RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 NKTRP30414 1462 aaKnown RBP13.05□□□□□ -0.32
TMEM116-216ENST00000552800 KDM4FA0A1W2PPD8 638 aa13.05□□□□□ -0.32
TMEM116-216ENST00000552800 ACEP12821 1306 aa13.05□□□□□ -0.32
TMEM116-216ENST00000552800 ADGRL3Q9HAR2 1447 aa13.05□□□□□ -0.32
TMEM116-216ENST00000552800 TTC21BQ7Z4L5 1316 aa13.04□□□□□ -0.32
TMEM116-216ENST00000552800 C7P10643 843 aa13.03□□□□□ -0.32
TMEM116-216ENST00000552800 ASTLQ6HA08 431 aaPredicted RBP13.03□□□□□ -0.32
TMEM116-216ENST00000552800 GGNBP2Q9H3C7 697 aa13.03□□□□□ -0.32
TMEM116-216ENST00000552800 POLKQ9UBT6 870 aa13.03□□□□□ -0.32
TMEM116-216ENST00000552800 MAP2P11137 1827 aaKnown RBP13.03□□□□□ -0.32
TMEM116-216ENST00000552800 OVOS2A0A0J9YW53 1432 aa13.03□□□□□ -0.32
TMEM116-216ENST00000552800 OVOS2Q6IE36 1432 aa13.03□□□□□ -0.32
TMEM116-216ENST00000552800 NALCNQ8IZF0 1738 aa13.02□□□□□ -0.32
TMEM116-216ENST00000552800 CNGB1Q14028 1251 aaPredicted RBP13.02□□□□□ -0.33
TMEM116-216ENST00000552800 SLC39A7Q92504 469 aa13.02□□□□□ -0.33
TMEM116-216ENST00000552800 RUNDC1Q96C34 613 aa13.02□□□□□ -0.33
TMEM116-216ENST00000552800 MST1RQ04912 1400 aa13.02□□□□□ -0.33
TMEM116-216ENST00000552800 PNNQ9H307 717 aaKnown RBP13.01□□□□□ -0.33
TMEM116-216ENST00000552800 NCKAP5LQ9HCH0 1330 aa13.01□□□□□ -0.33
TMEM116-216ENST00000552800 KIF24Q5T7B8 1368 aa13.01□□□□□ -0.33
TMEM116-216ENST00000552800 DCCP43146 1447 aa13.01□□□□□ -0.33
TMEM116-216ENST00000552800 RGPD8O14715 1765 aaPredicted RBP13□□□□□ -0.33
TMEM116-216ENST00000552800 CDK12Q9NYV4 1490 aaPredicted RBP13□□□□□ -0.33
TMEM116-216ENST00000552800 FAM163AQ96GL9 167 aaPredicted RBP13□□□□□ -0.33
TMEM116-216ENST00000552800 PLEKHF1Q96S99 279 aa13□□□□□ -0.33
TMEM116-216ENST00000552800 ECM2O94769 699 aaPredicted RBP12.99□□□□□ -0.33
TMEM116-216ENST00000552800 FCHSD2O94868 740 aa12.99□□□□□ -0.33
TMEM116-216ENST00000552800 COG3Q96JB2 828 aa12.99□□□□□ -0.33
TMEM116-216ENST00000552800 C19orf44Q9H6X5 657 aa12.99□□□□□ -0.33
TMEM116-216ENST00000552800 IQSEC2Q5JU85 1478 aa12.98□□□□□ -0.33
TMEM116-216ENST00000552800 SLFN5Q08AF3 891 aa12.98□□□□□ -0.33
TMEM116-216ENST00000552800 WDR63Q8IWG1 891 aa12.98□□□□□ -0.33
TMEM116-216ENST00000552800 SUPT16HQ9Y5B9 1047 aaKnown RBP12.98□□□□□ -0.33
TMEM116-216ENST00000552800 LMTK3Q96Q04 1460 aa12.97□□□□□ -0.33
TMEM116-216ENST00000552800 ATMINO43313 823 aaPredicted RBP12.97□□□□□ -0.33
TMEM116-216ENST00000552800 DIAPH1O60610 1272 aaKnown RBP12.97□□□□□ -0.33
TMEM116-216ENST00000552800 DUSP27Q5VZP5 1158 aa12.97□□□□□ -0.33
TMEM116-216ENST00000552800 NME9Q86XW9 330 aa12.97□□□□□ -0.33
TMEM116-216ENST00000552800 APAF1O14727 1248 aa12.96□□□□□ -0.33
TMEM116-216ENST00000552800 IL13P35225 146 aa12.96□□□□□ -0.33
TMEM116-216ENST00000552800 GOLGA2Q08379 1002 aa12.96□□□□□ -0.33
TMEM116-216ENST00000552800 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.96□□□□□ -0.33
TMEM116-216ENST00000552800 STRCQ7RTU9 1775 aa12.95□□□□□ -0.34
TMEM116-216ENST00000552800 E9PSI1 815 aa12.94□□□□□ -0.34
TMEM116-216ENST00000552800 WWC1Q8IX03 1113 aa12.94□□□□□ -0.34
TMEM116-216ENST00000552800 PHF8Q9UPP1 1060 aa12.94□□□□□ -0.34
TMEM116-216ENST00000552800 IL16Q14005 1332 aa12.93□□□□□ -0.34
TMEM116-216ENST00000552800 PYGBP11216 843 aa12.93□□□□□ -0.34
TMEM116-216ENST00000552800 TCP11L2Q8N4U5 519 aa12.93□□□□□ -0.34
TMEM116-216ENST00000552800 SCUBE2Q9NQ36 999 aa12.93□□□□□ -0.34
TMEM116-216ENST00000552800 STRCP1A6NGW2 1772 aa12.92□□□□□ -0.34
TMEM116-216ENST00000552800 TNNT2P45379 298 aaPredicted RBP12.92□□□□□ -0.34
TMEM116-216ENST00000552800 NGDNQ8NEJ9 315 aaKnown RBP12.92□□□□□ -0.34
TMEM116-216ENST00000552800 CDCA7LQ96GN5 454 aa12.92□□□□□ -0.34
TMEM116-216ENST00000552800 MARF1Q9Y4F3 1742 aaKnown RBP12.92□□□□□ -0.34
TMEM116-216ENST00000552800 PIK3C2AO00443 1686 aa12.92□□□□□ -0.34
TMEM116-216ENST00000552800 NEFLP07196 543 aa12.91□□□□□ -0.34
TMEM116-216ENST00000552800 PROSER2Q86WR7 435 aaPredicted RBP12.91□□□□□ -0.34
TMEM116-216ENST00000552800 RSPH6AQ9H0K4 717 aa12.91□□□□□ -0.34
TMEM116-216ENST00000552800 PHRF1Q9P1Y6 1649 aaKnown RBP12.91□□□□□ -0.34
TMEM116-216ENST00000552800 KIF1AQ12756 1690 aa12.9□□□□□ -0.34
TMEM116-216ENST00000552800 U2AF1L5P0DN76 240 aaPredicted RBP12.9□□□□□ -0.34
TMEM116-216ENST00000552800 TMPOP42166 694 aaKnown RBP12.9□□□□□ -0.34
TMEM116-216ENST00000552800 U2AF1Q01081 240 aaKnown RBP eCLIP12.9□□□□□ -0.341e-6■■□□□ 12.9
TMEM116-216ENST00000552800 PMFBP1Q8TBY8 1022 aa12.9□□□□□ -0.34
TMEM116-216ENST00000552800 MS4A3Q96HJ5 214 aa12.9□□□□□ -0.34
TMEM116-216ENST00000552800 RCAN3Q9UKA8 241 aa12.9□□□□□ -0.34
TMEM116-216ENST00000552800 RGPD1P0DJD0 1748 aa12.9□□□□□ -0.34
TMEM116-216ENST00000552800 C1orf167Q5SNV9 1468 aa12.9□□□□□ -0.34
TMEM116-216ENST00000552800 CT47B1P0C2W7 299 aaPredicted RBP12.89□□□□□ -0.35
TMEM116-216ENST00000552800 EMILIN1Q9Y6C2 1016 aa12.89□□□□□ -0.35
TMEM116-216ENST00000552800 SBNO1A3KN83 1393 aa12.89□□□□□ -0.35
TMEM116-216ENST00000552800 CADPS2Q86UW7 1296 aa12.88□□□□□ -0.35
TMEM116-216ENST00000552800 KDRP35968 1356 aa12.87□□□□□ -0.35
TMEM116-216ENST00000552800 TMEM94Q12767 1356 aa12.87□□□□□ -0.35
TMEM116-216ENST00000552800 CCDC146Q8IYE0 955 aa12.87□□□□□ -0.35
TMEM116-216ENST00000552800 TRIM35Q9UPQ4 493 aa12.87□□□□□ -0.35
TMEM116-216ENST00000552800 XIRP1Q702N8 1843 aaKnown RBP12.86□□□□□ -0.35
TMEM116-216ENST00000552800 RTL1A6NKG5 1358 aa12.86□□□□□ -0.35
TMEM116-216ENST00000552800 FLT4P35916 1363 aa12.86□□□□□ -0.35
TMEM116-216ENST00000552800 PEAK1Q9H792 1746 aa12.86□□□□□ -0.35
TMEM116-216ENST00000552800 TRPM3Q9HCF6 1732 aaPredicted RBP12.86□□□□□ -0.35
TMEM116-216ENST00000552800 NUTM2FA1L443 756 aa12.86□□□□□ -0.35
TMEM116-216ENST00000552800 RGL2O15211 777 aa12.86□□□□□ -0.35
TMEM116-216ENST00000552800 FBLN1P23142 703 aa12.86□□□□□ -0.35
TMEM116-216ENST00000552800 KCNH5Q8NCM2 988 aa12.86□□□□□ -0.35
TMEM116-216ENST00000552800 MAP3K19Q56UN5 1328 aa12.86□□□□□ -0.35
TMEM116-216ENST00000552800 SLIT3O75094 1523 aa12.85□□□□□ -0.35
TMEM116-216ENST00000552800 CHRM1P11229 460 aaPredicted RBP12.85□□□□□ -0.35
TMEM116-216ENST00000552800 PPP4R2Q9NY27 417 aa12.85□□□□□ -0.35
TMEM116-216ENST00000552800 USP19O94966 1318 aa12.85□□□□□ -0.35
TMEM116-216ENST00000552800 RRP1P56182 461 aaKnown RBP12.84□□□□□ -0.35
TMEM116-216ENST00000552800 NLRP6P59044 892 aa12.84□□□□□ -0.35
TMEM116-216ENST00000552800 PSME1Q06323 249 aa12.84□□□□□ -0.35
TMEM116-216ENST00000552800 EIF4A2Q14240 407 aaKnown RBP12.84□□□□□ -0.35
TMEM116-216ENST00000552800 ESCO1Q5FWF5 840 aa12.84□□□□□ -0.35
TMEM116-216ENST00000552800 ABTB2Q8N961 1025 aa12.84□□□□□ -0.35
TMEM116-216ENST00000552800 NFAT5O94916 1531 aa12.83□□□□□ -0.35
TMEM116-216ENST00000552800 ARHGEF10O15013 1369 aa12.83□□□□□ -0.36
TMEM116-216ENST00000552800 RRS1Q15050 365 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms