RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 TRPM3Q9HCF6 1732 aaPredicted RBP25.68■■□□□ 1.7
RBFOX1-215ENST00000553186 E9PSI1 815 aa25.68■■□□□ 1.7
RBFOX1-215ENST00000553186 WDR63Q8IWG1 891 aa25.66■■□□□ 1.7
RBFOX1-215ENST00000553186 AMPHP49418 695 aa25.66■■□□□ 1.7
RBFOX1-215ENST00000553186 IRX6P78412 446 aaPredicted RBP25.66■■□□□ 1.7
RBFOX1-215ENST00000553186 NFAT5O94916 1531 aa25.65■■□□□ 1.7
RBFOX1-215ENST00000553186 PHACTR3Q96KR7 559 aa25.64■■□□□ 1.7
RBFOX1-215ENST00000553186 TRIM35Q9UPQ4 493 aa25.64■■□□□ 1.7
RBFOX1-215ENST00000553186 HOXC9P31274 260 aa25.63■■□□□ 1.69
RBFOX1-215ENST00000553186 KCNH5Q8NCM2 988 aa25.62■■□□□ 1.69
RBFOX1-215ENST00000553186 DDX17Q92841 729 aaKnown RBP25.62■■□□□ 1.69
RBFOX1-215ENST00000553186 RGPD1P0DJD0 1748 aa25.62■■□□□ 1.69
RBFOX1-215ENST00000553186 USP19O94966 1318 aa25.61■■□□□ 1.69
RBFOX1-215ENST00000553186 NPHP3Q7Z494 1330 aa25.61■■□□□ 1.69
RBFOX1-215ENST00000553186 RIPK4P57078 832 aa25.61■■□□□ 1.69
RBFOX1-215ENST00000553186 AEBP1Q8IUX7 1158 aa25.6■■□□□ 1.69
RBFOX1-215ENST00000553186 SLIT3O75094 1523 aa25.6■■□□□ 1.69
RBFOX1-215ENST00000553186 RTL1A6NKG5 1358 aa25.6■■□□□ 1.69
RBFOX1-215ENST00000553186 NEFMP07197 916 aa25.59■■□□□ 1.69
RBFOX1-215ENST00000553186 SULT6B1Q6IMI4 303 aa25.59■■□□□ 1.69
RBFOX1-215ENST00000553186 BRINP3Q76B58 766 aa25.59■■□□□ 1.69
RBFOX1-215ENST00000553186 GCP02774 474 aa25.58■■□□□ 1.69
RBFOX1-215ENST00000553186 LMOD2Q6P5Q4 547 aa25.58■■□□□ 1.69
RBFOX1-215ENST00000553186 SLAIN2Q9P270 581 aa25.58■■□□□ 1.69
RBFOX1-215ENST00000553186 NFE2L2Q16236 605 aa25.58■■□□□ 1.68
RBFOX1-215ENST00000553186 ARHGEF10O15013 1369 aa25.58■■□□□ 1.68
RBFOX1-215ENST00000553186 ALS2Q96Q42 1657 aa25.57■■□□□ 1.68
RBFOX1-215ENST00000553186 ERICH6BQ5W0A0 696 aa25.57■■□□□ 1.68
RBFOX1-215ENST00000553186 RRP1P56182 461 aaKnown RBP25.56■■□□□ 1.68
RBFOX1-215ENST00000553186 PXDNQ92626 1479 aa25.56■■□□□ 1.68
RBFOX1-215ENST00000553186 IGSF1Q8N6C5 1336 aa25.55■■□□□ 1.68
RBFOX1-215ENST00000553186 IP6K1Q92551 441 aa25.55■■□□□ 1.68
RBFOX1-215ENST00000553186 EYA1Q99502 592 aa25.55■■□□□ 1.68
RBFOX1-215ENST00000553186 KDRP35968 1356 aa25.54■■□□□ 1.68
RBFOX1-215ENST00000553186 ARHGEF25Q86VW2 580 aa25.54■■□□□ 1.68
RBFOX1-215ENST00000553186 PELP1Q8IZL8 1130 aaKnown RBP25.54■■□□□ 1.68
RBFOX1-215ENST00000553186 LTN1O94822 1766 aa25.53■■□□□ 1.68
RBFOX1-215ENST00000553186 PHRF1Q9P1Y6 1649 aaKnown RBP25.53■■□□□ 1.68
RBFOX1-215ENST00000553186 IL16Q14005 1332 aa25.52■■□□□ 1.68
RBFOX1-215ENST00000553186 TNS3Q68CZ2 1445 aa25.51■■□□□ 1.67
RBFOX1-215ENST00000553186 SPATA31A3Q5VYP0 1347 aa25.5■■□□□ 1.67
RBFOX1-215ENST00000553186 MED1Q15648 1581 aaPredicted RBP25.5■■□□□ 1.67
RBFOX1-215ENST00000553186 MYH16Q9H6N6 1097 aa25.5■■□□□ 1.67
RBFOX1-215ENST00000553186 PLEKHG5O94827 1062 aa25.48■■□□□ 1.67
RBFOX1-215ENST00000553186 LTV1Q96GA3 475 aaPredicted RBP25.47■■□□□ 1.67
RBFOX1-215ENST00000553186 SOS2Q07890 1332 aaPredicted RBP25.47■■□□□ 1.67
RBFOX1-215ENST00000553186 FANCIQ9NVI1 1328 aa25.46■■□□□ 1.67
RBFOX1-215ENST00000553186 ZBTB7CA1YPR0 619 aa25.44■■□□□ 1.66
RBFOX1-215ENST00000553186 PLIN1O60240 522 aa25.44■■□□□ 1.66
RBFOX1-215ENST00000553186 LMOD3Q0VAK6 560 aa25.44■■□□□ 1.66
RBFOX1-215ENST00000553186 TSR2Q969E8 191 aaKnown RBP25.44■■□□□ 1.66
RBFOX1-215ENST00000553186 THUMPD2Q9BTF0 503 aaKnown RBP25.43■■□□□ 1.66
RBFOX1-215ENST00000553186 LTBP4Q8N2S1 1624 aa25.43■■□□□ 1.66
RBFOX1-215ENST00000553186 PPP4R2Q9NY27 417 aa25.42■■□□□ 1.66
RBFOX1-215ENST00000553186 AXIN2Q9Y2T1 843 aa25.41■■□□□ 1.66
RBFOX1-215ENST00000553186 ZC3H6P61129 1189 aaKnown RBP25.41■■□□□ 1.66
RBFOX1-215ENST00000553186 NBPF6Q5VWK0 638 aa25.41■■□□□ 1.66
RBFOX1-215ENST00000553186 CABLES1Q8TDN4 633 aa25.41■■□□□ 1.66
RBFOX1-215ENST00000553186 NBPF4Q96M43 638 aa25.41■■□□□ 1.66
RBFOX1-215ENST00000553186 DLG5Q8TDM6 1919 aa25.4■■□□□ 1.66
RBFOX1-215ENST00000553186 FAM83GA6ND36 823 aa25.4■■□□□ 1.66
RBFOX1-215ENST00000553186 CALD1Q05682 793 aaKnown RBP25.4■■□□□ 1.66
RBFOX1-215ENST00000553186 MTHFSDQ2M296 383 aaKnown RBP25.39■■□□□ 1.66
RBFOX1-215ENST00000553186 BCAR3O75815 825 aa25.39■■□□□ 1.65
RBFOX1-215ENST00000553186 ZNF853P0CG23 659 aa25.38■■□□□ 1.65
RBFOX1-215ENST00000553186 DCTN1Q14203 1278 aa25.37■■□□□ 1.65
RBFOX1-215ENST00000553186 USHBP1Q8N6Y0 703 aa25.37■■□□□ 1.65
RBFOX1-215ENST00000553186 CRYBG1Q9Y4K1 1723 aa25.37■■□□□ 1.65
RBFOX1-215ENST00000553186 RARSP54136 660 aaKnown RBP25.37■■□□□ 1.65
RBFOX1-215ENST00000553186 EXOSC9Q06265 439 aaKnown RBP25.37■■□□□ 1.65
RBFOX1-215ENST00000553186 IFT57Q9NWB7 429 aa25.37■■□□□ 1.65
RBFOX1-215ENST00000553186 CT47B1P0C2W7 299 aaPredicted RBP25.36■■□□□ 1.65
RBFOX1-215ENST00000553186 ANKRD24Q8TF21 1146 aa25.36■■□□□ 1.65
RBFOX1-215ENST00000553186 LRRC59Q96AG4 307 aaKnown RBP25.36■■□□□ 1.65
RBFOX1-215ENST00000553186 NCAPD2Q15021 1401 aa25.35■■□□□ 1.65
RBFOX1-215ENST00000553186 GAS2L2Q8NHY3 880 aa25.34■■□□□ 1.65
RBFOX1-215ENST00000553186 NHSL1Q5SYE7 1610 aa25.34■■□□□ 1.65
RBFOX1-215ENST00000553186 GNAI1P63096 354 aa25.34■■□□□ 1.65
RBFOX1-215ENST00000553186 C20orf194Q5TEA3 1177 aa25.34■■□□□ 1.65
RBFOX1-215ENST00000553186 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.34■■□□□ 1.65
RBFOX1-215ENST00000553186 CFAP44Q96MT7 982 aa25.34■■□□□ 1.65
RBFOX1-215ENST00000553186 CPDO75976 1380 aa25.33■■□□□ 1.65
RBFOX1-215ENST00000553186 ERBB3P21860 1342 aa25.33■■□□□ 1.65
RBFOX1-215ENST00000553186 EXOC6Q8TAG9 804 aa25.32■■□□□ 1.64
RBFOX1-215ENST00000553186 LAS1LQ9Y4W2 734 aaKnown RBP25.32■■□□□ 1.64
RBFOX1-215ENST00000553186 MCM10Q7L590 875 aa25.32■■□□□ 1.64
RBFOX1-215ENST00000553186 MBIPQ9NS73 344 aa25.31■■□□□ 1.64
RBFOX1-215ENST00000553186 KIAA0232Q92628 1395 aa25.3■■□□□ 1.64
RBFOX1-215ENST00000553186 COL18A1P39060 1754 aa25.3■■□□□ 1.64
RBFOX1-215ENST00000553186 RGPD2P0DJD1 1756 aa25.29■■□□□ 1.64
RBFOX1-215ENST00000553186 ABCC6O95255 1503 aa25.29■■□□□ 1.64
RBFOX1-215ENST00000553186 B4GALNT3Q6L9W6 998 aa25.28■■□□□ 1.64
RBFOX1-215ENST00000553186 CAMTA1Q9Y6Y1 1673 aa25.28■■□□□ 1.64
RBFOX1-215ENST00000553186 CRB1P82279 1406 aa25.28■■□□□ 1.64
RBFOX1-215ENST00000553186 HTATSF1O43719 755 aaKnown RBP25.27■■□□□ 1.64
RBFOX1-215ENST00000553186 CHRNA2Q15822 529 aa25.27■■□□□ 1.64
RBFOX1-215ENST00000553186 CRBNQ96SW2 442 aa25.27■■□□□ 1.64
RBFOX1-215ENST00000553186 RGPD5Q99666 1765 aa25.26■■□□□ 1.64
RBFOX1-215ENST00000553186 CHL1O00533 1208 aa25.25■■□□□ 1.63
RBFOX1-215ENST00000553186 RTF1Q92541 710 aaKnown RBP25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms