RNA–Protein interactions for RNA: ENST00000556249.1

SDR39U1-217, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-217ENST00000556249 MYOM1P52179 1685 aa23■■□□□ 1.27
SDR39U1-217ENST00000556249 UTRNP46939 3433 aa22.99■■□□□ 1.27
SDR39U1-217ENST00000556249 NBPF1Q3BBV0 1214 aa22.99■■□□□ 1.27
SDR39U1-217ENST00000556249 AXIN2Q9Y2T1 843 aa22.99■■□□□ 1.27
SDR39U1-217ENST00000556249 RGPD3A6NKT7 1758 aaPredicted RBP22.97■■□□□ 1.27
SDR39U1-217ENST00000556249 RGPD4Q7Z3J3 1758 aa22.97■■□□□ 1.27
SDR39U1-217ENST00000556249 FHDC1Q9C0D6 1143 aaPredicted RBP22.97■■□□□ 1.27
SDR39U1-217ENST00000556249 AATKQ6ZMQ8 1374 aa22.97■■□□□ 1.27
SDR39U1-217ENST00000556249 TXNRD1Q16881 649 aa22.96■■□□□ 1.27
SDR39U1-217ENST00000556249 SYT17Q9BSW7 474 aa22.96■■□□□ 1.27
SDR39U1-217ENST00000556249 STK32BQ9NY57 414 aa22.95■■□□□ 1.26
SDR39U1-217ENST00000556249 CABP1Q9NZU7 370 aa22.95■■□□□ 1.26
SDR39U1-217ENST00000556249 SOX12O15370 315 aa22.93■■□□□ 1.26
SDR39U1-217ENST00000556249 SLC15A2Q16348 729 aa22.93■■□□□ 1.26
SDR39U1-217ENST00000556249 WDR17Q8IZU2 1322 aa22.92■■□□□ 1.26
SDR39U1-217ENST00000556249 SENP3-EIF4A1A0A087X0R7 540 aa22.92■■□□□ 1.26
SDR39U1-217ENST00000556249 SLIT3O75094 1523 aa22.91■■□□□ 1.26
SDR39U1-217ENST00000556249 COL18A1P39060 1754 aa22.91■■□□□ 1.26
SDR39U1-217ENST00000556249 USP6P35125 1406 aa22.91■■□□□ 1.26
SDR39U1-217ENST00000556249 CENPJQ9HC77 1338 aaPredicted RBP22.89■■□□□ 1.26
SDR39U1-217ENST00000556249 CSB-PGBD3P0DP91 1061 aa22.89■■□□□ 1.25
SDR39U1-217ENST00000556249 WNK3Q9BYP7 1800 aa22.88■■□□□ 1.25
SDR39U1-217ENST00000556249 MTFR1LQ9H019 292 aa22.88■■□□□ 1.25
SDR39U1-217ENST00000556249 AKAP12Q02952 1782 aa22.88■■□□□ 1.25
SDR39U1-217ENST00000556249 SGIP1Q9BQI5 828 aa22.87■■□□□ 1.25
SDR39U1-217ENST00000556249 CDCA7Q9BWT1 371 aaPredicted RBP22.87■■□□□ 1.25
SDR39U1-217ENST00000556249 BCL9O00512 1426 aa22.86■■□□□ 1.25
SDR39U1-217ENST00000556249 EXOC5O00471 708 aa22.86■■□□□ 1.25
SDR39U1-217ENST00000556249 ARHGEF25Q86VW2 580 aa22.86■■□□□ 1.25
SDR39U1-217ENST00000556249 ACSBG1Q96GR2 724 aa22.86■■□□□ 1.25
SDR39U1-217ENST00000556249 PIK3C2AO00443 1686 aa22.86■■□□□ 1.25
SDR39U1-217ENST00000556249 BRD4O60885 1362 aaPredicted RBP22.86■■□□□ 1.25
SDR39U1-217ENST00000556249 C1QTNF8P60827 252 aa22.85■■□□□ 1.25
SDR39U1-217ENST00000556249 CARD10Q9BWT7 1032 aa22.85■■□□□ 1.25
SDR39U1-217ENST00000556249 RGPD5Q99666 1765 aa22.85■■□□□ 1.25
SDR39U1-217ENST00000556249 CPSF1Q10570 1443 aaKnown RBP22.84■■□□□ 1.25
SDR39U1-217ENST00000556249 KIAA1210Q9ULL0 1709 aa22.84■■□□□ 1.25
SDR39U1-217ENST00000556249 ARXQ96QS3 562 aa22.83■■□□□ 1.25
SDR39U1-217ENST00000556249 QRICH2Q9H0J4 1663 aa22.81■■□□□ 1.24
SDR39U1-217ENST00000556249 CHD4Q14839 1912 aa22.8■■□□□ 1.24
SDR39U1-217ENST00000556249 TTC21BQ7Z4L5 1316 aa22.8■■□□□ 1.24
SDR39U1-217ENST00000556249 KCNH5Q8NCM2 988 aa22.79■■□□□ 1.24
SDR39U1-217ENST00000556249 GPR162Q16538 588 aa22.77■■□□□ 1.24
SDR39U1-217ENST00000556249 ZNF827Q17R98 1081 aa22.77■■□□□ 1.24
SDR39U1-217ENST00000556249 KLHL34Q8N239 644 aa22.77■■□□□ 1.24
SDR39U1-217ENST00000556249 TNS2Q63HR2 1409 aa22.76■■□□□ 1.23
SDR39U1-217ENST00000556249 CCDC7Q96M83 1385 aa22.75■■□□□ 1.23
SDR39U1-217ENST00000556249 PELP1Q8IZL8 1130 aaKnown RBP22.74■■□□□ 1.23
SDR39U1-217ENST00000556249 LRRC4BQ9NT99 713 aa22.74■■□□□ 1.23
SDR39U1-217ENST00000556249 EVC2Q86UK5 1308 aa22.74■■□□□ 1.23
SDR39U1-217ENST00000556249 NHSQ6T4R5 1651 aa22.74■■□□□ 1.23
SDR39U1-217ENST00000556249 CCER1Q8TC90 406 aaPredicted RBP22.72■■□□□ 1.23
SDR39U1-217ENST00000556249 ZNF692Q9BU19 519 aaPredicted RBP22.72■■□□□ 1.23
SDR39U1-217ENST00000556249 NLRP2Q9NX02 1062 aa22.72■■□□□ 1.23
SDR39U1-217ENST00000556249 NFAT5O94916 1531 aa22.72■■□□□ 1.23
SDR39U1-217ENST00000556249 PAPPAQ13219 1627 aa22.71■■□□□ 1.23
SDR39U1-217ENST00000556249 TRPM1Q7Z4N2 1603 aa22.71■■□□□ 1.23
SDR39U1-217ENST00000556249 MAP3K5Q99683 1374 aa22.7■■□□□ 1.22
SDR39U1-217ENST00000556249 TTC21AQ8NDW8 1320 aa22.69■■□□□ 1.22
SDR39U1-217ENST00000556249 GIGYF1O75420 1035 aaPredicted RBP22.69■■□□□ 1.22
SDR39U1-217ENST00000556249 BTAF1O14981 1849 aa22.68■■□□□ 1.22
SDR39U1-217ENST00000556249 IL2RBP14784 551 aa22.68■■□□□ 1.22
SDR39U1-217ENST00000556249 KCNQ4P56696 695 aa22.68■■□□□ 1.22
SDR39U1-217ENST00000556249 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.68■■□□□ 1.22
SDR39U1-217ENST00000556249 KAT6BQ8WYB5 2073 aa22.67■■□□□ 1.22
SDR39U1-217ENST00000556249 KTN1Q86UP2 1357 aaKnown RBP22.67■■□□□ 1.22
SDR39U1-217ENST00000556249 ABCC6O95255 1503 aa22.67■■□□□ 1.22
SDR39U1-217ENST00000556249 ERBB3P21860 1342 aa22.66■■□□□ 1.22
SDR39U1-217ENST00000556249 CLSPNQ9HAW4 1339 aa22.66■■□□□ 1.22
SDR39U1-217ENST00000556249 NLGN2Q8NFZ4 835 aa22.66■■□□□ 1.22
SDR39U1-217ENST00000556249 AKT1S1Q96B36 256 aa22.66■■□□□ 1.22
SDR39U1-217ENST00000556249 IFFO2Q5TF58 517 aa22.65■■□□□ 1.22
SDR39U1-217ENST00000556249 PNPLA7Q6ZV29 1317 aa22.63■■□□□ 1.21
SDR39U1-217ENST00000556249 GOLGB1Q14789 3259 aaKnown RBP22.63■■□□□ 1.21
SDR39U1-217ENST00000556249 POLD1P28340 1107 aa22.63■■□□□ 1.21
SDR39U1-217ENST00000556249 NME9Q86XW9 330 aa22.63■■□□□ 1.21
SDR39U1-217ENST00000556249 ANKRD24Q8TF21 1146 aa22.63■■□□□ 1.21
SDR39U1-217ENST00000556249 L3MBTL2Q969R5 705 aa22.63■■□□□ 1.21
SDR39U1-217ENST00000556249 DDX54Q8TDD1 881 aaKnown RBP22.62■■□□□ 1.21
SDR39U1-217ENST00000556249 TFCP2L1Q9NZI6 479 aa22.61■■□□□ 1.21
SDR39U1-217ENST00000556249 SLC16A10Q8TF71 515 aa22.6■■□□□ 1.21
SDR39U1-217ENST00000556249 SYTL4Q96C24 671 aaPredicted RBP22.59■■□□□ 1.21
SDR39U1-217ENST00000556249 SHANK3Q9BYB0 1731 aa22.58■■□□□ 1.21
SDR39U1-217ENST00000556249 YBX3P16989 372 aaKnown RBP eCLIP22.58■■□□□ 1.21
SDR39U1-217ENST00000556249 SLC27A3Q5K4L6 730 aa22.57■■□□□ 1.2
SDR39U1-217ENST00000556249 LTV1Q96GA3 475 aaPredicted RBP22.57■■□□□ 1.2
SDR39U1-217ENST00000556249 USP31Q70CQ4 1352 aa22.57■■□□□ 1.2
SDR39U1-217ENST00000556249 LTN1O94822 1766 aa22.57■■□□□ 1.2
SDR39U1-217ENST00000556249 ROCK2O75116 1388 aaKnown RBP22.55■■□□□ 1.2
SDR39U1-217ENST00000556249 PRIM1P49642 420 aaKnown RBP22.55■■□□□ 1.2
SDR39U1-217ENST00000556249 MON2Q7Z3U7 1717 aa22.54■■□□□ 1.2
SDR39U1-217ENST00000556249 TMC1Q8TDI8 760 aa22.54■■□□□ 1.2
SDR39U1-217ENST00000556249 TUBGCP6Q96RT7 1819 aa22.54■■□□□ 1.2
SDR39U1-217ENST00000556249 SBNO2Q9Y2G9 1366 aa22.53■■□□□ 1.2
SDR39U1-217ENST00000556249 MSH5O43196 834 aa22.53■■□□□ 1.2
SDR39U1-217ENST00000556249 SIN3AQ96ST3 1273 aa22.53■■□□□ 1.2
SDR39U1-217ENST00000556249 COL24A1Q17RW2 1714 aa22.52■■□□□ 1.2
SDR39U1-217ENST00000556249 CD163L1Q9NR16 1453 aa22.52■■□□□ 1.2
SDR39U1-217ENST00000556249 QSER1Q2KHR3 1735 aa22.51■■□□□ 1.19
SDR39U1-217ENST00000556249 CEP350Q5VT06 3117 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms