RNA–Protein interactions for RNA: ENST00000554048.2

DUXA-201, Transcript of double homeobox A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene DUXA, Length 1,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUXA-201ENST00000554048 CDK15Q96Q40 435 aa12.32□□□□□ -0.44
DUXA-201ENST00000554048 KCTD15Q96SI1 283 aaPredicted RBP12.32□□□□□ -0.44
DUXA-201ENST00000554048 PPP1R12CQ9BZL4 782 aa12.32□□□□□ -0.44
DUXA-201ENST00000554048 PALM3A6NDB9 673 aaPredicted RBP12.31□□□□□ -0.44
DUXA-201ENST00000554048 TFIP11Q9UBB9 837 aaKnown RBP12.31□□□□□ -0.44
DUXA-201ENST00000554048 SERPINA10Q9UK55 444 aa12.31□□□□□ -0.44
DUXA-201ENST00000554048 MCCD1P59942 119 aaPredicted RBP12.3□□□□□ -0.44
DUXA-201ENST00000554048 SLFNL1Q499Z3 407 aa12.3□□□□□ -0.44
DUXA-201ENST00000554048 CFAP70Q5T0N1 1121 aa12.3□□□□□ -0.44
DUXA-201ENST00000554048 CCDC85AQ96PX6 553 aaPredicted RBP12.3□□□□□ -0.44
DUXA-201ENST00000554048 MAP4K5Q9Y4K4 846 aa12.3□□□□□ -0.44
DUXA-201ENST00000554048 ESPNB1AK53 854 aa12.29□□□□□ -0.44
DUXA-201ENST00000554048 ALDH1A1P00352 501 aa12.29□□□□□ -0.44
DUXA-201ENST00000554048 FSHRP23945 695 aa12.29□□□□□ -0.44
DUXA-201ENST00000554048 NBPF20Q3BBV1 942 aa12.29□□□□□ -0.44
DUXA-201ENST00000554048 RNF135Q8IUD6 432 aa12.29□□□□□ -0.44
DUXA-201ENST00000554048 SKIP12755 728 aa12.28□□□□□ -0.44
DUXA-201ENST00000554048 INTS6LQ5JSJ4 861 aaKnown RBP12.28□□□□□ -0.44
DUXA-201ENST00000554048 J3QL48 77 aa12.27□□□□□ -0.45
DUXA-201ENST00000554048 NR3C2P08235 984 aa12.27□□□□□ -0.45
DUXA-201ENST00000554048 RFX1P22670 979 aa12.27□□□□□ -0.45
DUXA-201ENST00000554048 DEPDC4Q8N2C3 294 aa12.27□□□□□ -0.45
DUXA-201ENST00000554048 ADH1CP00326 375 aa12.26□□□□□ -0.45
DUXA-201ENST00000554048 MPNDQ8N594 471 aa12.26□□□□□ -0.45
DUXA-201ENST00000554048 ZNF592Q92610 1267 aa12.26□□□□□ -0.45
DUXA-201ENST00000554048 CDCA7Q9BWT1 371 aaPredicted RBP12.26□□□□□ -0.45
DUXA-201ENST00000554048 CDV3Q9UKY7 258 aaKnown RBP12.26□□□□□ -0.45
DUXA-201ENST00000554048 ATP9BO43861 1147 aa12.25□□□□□ -0.45
DUXA-201ENST00000554048 LMOD1P29536 600 aaPredicted RBP12.25□□□□□ -0.45
DUXA-201ENST00000554048 PLPP7Q8NBV4 271 aa12.25□□□□□ -0.45
DUXA-201ENST00000554048 SNIP1Q8TAD8 396 aaKnown RBP12.25□□□□□ -0.45
DUXA-201ENST00000554048 CHIC2Q9UKJ5 165 aa12.25□□□□□ -0.45
DUXA-201ENST00000554048 MAFBQ9Y5Q3 323 aaPredicted RBP12.25□□□□□ -0.45
DUXA-201ENST00000554048 TRAF7Q6Q0C0 670 aa12.24□□□□□ -0.45
DUXA-201ENST00000554048 TOR4AQ9NXH8 423 aa12.24□□□□□ -0.45
DUXA-201ENST00000554048 USP17L5A8MUK1 530 aa12.23□□□□□ -0.45
DUXA-201ENST00000554048 ERVH48-1M5A8F1 160 aa12.23□□□□□ -0.45
DUXA-201ENST00000554048 CYP4X1Q8N118 509 aa12.23□□□□□ -0.45
DUXA-201ENST00000554048 TMPRSS4Q9NRS4 437 aa12.23□□□□□ -0.45
DUXA-201ENST00000554048 TTC24A2A3L6 582 aaPredicted RBP12.22□□□□□ -0.45
DUXA-201ENST00000554048 NFATC2IPQ8NCF5 419 aa12.22□□□□□ -0.45
DUXA-201ENST00000554048 PCDHB11Q9Y5F2 797 aa12.22□□□□□ -0.45
DUXA-201ENST00000554048 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.21□□□□□ -0.45
DUXA-201ENST00000554048 USP17L3A6NCW0 530 aa12.21□□□□□ -0.45
DUXA-201ENST00000554048 USP17L4A6NCW7 530 aa12.21□□□□□ -0.45
DUXA-201ENST00000554048 RGS20O76081 388 aa12.21□□□□□ -0.45
DUXA-201ENST00000554048 PRR20EP86478 221 aa12.21□□□□□ -0.45
DUXA-201ENST00000554048 PRR20CP86479 221 aa12.21□□□□□ -0.45
DUXA-201ENST00000554048 PRR20DP86480 221 aa12.21□□□□□ -0.45
DUXA-201ENST00000554048 PRR20BP86481 221 aa12.21□□□□□ -0.45
DUXA-201ENST00000554048 PRR20AP86496 221 aa12.21□□□□□ -0.45
DUXA-201ENST00000554048 NCOA4Q13772 614 aa12.21□□□□□ -0.45
DUXA-201ENST00000554048 USP17L2Q6R6M4 530 aa12.21□□□□□ -0.45
DUXA-201ENST00000554048 USP17L1Q7RTZ2 530 aa12.21□□□□□ -0.45
DUXA-201ENST00000554048 DOLKQ9UPQ8 538 aa12.21□□□□□ -0.45
DUXA-201ENST00000554048 SMPD1P17405 629 aa12.2□□□□□ -0.46
DUXA-201ENST00000554048 NNTQ13423 1086 aa12.2□□□□□ -0.46
DUXA-201ENST00000554048 CDCA8Q53HL2 280 aa12.2□□□□□ -0.46
DUXA-201ENST00000554048 RNF20Q5VTR2 975 aa12.2□□□□□ -0.46
DUXA-201ENST00000554048 SEPT12Q8IYM1 358 aa12.2□□□□□ -0.46
DUXA-201ENST00000554048 SCTRP47872 440 aa12.19□□□□□ -0.46
DUXA-201ENST00000554048 NR5A1Q13285 461 aa12.19□□□□□ -0.46
DUXA-201ENST00000554048 OXLD1Q5BKU9 147 aa12.19□□□□□ -0.46
DUXA-201ENST00000554048 PDZRN3Q9UPQ7 1066 aa12.19□□□□□ -0.46
DUXA-201ENST00000554048 WASF2Q9Y6W5 498 aa12.19□□□□□ -0.46
DUXA-201ENST00000554048 SRPK2P78362 688 aaKnown RBP12.18□□□□□ -0.46
DUXA-201ENST00000554048 PPP1R26Q5T8A7 1209 aaPredicted RBP12.18□□□□□ -0.46
DUXA-201ENST00000554048 CCDC116Q8IYX3 515 aa12.18□□□□□ -0.46
DUXA-201ENST00000554048 PLEKHM2Q8IWE5 1019 aa12.16□□□□□ -0.46
DUXA-201ENST00000554048 ZNF784Q8NCA9 323 aaPredicted RBP12.16□□□□□ -0.46
DUXA-201ENST00000554048 HPS1Q92902 700 aa12.16□□□□□ -0.46
DUXA-201ENST00000554048 MAP7D1Q3KQU3 841 aa12.15□□□□□ -0.46
DUXA-201ENST00000554048 KANK4Q5T7N3 995 aaPredicted RBP12.15□□□□□ -0.46
DUXA-201ENST00000554048 CYLDQ9NQC7 956 aa12.15□□□□□ -0.46
DUXA-201ENST00000554048 KLF16Q9BXK1 252 aaPredicted RBP12.14□□□□□ -0.47
DUXA-201ENST00000554048 ITPKCQ96DU7 683 aa12.13□□□□□ -0.47
DUXA-201ENST00000554048 MKRN1Q9UHC7 482 aaKnown RBP12.13□□□□□ -0.47
DUXA-201ENST00000554048 LILRA1O75019 489 aa12.12□□□□□ -0.47
DUXA-201ENST00000554048 DHX9Q08211 1270 aaKnown RBP12.12□□□□□ -0.47
DUXA-201ENST00000554048 EML3Q32P44 896 aa12.12□□□□□ -0.47
DUXA-201ENST00000554048 ZFAND3Q9H8U3 227 aa12.12□□□□□ -0.47
DUXA-201ENST00000554048 ADD1P35611 737 aaKnown RBP12.11□□□□□ -0.47
DUXA-201ENST00000554048 ERVK-9P63128 1117 aa12.11□□□□□ -0.47
DUXA-201ENST00000554048 PBXIP1Q96AQ6 731 aa12.11□□□□□ -0.47
DUXA-201ENST00000554048 ZIC2O95409 532 aaPredicted RBP12.1□□□□□ -0.47
DUXA-201ENST00000554048 WDR4P57081 412 aaKnown RBP12.1□□□□□ -0.47
DUXA-201ENST00000554048 CBLBQ13191 982 aa12.1□□□□□ -0.47
DUXA-201ENST00000554048 VRTNQ9H8Y1 702 aa12.1□□□□□ -0.47
DUXA-201ENST00000554048 GFRA3O60609 400 aa12.09□□□□□ -0.47
DUXA-201ENST00000554048 STAU1O95793 577 aaKnown RBP12.09□□□□□ -0.47
DUXA-201ENST00000554048 TIMP2P16035 220 aa12.09□□□□□ -0.47
DUXA-201ENST00000554048 CLDN10P78369 228 aa12.09□□□□□ -0.47
DUXA-201ENST00000554048 CRTC2Q53ET0 693 aaPredicted RBP12.09□□□□□ -0.47
DUXA-201ENST00000554048 KIAA1024Q9UPX6 916 aa12.09□□□□□ -0.47
DUXA-201ENST00000554048 EMILIN1Q9Y6C2 1016 aa12.09□□□□□ -0.47
DUXA-201ENST00000554048 FAM187AA6NFU0 413 aa12.08□□□□□ -0.48
DUXA-201ENST00000554048 USP4Q13107 963 aa12.08□□□□□ -0.48
DUXA-201ENST00000554048 CC2D2BQ6DHV5 1058 aa12.08□□□□□ -0.48
DUXA-201ENST00000554048 OSBPL3Q9H4L5 887 aa12.08□□□□□ -0.48
DUXA-201ENST00000554048 NOD1Q9Y239 953 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms