21.02■□□□□ 0.96
PTPN21-208ENST00000556564 RTN4Q9NQC3 1192 aaKnown RBP21.02■□□□□ 0.95
PTPN21-208ENST00000556564 C8orf37Q96NL8 207 aa21.01■□□□□ 0.95
PTPN21-208ENST00000556564 PES1O00541 588 aaKnown RBP21.01■□□□□ 0.95
PTPN21-208ENST00000556564 FBLN1P23142 703 aa21.01■□□□□ 0.95
PTPN21-208ENST00000556564 WWC1Q8IX03 1113 aa21■□□□□ 0.95
PTPN21-208ENST00000556564 CDC45O75419 566 aa21■□□□□ 0.95
PTPN21-208ENST00000556564 RRP12Q5JTH9 1297 aaKnown RBP21■□□□□ 0.95
PTPN21-208ENST00000556564 NAP1L5Q96NT1 182 aaPredicted RBP21■□□□□ 0.95
PTPN21-208ENST00000556564 CFAP43Q8NDM7 1665 aa21■□□□□ 0.95
PTPN21-208ENST00000556564 TAF7Q15545 349 aaPredicted RBP20.99■□□□□ 0.95
PTPN21-208ENST00000556564 TSHZ2Q9NRE2 1034 aa20.99■□□□□ 0.95
PTPN21-208ENST00000556564 TPD52L1Q16890 204 aaPredicted RBP20.99■□□□□ 0.95
PTPN21-208ENST00000556564 PPIP5K1Q6PFW1 1433 aa20.99■□□□□ 0.95
PTPN21-208ENST00000556564 AAMPQ13685 434 aa20.99■□□□□ 0.95
PTPN21-208ENST00000556564 ZNF652Q9Y2D9 606 aa20.98■□□□□ 0.95
PTPN21-208ENST00000556564 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.98■□□□□ 0.95
PTPN21-208ENST00000556564 ATF7IPQ6VMQ6 1270 aa20.98■□□□□ 0.95
PTPN21-208ENST00000556564 MYD88Q99836 296 aa20.97■□□□□ 0.95
PTPN21-208ENST00000556564 PHF14O94880 888 aa20.97■□□□□ 0.95
PTPN21-208ENST00000556564 CABLES1Q8TDN4 633 aa20.97■□□□□ 0.95
PTPN21-208ENST00000556564 LRRCC1Q9C099 1032 aa20.96■□□□□ 0.95
PTPN21-208ENST00000556564 SRGAP3O43295 1099 aa20.96■□□□□ 0.95
PTPN21-208ENST00000556564 ATP6V1DQ9Y5K8 247 aa20.96■□□□□ 0.95
PTPN21-208ENST00000556564 IGHMBP2P38935 993 aaKnown RBP20.96■□□□□ 0.95
PTPN21-208ENST00000556564 PDE4CQ08493 712 aa20.96■□□□□ 0.95
PTPN21-208ENST00000556564 NPHP3Q7Z494 1330 aa20.96■□□□□ 0.95
PTPN21-208ENST00000556564 ATP2B2Q01814 1243 aa20.96■□□□□ 0.95
PTPN21-208ENST00000556564 FKBP4Q02790 459 aaKnown RBP eCLIP20.96■□□□□ 0.95
PTPN21-208ENST00000556564 ANO8Q9HCE9 1232 aaPredicted RBP20.96■□□□□ 0.95
PTPN21-208ENST00000556564 PDZRN3Q9UPQ7 1066 aa20.96■□□□□ 0.95
PTPN21-208ENST00000556564 VPS37CA5D8V6 355 aaPredicted RBP20.95■□□□□ 0.94
PTPN21-208ENST00000556564 LMTK3Q96Q04 1460 aa20.95■□□□□ 0.94
PTPN21-208ENST00000556564 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.95■□□□□ 0.94
PTPN21-208ENST00000556564 AACSQ86V21 672 aa20.95■□□□□ 0.94
PTPN21-208ENST00000556564 SMC3Q9UQE7 1217 aa20.94■□□□□ 0.94
PTPN21-208ENST00000556564 SLC3A2P08195 630 aaKnown RBP20.94■□□□□ 0.94
PTPN21-208ENST00000556564 CT47B1P0C2W7 299 aaPredicted RBP20.94■□□□□ 0.94
PTPN21-208ENST00000556564 ATP10AO60312 1499 aa20.94■□□□□ 0.94
PTPN21-208ENST00000556564 ACSBG1Q96GR2 724 aa20.93■□□□□ 0.94
PTPN21-208ENST00000556564 GCC1Q96CN9 775 aa20.93■□□□□ 0.94
PTPN21-208ENST00000556564 IFT57Q9NWB7 429 aa20.93■□□□□ 0.94
PTPN21-208ENST00000556564 TTC21BQ7Z4L5 1316 aa20.93■□□□□ 0.94
PTPN21-208ENST00000556564 PDE3AQ14432 1141 aa20.92■□□□□ 0.94
PTPN21-208ENST00000556564 ZNF219Q9P2Y4 722 aaPredicted RBP20.92■□□□□ 0.94
PTPN21-208ENST00000556564 IFNL2Q8IZJ0 200 aa20.92■□□□□ 0.94
PTPN21-208ENST00000556564 MVPQ14764 893 aaKnown RBP20.91■□□□□ 0.94
PTPN21-208ENST00000556564 CCDC43Q96MW1 224 aaKnown RBP20.91■□□□□ 0.94
PTPN21-208ENST00000556564 C22orf23Q9BZE7 217 aa20.91■□□□□ 0.94
PTPN21-208ENST00000556564 UHRF1BP1Q6BDS2 1440 aa20.91■□□□□ 0.94
PTPN21-208ENST00000556564 AK7Q96M32 723 aa20.91■□□□□ 0.94
PTPN21-208ENST00000556564 SART3Q15020 963 aaKnown RBP20.91■□□□□ 0.94
PTPN21-208ENST00000556564 HIP1O00291 1037 aa20.9■□□□□ 0.94
PTPN21-208ENST00000556564 PSMA5P28066 241 aa20.9■□□□□ 0.94
PTPN21-208ENST00000556564 SAFBQ15424 915 aaKnown RBP eCLIP20.9■□□□□ 0.94
PTPN21-208ENST00000556564 ATP7AQ04656 1500 aa20.9■□□□□ 0.94
PTPN21-208ENST00000556564 FMNL2Q96PY5 1086 aa20.9■□□□□ 0.94
PTPN21-208ENST00000556564 CEP126Q9P2H0 1117 aa20.9■□□□□ 0.94
PTPN21-208ENST00000556564 HMGB2P26583 209 aaKnown RBP20.89■□□□□ 0.94
PTPN21-208ENST00000556564 CCAR1Q8IX12 1150 aaKnown RBP20.89■□□□□ 0.94
PTPN21-208ENST00000556564 TCOF1Q13428 1488 aaKnown RBP20.89■□□□□ 0.93
PTPN21-208ENST00000556564 BCL11BQ9C0K0 894 aaPredicted RBP20.89■□□□□ 0.93
PTPN21-208ENST00000556564 IL1RAPL2Q9NP60 686 aa20.89■□□□□ 0.93
PTPN21-208ENST00000556564 SLFN5Q08AF3 891 aa20.89■□□□□ 0.93
PTPN21-208ENST00000556564 RAI14Q9P0K7 980 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms