RNA–Protein interactions for RNA: ENST00000555573.5

KTN1-223, Transcript of kinectin 1, humanhuman

TSL 2 BASIC

Gene KTN1, Length 1,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-223ENST00000555573 PLEKHM2Q8IWE5 1019 aa8.63□□□□□ -1.03
KTN1-223ENST00000555573 PLPP7Q8NBV4 271 aa8.63□□□□□ -1.03
KTN1-223ENST00000555573 SLC10A4Q96EP9 437 aa8.63□□□□□ -1.03
KTN1-223ENST00000555573 VRTNQ9H8Y1 702 aa8.63□□□□□ -1.03
KTN1-223ENST00000555573 TRIM26Q12899 539 aaPredicted RBP8.62□□□□□ -1.03
KTN1-223ENST00000555573 CHIC2Q9UKJ5 165 aa8.62□□□□□ -1.03
KTN1-223ENST00000555573 ATG7O95352 703 aa8.61□□□□□ -1.03
KTN1-223ENST00000555573 NCOA4Q13772 614 aa8.61□□□□□ -1.03
KTN1-223ENST00000555573 WNT7BP56706 349 aa8.6□□□□□ -1.03
KTN1-223ENST00000555573 TRMT44Q8IYL2 757 aaKnown RBP8.6□□□□□ -1.03
KTN1-223ENST00000555573 CCDC85AQ96PX6 553 aaPredicted RBP8.6□□□□□ -1.03
KTN1-223ENST00000555573 RPIAP49247 311 aa8.6□□□□□ -1.03
KTN1-223ENST00000555573 TRAF7Q6Q0C0 670 aa8.6□□□□□ -1.03
KTN1-223ENST00000555573 EMID1Q96A84 441 aaPredicted RBP8.6□□□□□ -1.03
KTN1-223ENST00000555573 CARNS1A5YM72 827 aa8.59□□□□□ -1.03
KTN1-223ENST00000555573 CSB-PGBD3P0DP91 1061 aa8.59□□□□□ -1.03
KTN1-223ENST00000555573 NBPF20Q3BBV1 942 aa8.59□□□□□ -1.03
KTN1-223ENST00000555573 MAP7D1Q3KQU3 841 aa8.59□□□□□ -1.03
KTN1-223ENST00000555573 LIAT1Q6ZQX7 453 aa8.59□□□□□ -1.03
KTN1-223ENST00000555573 MKRN1Q9UHC7 482 aaKnown RBP8.59□□□□□ -1.03
KTN1-223ENST00000555573 VARSP26640 1264 aaKnown RBP8.58□□□□□ -1.04
KTN1-223ENST00000555573 PLA2G2EQ9NZK7 142 aa8.58□□□□□ -1.04
KTN1-223ENST00000555573 ESPNB1AK53 854 aa8.57□□□□□ -1.04
KTN1-223ENST00000555573 DOLKQ9UPQ8 538 aa8.57□□□□□ -1.04
KTN1-223ENST00000555573 EML3Q32P44 896 aa8.57□□□□□ -1.04
KTN1-223ENST00000555573 CDV3Q9UKY7 258 aaKnown RBP8.57□□□□□ -1.04
KTN1-223ENST00000555573 ZMIZ1Q9ULJ6 1067 aa8.57□□□□□ -1.04
KTN1-223ENST00000555573 USTQ9Y2C2 406 aa8.57□□□□□ -1.04
KTN1-223ENST00000555573 LZTS3O60299 673 aaPredicted RBP8.56□□□□□ -1.04
KTN1-223ENST00000555573 CD2BP2O95400 341 aaKnown RBP8.56□□□□□ -1.04
KTN1-223ENST00000555573 CRTC2Q53ET0 693 aaPredicted RBP8.56□□□□□ -1.04
KTN1-223ENST00000555573 OXLD1Q5BKU9 147 aa8.56□□□□□ -1.04
KTN1-223ENST00000555573 RC3H1Q5TC82 1133 aaKnown RBP8.56□□□□□ -1.04
KTN1-223ENST00000555573 RNF20Q5VTR2 975 aa8.56□□□□□ -1.04
KTN1-223ENST00000555573 EHBP1Q8NDI1 1231 aa8.56□□□□□ -1.04
KTN1-223ENST00000555573 KCTD15Q96SI1 283 aaPredicted RBP8.56□□□□□ -1.04
KTN1-223ENST00000555573 CDCA7Q9BWT1 371 aaPredicted RBP8.56□□□□□ -1.04
KTN1-223ENST00000555573 RASA1P20936 1047 aa8.55□□□□□ -1.04
KTN1-223ENST00000555573 RAB15P59190 212 aa8.55□□□□□ -1.04
KTN1-223ENST00000555573 IFFO2Q5TF58 517 aa8.55□□□□□ -1.04
KTN1-223ENST00000555573 NOVA2Q9UNW9 492 aaKnown RBP8.55□□□□□ -1.04
KTN1-223ENST00000555573 TMEM88BA6NKF7 163 aa8.54□□□□□ -1.04
KTN1-223ENST00000555573 FAM196BA6NMK8 535 aa8.54□□□□□ -1.04
KTN1-223ENST00000555573 USP17L15C9J2P7 530 aa8.54□□□□□ -1.04
KTN1-223ENST00000555573 USP17L10C9JJH3 530 aa8.54□□□□□ -1.04
KTN1-223ENST00000555573 USP17L13C9JLJ4 530 aa8.54□□□□□ -1.04
KTN1-223ENST00000555573 USP17L12C9JPN9 530 aa8.54□□□□□ -1.04
KTN1-223ENST00000555573 USP17L11C9JVI0 530 aa8.54□□□□□ -1.04
KTN1-223ENST00000555573 USP17L21D6R901 530 aa8.54□□□□□ -1.04
KTN1-223ENST00000555573 USP17L18D6R9N7 530 aa8.54□□□□□ -1.04
KTN1-223ENST00000555573 USP17L22D6RA61 530 aa8.54□□□□□ -1.04
KTN1-223ENST00000555573 USP17L17D6RBQ6 530 aa8.54□□□□□ -1.04
KTN1-223ENST00000555573 USP17L19D6RCP7 530 aa8.54□□□□□ -1.04
KTN1-223ENST00000555573 USP17L20D6RJB6 530 aa8.54□□□□□ -1.04
KTN1-223ENST00000555573 ATP5J2-PTCD1G3V325 749 aa8.54□□□□□ -1.04
KTN1-223ENST00000555573 PDE4CQ08493 712 aa8.54□□□□□ -1.04
KTN1-223ENST00000555573 USP17L24Q0WX57 530 aa8.54□□□□□ -1.04
KTN1-223ENST00000555573 VASH1Q7L8A9 365 aaPredicted RBP8.54□□□□□ -1.04
KTN1-223ENST00000555573 STK32AQ8WU08 396 aa8.54□□□□□ -1.04
KTN1-223ENST00000555573 PCDHB11Q9Y5F2 797 aa8.54□□□□□ -1.04
KTN1-223ENST00000555573 CLDN10P78369 228 aa8.54□□□□□ -1.04
KTN1-223ENST00000555573 PTK7Q13308 1070 aa8.54□□□□□ -1.04
KTN1-223ENST00000555573 ELOAQ14241 798 aaKnown RBP8.54□□□□□ -1.04
KTN1-223ENST00000555573 ARID5BQ14865 1188 aa8.54□□□□□ -1.04
KTN1-223ENST00000555573 SEPT12Q8IYM1 358 aa8.54□□□□□ -1.04
KTN1-223ENST00000555573 MAP4K5Q9Y4K4 846 aa8.54□□□□□ -1.04
KTN1-223ENST00000555573 SLC19A1P41440 591 aa8.53□□□□□ -1.04
KTN1-223ENST00000555573 INTS6LQ5JSJ4 861 aaKnown RBP8.53□□□□□ -1.04
KTN1-223ENST00000555573 LARP1Q6PKG0 1096 aaKnown RBP8.53□□□□□ -1.04
KTN1-223ENST00000555573 AEBP1Q8IUX7 1158 aa8.53□□□□□ -1.04
KTN1-223ENST00000555573 OGFOD1Q8N543 542 aa8.53□□□□□ -1.04
KTN1-223ENST00000555573 NOD1Q9Y239 953 aa8.53□□□□□ -1.04
KTN1-223ENST00000555573 TMEM164Q5U3C3 297 aa8.52□□□□□ -1.05
KTN1-223ENST00000555573 PODXL2Q9NZ53 605 aa8.52□□□□□ -1.05
KTN1-223ENST00000555573 TLL2Q9Y6L7 1015 aa8.52□□□□□ -1.05
KTN1-223ENST00000555573 KCTD17Q8N5Z5 321 aa8.51□□□□□ -1.05
KTN1-223ENST00000555573 ZNF594Q96JF6 807 aaPredicted RBP8.51□□□□□ -1.05
KTN1-223ENST00000555573 CDK15Q96Q40 435 aa8.51□□□□□ -1.05
KTN1-223ENST00000555573 ZBTB7CA1YPR0 619 aa8.51□□□□□ -1.05
KTN1-223ENST00000555573 ERVH48-1M5A8F1 160 aa8.51□□□□□ -1.05
KTN1-223ENST00000555573 SIAH2O43255 324 aa8.51□□□□□ -1.05
KTN1-223ENST00000555573 TRIM50Q86XT4 487 aa8.51□□□□□ -1.05
KTN1-223ENST00000555573 IRX2Q9BZI1 471 aaPredicted RBP8.51□□□□□ -1.05
KTN1-223ENST00000555573 KIAA1024Q9UPX6 916 aa8.51□□□□□ -1.05
KTN1-223ENST00000555573 FSHRP23945 695 aa8.5□□□□□ -1.05
KTN1-223ENST00000555573 GRM5P41594 1212 aa8.5□□□□□ -1.05
KTN1-223ENST00000555573 GTF2IP78347 998 aa8.5□□□□□ -1.05
KTN1-223ENST00000555573 DNAAF2Q9NVR5 837 aaKnown RBP8.5□□□□□ -1.05
KTN1-223ENST00000555573 WNT7AO00755 349 aa8.49□□□□□ -1.05
KTN1-223ENST00000555573 CCDC125Q86Z20 511 aa8.49□□□□□ -1.05
KTN1-223ENST00000555573 ANKMY2Q8IV38 441 aa8.49□□□□□ -1.05
KTN1-223ENST00000555573 MRGPRX2Q96LB1 330 aa8.49□□□□□ -1.05
KTN1-223ENST00000555573 ZBTB7BO15156 539 aaPredicted RBP8.49□□□□□ -1.05
KTN1-223ENST00000555573 SCTRP47872 440 aa8.49□□□□□ -1.05
KTN1-223ENST00000555573 ATP1A2P50993 1020 aa8.49□□□□□ -1.05
KTN1-223ENST00000555573 USP4Q13107 963 aa8.49□□□□□ -1.05
KTN1-223ENST00000555573 SPRYD7Q5W111 196 aa8.49□□□□□ -1.05
KTN1-223ENST00000555573 PCDHGA11Q9Y5H2 935 aa8.49□□□□□ -1.05
KTN1-223ENST00000555573 RGS20O76081 388 aa8.48□□□□□ -1.05
KTN1-223ENST00000555573 DPYDQ12882 1025 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms