RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 HDAC1Q13547 482 aaPredicted RBP19.31■□□□□ 0.68
SYNE3-203ENST00000554873 ARHGAP31Q2M1Z3 1444 aa19.3■□□□□ 0.68
SYNE3-203ENST00000554873 CD109Q6YHK3 1445 aa19.3■□□□□ 0.68
SYNE3-203ENST00000554873 RBSNQ9H1K0 784 aa19.3■□□□□ 0.68
SYNE3-203ENST00000554873 GLI2P10070 1586 aa19.29■□□□□ 0.68
SYNE3-203ENST00000554873 VGFO15240 615 aaPredicted RBP19.29■□□□□ 0.68
SYNE3-203ENST00000554873 ITPRIPQ8IWB1 547 aa19.29■□□□□ 0.68
SYNE3-203ENST00000554873 GGNBP2Q9H3C7 697 aa19.29■□□□□ 0.68
SYNE3-203ENST00000554873 ATF7IPQ6VMQ6 1270 aa19.29■□□□□ 0.68
SYNE3-203ENST00000554873 ZNF710Q8N1W2 664 aa19.29■□□□□ 0.68
SYNE3-203ENST00000554873 DDX19BQ9UMR2 479 aa19.29■□□□□ 0.68
SYNE3-203ENST00000554873 NOB1Q9ULX3 412 aaKnown RBP19.28■□□□□ 0.68
SYNE3-203ENST00000554873 ZSCAN23Q3MJ62 389 aa19.28■□□□□ 0.68
SYNE3-203ENST00000554873 PRIMPOLQ96LW4 560 aa19.28■□□□□ 0.68
SYNE3-203ENST00000554873 FRMPD1Q5SYB0 1578 aa19.27■□□□□ 0.68
SYNE3-203ENST00000554873 BAG4O95429 457 aaKnown RBP19.27■□□□□ 0.67
SYNE3-203ENST00000554873 SSFA2P28290 1259 aa19.27■□□□□ 0.67
SYNE3-203ENST00000554873 A0A1W2PP64 1363 aa19.26■□□□□ 0.67
SYNE3-203ENST00000554873 GTF2F1P35269 517 aaKnown RBP eCLIP19.26■□□□□ 0.67
SYNE3-203ENST00000554873 ARHGEF28Q8N1W1 1705 aaKnown RBP19.26■□□□□ 0.67
SYNE3-203ENST00000554873 HMGN5P82970 282 aaKnown RBP19.26■□□□□ 0.67
SYNE3-203ENST00000554873 ATP2B3Q16720 1220 aa19.26■□□□□ 0.67
SYNE3-203ENST00000554873 ABCC11Q96J66 1382 aa19.26■□□□□ 0.67
SYNE3-203ENST00000554873 TMEM57Q8N5G2 664 aa19.25■□□□□ 0.67
SYNE3-203ENST00000554873 STK26Q9P289 416 aa19.24■□□□□ 0.67
SYNE3-203ENST00000554873 SRPK2P78362 688 aaKnown RBP19.24■□□□□ 0.67
SYNE3-203ENST00000554873 KIAA2012Q0VF49 1180 aa19.24■□□□□ 0.67
SYNE3-203ENST00000554873 CAVIN1Q6NZI2 390 aaKnown RBP19.24■□□□□ 0.67
SYNE3-203ENST00000554873 SENP3Q9H4L4 574 aaPredicted RBP19.24■□□□□ 0.67
SYNE3-203ENST00000554873 ZBTB40Q9NUA8 1239 aa19.24■□□□□ 0.67
SYNE3-203ENST00000554873 ABCC3O15438 1527 aa19.24■□□□□ 0.67
SYNE3-203ENST00000554873 FYB1O15117 783 aa19.24■□□□□ 0.67
SYNE3-203ENST00000554873 IL16Q14005 1332 aa19.24■□□□□ 0.67
SYNE3-203ENST00000554873 ZNF830Q96NB3 372 aaPredicted RBP19.23■□□□□ 0.67
SYNE3-203ENST00000554873 COL3A1P02461 1466 aaPredicted RBP19.23■□□□□ 0.67
SYNE3-203ENST00000554873 MLH3Q9UHC1 1453 aa19.23■□□□□ 0.67
SYNE3-203ENST00000554873 PRIM1P49642 420 aaKnown RBP19.22■□□□□ 0.67
SYNE3-203ENST00000554873 POGZQ7Z3K3 1410 aa19.22■□□□□ 0.67
SYNE3-203ENST00000554873 K7ELQ4 463 aaPredicted RBP19.22■□□□□ 0.67
SYNE3-203ENST00000554873 HECW2Q9P2P5 1572 aa19.21■□□□□ 0.67
SYNE3-203ENST00000554873 NEXMIFQ5QGS0 1516 aa19.21■□□□□ 0.67
SYNE3-203ENST00000554873 FOXD4L1Q9NU39 408 aa19.21■□□□□ 0.67
SYNE3-203ENST00000554873 SIGLEC1Q9BZZ2 1709 aa19.2■□□□□ 0.66
SYNE3-203ENST00000554873 VGLL3A8MV65 326 aa19.2■□□□□ 0.66
SYNE3-203ENST00000554873 DNTTIP2Q5QJE6 756 aaKnown RBP19.2■□□□□ 0.66
SYNE3-203ENST00000554873 CAMSAP1Q5T5Y3 1602 aa19.2■□□□□ 0.66
SYNE3-203ENST00000554873 IDI1Q13907 227 aa19.2■□□□□ 0.66
SYNE3-203ENST00000554873 CDK11BP21127 795 aaKnown RBP19.19■□□□□ 0.66
SYNE3-203ENST00000554873 JARID2Q92833 1246 aaPredicted RBP19.19■□□□□ 0.66
SYNE3-203ENST00000554873 IPO8O15397 1037 aaKnown RBP19.19■□□□□ 0.66
SYNE3-203ENST00000554873 TSC1Q92574 1164 aa19.19■□□□□ 0.66
SYNE3-203ENST00000554873 DIAPH1O60610 1272 aaKnown RBP19.18■□□□□ 0.66
SYNE3-203ENST00000554873 NUCB1Q02818 461 aa19.18■□□□□ 0.66
SYNE3-203ENST00000554873 CGNQ9P2M7 1197 aaKnown RBP19.18■□□□□ 0.66
SYNE3-203ENST00000554873 TERF2IPQ9NYB0 399 aa19.18■□□□□ 0.66
SYNE3-203ENST00000554873 KIF3AQ9Y496 699 aa19.18■□□□□ 0.66
SYNE3-203ENST00000554873 MCTP1Q6DN14 999 aa19.17■□□□□ 0.66
SYNE3-203ENST00000554873 LMBRD1Q9NUN5 540 aa19.17■□□□□ 0.66
SYNE3-203ENST00000554873 MINK1Q8N4C8 1332 aaPredicted RBP19.17■□□□□ 0.66
SYNE3-203ENST00000554873 KIF16BQ96L93 1317 aa19.17■□□□□ 0.66
SYNE3-203ENST00000554873 PIK3C2BO00750 1634 aa19.17■□□□□ 0.66
SYNE3-203ENST00000554873 KIF2CQ99661 725 aa19.16■□□□□ 0.66
SYNE3-203ENST00000554873 LNPKQ9C0E8 428 aa19.16■□□□□ 0.66
SYNE3-203ENST00000554873 CD2BP2O95400 341 aaKnown RBP19.15■□□□□ 0.66
SYNE3-203ENST00000554873 GAS2L2Q8NHY3 880 aa19.15■□□□□ 0.66
SYNE3-203ENST00000554873 NPM1P06748 294 aaKnown RBP eCLIP19.15■□□□□ 0.66
SYNE3-203ENST00000554873 ALDH1L2Q3SY69 923 aa19.15■□□□□ 0.66
SYNE3-203ENST00000554873 LRSAM1Q6UWE0 723 aa19.15■□□□□ 0.66
SYNE3-203ENST00000554873 PDCL2Q8N4E4 241 aa19.15■□□□□ 0.66
SYNE3-203ENST00000554873 CD163L1Q9NR16 1453 aa19.15■□□□□ 0.66
SYNE3-203ENST00000554873 PTMAP06454 111 aaKnown RBP19.15■□□□□ 0.66
SYNE3-203ENST00000554873 PRAM1Q96QH2 718 aa19.15■□□□□ 0.66
SYNE3-203ENST00000554873 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.15■□□□□ 0.66
SYNE3-203ENST00000554873 ATAD2Q6PL18 1390 aa19.14■□□□□ 0.65
SYNE3-203ENST00000554873 PNPLA6Q8IY17 1366 aa19.14■□□□□ 0.65
SYNE3-203ENST00000554873 SPDYE4A6NLX3 237 aa19.14■□□□□ 0.65
SYNE3-203ENST00000554873 RAPGEF3O95398 923 aa19.14■□□□□ 0.65
SYNE3-203ENST00000554873 CHD1LQ86WJ1 897 aa19.14■□□□□ 0.65
SYNE3-203ENST00000554873 NUCB2P80303 420 aa19.13■□□□□ 0.65
SYNE3-203ENST00000554873 ZFYVE9O95405 1425 aa19.13■□□□□ 0.65
SYNE3-203ENST00000554873 MED14O60244 1454 aa19.13■□□□□ 0.65
SYNE3-203ENST00000554873 ZNF771Q7L3S4 317 aaPredicted RBP19.13■□□□□ 0.65
SYNE3-203ENST00000554873 PLCD3Q8N3E9 789 aa19.13■□□□□ 0.65
SYNE3-203ENST00000554873 FCHSD2O94868 740 aa19.12■□□□□ 0.65
SYNE3-203ENST00000554873 PIBF1Q8WXW3 757 aa19.12■□□□□ 0.65
SYNE3-203ENST00000554873 BCL2L12Q9HB09 334 aa19.12■□□□□ 0.65
SYNE3-203ENST00000554873 PTPRMP28827 1452 aa19.11■□□□□ 0.65
SYNE3-203ENST00000554873 ZBTB22O15209 634 aa19.1■□□□□ 0.65
SYNE3-203ENST00000554873 FBLN1P23142 703 aa19.1■□□□□ 0.65
SYNE3-203ENST00000554873 SLC52A1Q9NWF4 448 aa19.1■□□□□ 0.65
SYNE3-203ENST00000554873 ZBTB7BO15156 539 aaPredicted RBP19.1■□□□□ 0.65
SYNE3-203ENST00000554873 HDGFL2Q7Z4V5 671 aaPredicted RBP19.1■□□□□ 0.65
SYNE3-203ENST00000554873 FEZ1Q99689 392 aa19.1■□□□□ 0.65
SYNE3-203ENST00000554873 CABP1Q9NZU7 370 aa19.1■□□□□ 0.65
SYNE3-203ENST00000554873 PRKAR2BP31323 418 aa19.1■□□□□ 0.65
SYNE3-203ENST00000554873 BRPF1P55201 1214 aaPredicted RBP19.1■□□□□ 0.65
SYNE3-203ENST00000554873 NOLC1Q14978 699 aaKnown RBP eCLIP19.1■□□□□ 0.65
SYNE3-203ENST00000554873 CDK19Q9BWU1 502 aa19.1■□□□□ 0.65
SYNE3-203ENST00000554873 ANKRD26Q9UPS8 1709 aa19.09■□□□□ 0.65
SYNE3-203ENST00000554873 BMP2KLQ5H9B9 411 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms