RNA–Protein interactions for RNA: ENST00000555962.5

CHD8-210, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 1,232 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-210ENST00000555962 CARD14Q9BXL6 1004 aa12.44□□□□□ -0.42
CHD8-210ENST00000555962 USP19O94966 1318 aa12.43□□□□□ -0.42
CHD8-210ENST00000555962 NME9Q86XW9 330 aa12.43□□□□□ -0.42
CHD8-210ENST00000555962 ZRANB1Q9UGI0 708 aa12.43□□□□□ -0.42
CHD8-210ENST00000555962 LTN1O94822 1766 aa12.43□□□□□ -0.42
CHD8-210ENST00000555962 RGPD5Q99666 1765 aa12.43□□□□□ -0.42
CHD8-210ENST00000555962 ANKRD26Q9UPS8 1709 aa12.42□□□□□ -0.42
CHD8-210ENST00000555962 NLRP6P59044 892 aa12.42□□□□□ -0.42
CHD8-210ENST00000555962 MEX3CQ5U5Q3 659 aaKnown RBP12.42□□□□□ -0.42
CHD8-210ENST00000555962 COL14A1Q05707 1796 aaKnown RBP12.42□□□□□ -0.42
CHD8-210ENST00000555962 NSD3Q9BZ95 1437 aa12.42□□□□□ -0.42
CHD8-210ENST00000555962 NWD2Q9ULI1 1742 aa12.42□□□□□ -0.42
CHD8-210ENST00000555962 OVOS2A0A0J9YW53 1432 aa12.41□□□□□ -0.42
CHD8-210ENST00000555962 OVOS2Q6IE36 1432 aa12.41□□□□□ -0.42
CHD8-210ENST00000555962 NRAPQ86VF7 1730 aa12.41□□□□□ -0.42
CHD8-210ENST00000555962 NLRP13Q86W25 1043 aa12.41□□□□□ -0.42
CHD8-210ENST00000555962 RGS17Q9UGC6 210 aaPredicted RBP12.41□□□□□ -0.42
CHD8-210ENST00000555962 USP31Q70CQ4 1352 aa12.41□□□□□ -0.42
CHD8-210ENST00000555962 COL18A1P39060 1754 aa12.41□□□□□ -0.42
CHD8-210ENST00000555962 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.4□□□□□ -0.42
CHD8-210ENST00000555962 GSE1Q14687 1217 aa12.4□□□□□ -0.42
CHD8-210ENST00000555962 C8orf37Q96NL8 207 aa12.4□□□□□ -0.42
CHD8-210ENST00000555962 PANK3Q9H999 370 aa12.4□□□□□ -0.42
CHD8-210ENST00000555962 NFAT5O94916 1531 aa12.4□□□□□ -0.42
CHD8-210ENST00000555962 LMO7Q8WWI1 1683 aa12.39□□□□□ -0.43
CHD8-210ENST00000555962 MAP2P11137 1827 aaKnown RBP12.39□□□□□ -0.43
CHD8-210ENST00000555962 AFF2P51816 1311 aa12.38□□□□□ -0.43
CHD8-210ENST00000555962 SLIT2O94813 1529 aa12.38□□□□□ -0.43
CHD8-210ENST00000555962 FYB1O15117 783 aa12.38□□□□□ -0.43
CHD8-210ENST00000555962 GCP02774 474 aa12.38□□□□□ -0.43
CHD8-210ENST00000555962 ZC3H6P61129 1189 aaKnown RBP12.38□□□□□ -0.43
CHD8-210ENST00000555962 HS6ST3Q8IZP7 471 aa12.38□□□□□ -0.43
CHD8-210ENST00000555962 NGLY1Q96IV0 654 aa12.38□□□□□ -0.43
CHD8-210ENST00000555962 KIAA0232Q92628 1395 aa12.38□□□□□ -0.43
CHD8-210ENST00000555962 FAM83GA6ND36 823 aa12.37□□□□□ -0.43
CHD8-210ENST00000555962 GGNBP2Q9H3C7 697 aa12.37□□□□□ -0.43
CHD8-210ENST00000555962 BCL9LQ86UU0 1499 aa12.37□□□□□ -0.43
CHD8-210ENST00000555962 CPDO75976 1380 aa12.36□□□□□ -0.43
CHD8-210ENST00000555962 SOX12O15370 315 aa12.36□□□□□ -0.43
CHD8-210ENST00000555962 CHRNA2Q15822 529 aa12.36□□□□□ -0.43
CHD8-210ENST00000555962 FNBP4Q8N3X1 1017 aaPredicted RBP12.36□□□□□ -0.43
CHD8-210ENST00000555962 CAMTA1Q9Y6Y1 1673 aa12.35□□□□□ -0.43
CHD8-210ENST00000555962 TPRNQ4KMQ1 711 aa12.35□□□□□ -0.43
CHD8-210ENST00000555962 POTEAQ6S8J7 498 aa12.35□□□□□ -0.43
CHD8-210ENST00000555962 PRDM11Q9NQV5 511 aa12.35□□□□□ -0.43
CHD8-210ENST00000555962 FBLN1P23142 703 aa12.34□□□□□ -0.43
CHD8-210ENST00000555962 COG3Q96JB2 828 aa12.34□□□□□ -0.43
CHD8-210ENST00000555962 USP21Q9UK80 565 aa12.34□□□□□ -0.43
CHD8-210ENST00000555962 CGNL1Q0VF96 1302 aa12.34□□□□□ -0.43
CHD8-210ENST00000555962 PEAK1Q9H792 1746 aa12.34□□□□□ -0.43
CHD8-210ENST00000555962 ZBTB7CA1YPR0 619 aa12.33□□□□□ -0.44
CHD8-210ENST00000555962 PER1O15534 1290 aaPredicted RBP12.33□□□□□ -0.44
CHD8-210ENST00000555962 NUBP1P53384 320 aa12.33□□□□□ -0.44
CHD8-210ENST00000555962 ZNF772Q68DY9 489 aaPredicted RBP12.33□□□□□ -0.44
CHD8-210ENST00000555962 ARHGEF25Q86VW2 580 aa12.33□□□□□ -0.44
CHD8-210ENST00000555962 KCNH5Q8NCM2 988 aa12.33□□□□□ -0.44
CHD8-210ENST00000555962 BTG4Q9NY30 223 aa12.33□□□□□ -0.44
CHD8-210ENST00000555962 GLI3P10071 1580 aa12.32□□□□□ -0.44
CHD8-210ENST00000555962 ATRNO75882 1429 aa12.32□□□□□ -0.44
CHD8-210ENST00000555962 DCAF8Q5TAQ9 597 aa12.32□□□□□ -0.44
CHD8-210ENST00000555962 RNF25Q96BH1 459 aaPredicted RBP12.32□□□□□ -0.44
CHD8-210ENST00000555962 RGPD2P0DJD1 1756 aa12.32□□□□□ -0.44
CHD8-210ENST00000555962 AATKQ6ZMQ8 1374 aa12.31□□□□□ -0.44
CHD8-210ENST00000555962 UNC5CLQ8IV45 518 aa12.31□□□□□ -0.44
CHD8-210ENST00000555962 SPDYE1Q8NFV5 336 aaPredicted RBP12.31□□□□□ -0.44
CHD8-210ENST00000555962 KNSTRNQ9Y448 316 aa12.31□□□□□ -0.44
CHD8-210ENST00000555962 ABCC6O95255 1503 aa12.31□□□□□ -0.44
CHD8-210ENST00000555962 COL5A2P05997 1499 aaPredicted RBP12.3□□□□□ -0.44
CHD8-210ENST00000555962 QTRT2Q9H974 415 aaKnown RBP12.3□□□□□ -0.44
CHD8-210ENST00000555962 AXIN2Q9Y2T1 843 aa12.3□□□□□ -0.44
CHD8-210ENST00000555962 NSD2O96028 1365 aa12.3□□□□□ -0.44
CHD8-210ENST00000555962 TRPC5Q9UL62 973 aaPredicted RBP12.29□□□□□ -0.44
CHD8-210ENST00000555962 BRWD3Q6RI45 1802 aa12.29□□□□□ -0.44
CHD8-210ENST00000555962 WNK3Q9BYP7 1800 aa12.29□□□□□ -0.44
CHD8-210ENST00000555962 MAP3K19Q56UN5 1328 aa12.29□□□□□ -0.44
CHD8-210ENST00000555962 RRS1Q15050 365 aaKnown RBP12.28□□□□□ -0.44
CHD8-210ENST00000555962 ILDR2Q71H61 639 aa12.28□□□□□ -0.44
CHD8-210ENST00000555962 FAM208AQ9UK61 1670 aaKnown RBP12.27□□□□□ -0.45
CHD8-210ENST00000555962 RIOK3O14730 519 aaKnown RBP12.27□□□□□ -0.45
CHD8-210ENST00000555962 VPS72Q15906 364 aa12.27□□□□□ -0.45
CHD8-210ENST00000555962 STRN4Q9NRL3 753 aa12.27□□□□□ -0.45
CHD8-210ENST00000555962 TNNT2P45379 298 aaPredicted RBP12.26□□□□□ -0.45
CHD8-210ENST00000555962 RBM6P78332 1123 aaKnown RBP12.26□□□□□ -0.45
CHD8-210ENST00000555962 DDX10Q13206 875 aaKnown RBP12.26□□□□□ -0.45
CHD8-210ENST00000555962 CC2D1BQ5T0F9 858 aaKnown RBP12.26□□□□□ -0.45
CHD8-210ENST00000555962 LARP1Q6PKG0 1096 aaKnown RBP12.26□□□□□ -0.45
CHD8-210ENST00000555962 EMILIN1Q9Y6C2 1016 aa12.26□□□□□ -0.45
CHD8-210ENST00000555962 NPC1L1Q9UHC9 1359 aa12.26□□□□□ -0.45
CHD8-210ENST00000555962 ZNF316A6NFI3 1004 aaPredicted RBP12.25□□□□□ -0.45
CHD8-210ENST00000555962 RXRBP28702 533 aa12.25□□□□□ -0.45
CHD8-210ENST00000555962 HOXC9P31274 260 aa12.25□□□□□ -0.45
CHD8-210ENST00000555962 CNGB1Q14028 1251 aaPredicted RBP12.25□□□□□ -0.45
CHD8-210ENST00000555962 MORC1Q86VD1 984 aa12.25□□□□□ -0.45
CHD8-210ENST00000555962 IP6K1Q92551 441 aa12.25□□□□□ -0.45
CHD8-210ENST00000555962 GJD4Q96KN9 370 aaPredicted RBP12.25□□□□□ -0.45
CHD8-210ENST00000555962 CCDC9Q9Y3X0 531 aaKnown RBP12.25□□□□□ -0.45
CHD8-210ENST00000555962 SPATA31A5Q5VU36 1347 aa12.25□□□□□ -0.45
CHD8-210ENST00000555962 SPATA31A7Q8IWB4 1347 aa12.25□□□□□ -0.45
CHD8-210ENST00000555962 RTL1A6NKG5 1358 aa12.24□□□□□ -0.45
CHD8-210ENST00000555962 RGS12O14924 1447 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms