RNA–Protein interactions for RNA: ENST00000552127.5

BRF1-220, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-220ENST00000552127 TXNRD1Q16881 649 aa22.29■■□□□ 1.16
BRF1-220ENST00000552127 MAP3K5Q99683 1374 aa22.28■■□□□ 1.16
BRF1-220ENST00000552127 NUDT16Q96DE0 195 aaKnown RBP22.28■■□□□ 1.16
BRF1-220ENST00000552127 TRPM1Q7Z4N2 1603 aa22.28■■□□□ 1.16
BRF1-220ENST00000552127 SHANK3Q9BYB0 1731 aa22.27■■□□□ 1.16
BRF1-220ENST00000552127 ABTB2Q8N961 1025 aa22.26■■□□□ 1.15
BRF1-220ENST00000552127 USP19O94966 1318 aa22.26■■□□□ 1.15
BRF1-220ENST00000552127 AKAP12Q02952 1782 aa22.25■■□□□ 1.15
BRF1-220ENST00000552127 MARCH10Q8NA82 808 aaPredicted RBP22.25■■□□□ 1.15
BRF1-220ENST00000552127 POLR3AO14802 1390 aaPredicted RBP22.25■■□□□ 1.15
BRF1-220ENST00000552127 TOPAZ1Q8N9V7 1692 aa22.23■■□□□ 1.15
BRF1-220ENST00000552127 QRICH2Q9H0J4 1663 aa22.23■■□□□ 1.15
BRF1-220ENST00000552127 BCL9O00512 1426 aa22.23■■□□□ 1.15
BRF1-220ENST00000552127 WNK3Q9BYP7 1800 aa22.23■■□□□ 1.15
BRF1-220ENST00000552127 GCP02774 474 aa22.23■■□□□ 1.15
BRF1-220ENST00000552127 ACEP12821 1306 aa22.23■■□□□ 1.15
BRF1-220ENST00000552127 SIN3AQ96ST3 1273 aa22.21■■□□□ 1.15
BRF1-220ENST00000552127 AATKQ6ZMQ8 1374 aa22.2■■□□□ 1.14
BRF1-220ENST00000552127 TRIM26Q12899 539 aaPredicted RBP22.19■■□□□ 1.14
BRF1-220ENST00000552127 TOM1L2Q6ZVM7 507 aa22.19■■□□□ 1.14
BRF1-220ENST00000552127 PELP1Q8IZL8 1130 aaKnown RBP22.19■■□□□ 1.14
BRF1-220ENST00000552127 L3MBTL2Q969R5 705 aa22.19■■□□□ 1.14
BRF1-220ENST00000552127 ZBTB7CA1YPR0 619 aa22.18■■□□□ 1.14
BRF1-220ENST00000552127 NLRP13Q86W25 1043 aa22.18■■□□□ 1.14
BRF1-220ENST00000552127 NBPF1Q3BBV0 1214 aa22.17■■□□□ 1.14
BRF1-220ENST00000552127 KLHL34Q8N239 644 aa22.16■■□□□ 1.14
BRF1-220ENST00000552127 CDK19Q9BWU1 502 aa22.16■■□□□ 1.14
BRF1-220ENST00000552127 PAPPAQ13219 1627 aa22.16■■□□□ 1.14
BRF1-220ENST00000552127 NEUROD1Q13562 356 aa22.15■■□□□ 1.14
BRF1-220ENST00000552127 PLEKHG3A1L390 1219 aa22.14■■□□□ 1.13
BRF1-220ENST00000552127 CCDC61Q9Y6R9 512 aa22.14■■□□□ 1.13
BRF1-220ENST00000552127 CDCA7Q9BWT1 371 aaPredicted RBP22.13■■□□□ 1.13
BRF1-220ENST00000552127 COL18A1P39060 1754 aa22.12■■□□□ 1.13
BRF1-220ENST00000552127 WDR17Q8IZU2 1322 aa22.1■■□□□ 1.13
BRF1-220ENST00000552127 HSPA6P17066 643 aa22.1■■□□□ 1.13
BRF1-220ENST00000552127 ZNF827Q17R98 1081 aa22.1■■□□□ 1.13
BRF1-220ENST00000552127 NHSQ6T4R5 1651 aa22.1■■□□□ 1.13
BRF1-220ENST00000552127 CENPJQ9HC77 1338 aaPredicted RBP22.09■■□□□ 1.13
BRF1-220ENST00000552127 NLGN2Q8NFZ4 835 aa22.09■■□□□ 1.13
BRF1-220ENST00000552127 AXIN2Q9Y2T1 843 aa22.09■■□□□ 1.13
BRF1-220ENST00000552127 COL24A1Q17RW2 1714 aa22.08■■□□□ 1.12
BRF1-220ENST00000552127 ATP10DQ9P241 1426 aa22.07■■□□□ 1.12
BRF1-220ENST00000552127 EXOC5O00471 708 aa22.07■■□□□ 1.12
BRF1-220ENST00000552127 SLIT3O75094 1523 aa22.06■■□□□ 1.12
BRF1-220ENST00000552127 YBX3P16989 372 aaKnown RBP eCLIP22.06■■□□□ 1.12
BRF1-220ENST00000552127 POLD1P28340 1107 aa22.06■■□□□ 1.12
BRF1-220ENST00000552127 ROCK2O75116 1388 aaKnown RBP22.06■■□□□ 1.12
BRF1-220ENST00000552127 RGPD5Q99666 1765 aa22.05■■□□□ 1.12
BRF1-220ENST00000552127 ACSBG1Q96GR2 724 aa22.05■■□□□ 1.12
BRF1-220ENST00000552127 GRIN3BO60391 1043 aa22.04■■□□□ 1.12
BRF1-220ENST00000552127 NLRP6P59044 892 aa22.04■■□□□ 1.12
BRF1-220ENST00000552127 SLC16A10Q8TF71 515 aa22.04■■□□□ 1.12
BRF1-220ENST00000552127 QSER1Q2KHR3 1735 aa22.03■■□□□ 1.12
BRF1-220ENST00000552127 TONSLQ96HA7 1378 aa22.03■■□□□ 1.12
BRF1-220ENST00000552127 CARD10Q9BWT7 1032 aa22.03■■□□□ 1.12
BRF1-220ENST00000552127 GPBP1L1Q9HC44 474 aaPredicted RBP22.03■■□□□ 1.12
BRF1-220ENST00000552127 BTAF1O14981 1849 aa22.03■■□□□ 1.12
BRF1-220ENST00000552127 LRRC4BQ9NT99 713 aa22.02■■□□□ 1.12
BRF1-220ENST00000552127 PPIP5K1Q6PFW1 1433 aa22.02■■□□□ 1.12
BRF1-220ENST00000552127 TNS2Q63HR2 1409 aa22.01■■□□□ 1.11
BRF1-220ENST00000552127 CSB-PGBD3P0DP91 1061 aa22■■□□□ 1.11
BRF1-220ENST00000552127 AKT1S1Q96B36 256 aa22■■□□□ 1.11
BRF1-220ENST00000552127 BRD4O60885 1362 aaPredicted RBP21.99■■□□□ 1.11
BRF1-220ENST00000552127 CPSF1Q10570 1443 aaKnown RBP21.99■■□□□ 1.11
BRF1-220ENST00000552127 USP6P35125 1406 aa21.98■■□□□ 1.11
BRF1-220ENST00000552127 SRPK2P78362 688 aaKnown RBP21.98■■□□□ 1.11
BRF1-220ENST00000552127 PNPLA7Q6ZV29 1317 aa21.98■■□□□ 1.11
BRF1-220ENST00000552127 TUBGCP6Q96RT7 1819 aa21.97■■□□□ 1.11
BRF1-220ENST00000552127 PIK3C2AO00443 1686 aa21.97■■□□□ 1.11
BRF1-220ENST00000552127 KAT6BQ8WYB5 2073 aa21.97■■□□□ 1.11
BRF1-220ENST00000552127 ARHGEF25Q86VW2 580 aa21.96■■□□□ 1.11
BRF1-220ENST00000552127 ZNF526Q8TF50 670 aaPredicted RBP21.96■■□□□ 1.11
BRF1-220ENST00000552127 CCDC7Q96M83 1385 aa21.96■■□□□ 1.11
BRF1-220ENST00000552127 ABCC6O95255 1503 aa21.96■■□□□ 1.11
BRF1-220ENST00000552127 CABP2Q9NPB3 220 aa21.95■■□□□ 1.1
BRF1-220ENST00000552127 ADCY9O60503 1353 aa21.94■■□□□ 1.1
BRF1-220ENST00000552127 EVC2Q86UK5 1308 aa21.93■■□□□ 1.1
BRF1-220ENST00000552127 TFCP2L1Q9NZI6 479 aa21.92■■□□□ 1.1
BRF1-220ENST00000552127 SBNO2Q9Y2G9 1366 aa21.91■■□□□ 1.1
BRF1-220ENST00000552127 MON2Q7Z3U7 1717 aa21.9■■□□□ 1.1
BRF1-220ENST00000552127 SOX12O15370 315 aa21.9■■□□□ 1.1
BRF1-220ENST00000552127 SLC27A3Q5K4L6 730 aa21.9■■□□□ 1.1
BRF1-220ENST00000552127 CABP1Q9NZU7 370 aa21.9■■□□□ 1.1
BRF1-220ENST00000552127 CARD11Q9BXL7 1154 aa21.89■■□□□ 1.09
BRF1-220ENST00000552127 KCNH5Q8NCM2 988 aa21.88■■□□□ 1.09
BRF1-220ENST00000552127 KCNQ4P56696 695 aa21.87■■□□□ 1.09
BRF1-220ENST00000552127 APLP1P51693 650 aa21.85■■□□□ 1.09
BRF1-220ENST00000552127 KIF3CO14782 793 aa21.84■■□□□ 1.09
BRF1-220ENST00000552127 IL2RBP14784 551 aa21.84■■□□□ 1.09
BRF1-220ENST00000552127 DNAJC5GQ8N7S2 189 aa21.84■■□□□ 1.09
BRF1-220ENST00000552127 NFAT5O94916 1531 aa21.84■■□□□ 1.09
BRF1-220ENST00000552127 CAPN15O75808 1086 aa21.82■■□□□ 1.08
BRF1-220ENST00000552127 MSH5O43196 834 aa21.81■■□□□ 1.08
BRF1-220ENST00000552127 NLRP2Q9NX02 1062 aa21.81■■□□□ 1.08
BRF1-220ENST00000552127 COL13A1Q5TAT6 717 aaPredicted RBP21.8■■□□□ 1.08
BRF1-220ENST00000552127 LY75O60449 1722 aa21.8■■□□□ 1.08
BRF1-220ENST00000552127 TTC21BQ7Z4L5 1316 aa21.8■■□□□ 1.08
BRF1-220ENST00000552127 USP54Q70EL1 1684 aa21.79■■□□□ 1.08
BRF1-220ENST00000552127 MSL1Q68DK7 614 aa21.79■■□□□ 1.08
BRF1-220ENST00000552127 COL23A1Q86Y22 540 aaPredicted RBP21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms