RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 ZMYM4Q5VZL5 1548 aa4.04□□□□□ -1.76
CPSF6-207ENST00000551516 PLCH2O75038 1416 aa4.04□□□□□ -1.76
CPSF6-207ENST00000551516 AKNAQ7Z591 1439 aa4.04□□□□□ -1.76
CPSF6-207ENST00000551516 BCAMP50895 628 aa4.03□□□□□ -1.76
CPSF6-207ENST00000551516 HSPA2P54652 639 aa4.03□□□□□ -1.76
CPSF6-207ENST00000551516 NR6A1Q15406 480 aa4.03□□□□□ -1.76
CPSF6-207ENST00000551516 SCUBE3Q8IX30 993 aa4.03□□□□□ -1.76
CPSF6-207ENST00000551516 GLMNQ92990 594 aa4.03□□□□□ -1.76
CPSF6-207ENST00000551516 USB1Q9BQ65 265 aaKnown RBP4.03□□□□□ -1.76
CPSF6-207ENST00000551516 TRIM34Q9BYJ4 488 aa4.03□□□□□ -1.76
CPSF6-207ENST00000551516 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.03□□□□□ -1.766e-7■■□□□ 12.9
CPSF6-207ENST00000551516 ARHGEF12Q9NZN5 1544 aa4.03□□□□□ -1.76
CPSF6-207ENST00000551516 BCORL1Q5H9F3 1711 aa4.03□□□□□ -1.76
CPSF6-207ENST00000551516 KIF21BO75037 1637 aa4.03□□□□□ -1.77
CPSF6-207ENST00000551516 LTBP4Q8N2S1 1624 aa4.03□□□□□ -1.77
CPSF6-207ENST00000551516 ACIN1Q9UKV3 1341 aaKnown RBP4.02□□□□□ -1.77
CPSF6-207ENST00000551516 POM121CA8CG34 1229 aa4.02□□□□□ -1.77
CPSF6-207ENST00000551516 PDIA4P13667 645 aaKnown RBP4.02□□□□□ -1.77
CPSF6-207ENST00000551516 APLP1P51693 650 aa4.02□□□□□ -1.77
CPSF6-207ENST00000551516 VAC14Q08AM6 782 aa4.02□□□□□ -1.77
CPSF6-207ENST00000551516 IRF5Q13568 498 aa4.02□□□□□ -1.77
CPSF6-207ENST00000551516 LCE2DQ5TA82 110 aaPredicted RBP4.02□□□□□ -1.77
CPSF6-207ENST00000551516 HDGFL1Q5TGJ6 251 aa4.02□□□□□ -1.77
CPSF6-207ENST00000551516 BRICD5Q6PL45 260 aa4.02□□□□□ -1.77
CPSF6-207ENST00000551516 BLOC1S3Q6QNY0 202 aa4.02□□□□□ -1.77
CPSF6-207ENST00000551516 POTEGQ6S5H5 508 aa4.02□□□□□ -1.77
CPSF6-207ENST00000551516 LYPD8Q6UX82 237 aa4.02□□□□□ -1.77
CPSF6-207ENST00000551516 RNF19BQ6ZMZ0 732 aa4.02□□□□□ -1.77
CPSF6-207ENST00000551516 DENND4BO75064 1496 aaPredicted RBP4.02□□□□□ -1.77
CPSF6-207ENST00000551516 MAGI2Q86UL8 1455 aa4.02□□□□□ -1.77
CPSF6-207ENST00000551516 ARHGEF40Q8TER5 1519 aa4.01□□□□□ -1.77
CPSF6-207ENST00000551516 PER1O15534 1290 aaPredicted RBP4.01□□□□□ -1.77
CPSF6-207ENST00000551516 SOX11P35716 441 aa4.01□□□□□ -1.77
CPSF6-207ENST00000551516 SEMA3FQ13275 785 aa4.01□□□□□ -1.77
CPSF6-207ENST00000551516 EPS8L1Q8TE68 723 aa4.01□□□□□ -1.77
CPSF6-207ENST00000551516 MADDQ8WXG6 1647 aa4.01□□□□□ -1.77
CPSF6-207ENST00000551516 POGZQ7Z3K3 1410 aa4.01□□□□□ -1.77
CPSF6-207ENST00000551516 RICTORQ6R327 1708 aa4.01□□□□□ -1.77
CPSF6-207ENST00000551516 FANCAO15360 1455 aa4□□□□□ -1.77
CPSF6-207ENST00000551516 PPP1R15AO75807 674 aaPredicted RBP4□□□□□ -1.77
CPSF6-207ENST00000551516 JUNDP17535 347 aa4□□□□□ -1.77
CPSF6-207ENST00000551516 CTHP32929 405 aa4□□□□□ -1.77
CPSF6-207ENST00000551516 CEBPAP49715 358 aaPredicted RBP4□□□□□ -1.77
CPSF6-207ENST00000551516 EIF4G2P78344 907 aaKnown RBP eCLIP4□□□□□ -1.77
CPSF6-207ENST00000551516 NYAP1Q6ZVC0 841 aa4□□□□□ -1.77
CPSF6-207ENST00000551516 AFAP1Q8N556 730 aa4□□□□□ -1.77
CPSF6-207ENST00000551516 THAP11Q96EK4 314 aa4□□□□□ -1.77
CPSF6-207ENST00000551516 SPSB2Q99619 263 aa4□□□□□ -1.77
CPSF6-207ENST00000551516 WBP1LQ9NX94 342 aa4□□□□□ -1.77
CPSF6-207ENST00000551516 ATP10AO60312 1499 aa3.99□□□□□ -1.77
CPSF6-207ENST00000551516 KDM5CP41229 1560 aa3.99□□□□□ -1.77
CPSF6-207ENST00000551516 TTC37Q6PGP7 1564 aa3.99□□□□□ -1.77
CPSF6-207ENST00000551516 PTPRTO14522 1441 aa3.99□□□□□ -1.77
CPSF6-207ENST00000551516 SCAPERQ9BY12 1400 aa3.99□□□□□ -1.77
CPSF6-207ENST00000551516 PDE4CQ08493 712 aa3.99□□□□□ -1.77
CPSF6-207ENST00000551516 PTPRNQ16849 979 aa3.99□□□□□ -1.77
CPSF6-207ENST00000551516 MSS51Q4VC12 460 aa3.99□□□□□ -1.77
CPSF6-207ENST00000551516 THSD4Q6ZMP0 1018 aa3.99□□□□□ -1.77
CPSF6-207ENST00000551516 ARMC2Q8NEN0 867 aa3.99□□□□□ -1.77
CPSF6-207ENST00000551516 KCTD12Q96CX2 325 aaKnown RBP3.99□□□□□ -1.77
CPSF6-207ENST00000551516 AGLP35573 1532 aa3.99□□□□□ -1.77
CPSF6-207ENST00000551516 STRCQ7RTU9 1775 aa3.99□□□□□ -1.77
CPSF6-207ENST00000551516 HECW1Q76N89 1606 aa3.99□□□□□ -1.77
CPSF6-207ENST00000551516 RAPGEF6Q8TEU7 1601 aa3.99□□□□□ -1.77
CPSF6-207ENST00000551516 ARHGAP35Q9NRY4 1499 aa3.98□□□□□ -1.77
CPSF6-207ENST00000551516 MLH3Q9UHC1 1453 aa3.98□□□□□ -1.77
CPSF6-207ENST00000551516 ZC3H4Q9UPT8 1303 aaKnown RBP3.98□□□□□ -1.77
CPSF6-207ENST00000551516 TRAPPC8Q9Y2L5 1435 aa3.98□□□□□ -1.77
CPSF6-207ENST00000551516 RFX1P22670 979 aa3.98□□□□□ -1.77
CPSF6-207ENST00000551516 COPS2P61201 443 aa3.98□□□□□ -1.77
CPSF6-207ENST00000551516 NR1H3Q13133 447 aa3.98□□□□□ -1.77
CPSF6-207ENST00000551516 NUDT12Q9BQG2 462 aa3.98□□□□□ -1.77
CPSF6-207ENST00000551516 ALG2Q9H553 416 aa3.98□□□□□ -1.77
CPSF6-207ENST00000551516 FKBPLQ9UIM3 349 aa3.98□□□□□ -1.77
CPSF6-207ENST00000551516 ALKQ9UM73 1620 aa3.98□□□□□ -1.77
CPSF6-207ENST00000551516 REREQ9P2R6 1566 aa3.97□□□□□ -1.77
CPSF6-207ENST00000551516 NCOA1Q15788 1441 aa3.97□□□□□ -1.77
CPSF6-207ENST00000551516 PLEKHD1A6NEE1 506 aa3.97□□□□□ -1.77
CPSF6-207ENST00000551516 ZBBXA8MT70 800 aa3.97□□□□□ -1.77
CPSF6-207ENST00000551516 GPR37L1O60883 481 aa3.97□□□□□ -1.77
CPSF6-207ENST00000551516 ZPR1O75312 459 aa3.97□□□□□ -1.77
CPSF6-207ENST00000551516 F12P00748 615 aaPredicted RBP3.97□□□□□ -1.77
CPSF6-207ENST00000551516 CCNYL3P0C7X3 344 aa3.97□□□□□ -1.77
CPSF6-207ENST00000551516 PTPN5P54829 565 aa3.97□□□□□ -1.77
CPSF6-207ENST00000551516 PTK2Q05397 1052 aa3.97□□□□□ -1.77
CPSF6-207ENST00000551516 KCNH2Q12809 1159 aa3.97□□□□□ -1.77
CPSF6-207ENST00000551516 ADAMTS19Q8TE59 1207 aa3.97□□□□□ -1.77
CPSF6-207ENST00000551516 ZNF592Q92610 1267 aa3.97□□□□□ -1.77
CPSF6-207ENST00000551516 GPKOWQ92917 476 aaPredicted RBP eCLIP3.97□□□□□ -1.774e-7■■□□□ 14.1
CPSF6-207ENST00000551516 KRTAP3-3Q9BYR6 98 aa3.97□□□□□ -1.77
CPSF6-207ENST00000551516 KRTAP3-2Q9BYR7 98 aa3.97□□□□□ -1.77
CPSF6-207ENST00000551516 PPP1R12CQ9BZL4 782 aa3.97□□□□□ -1.77
CPSF6-207ENST00000551516 EVA1BQ9NVM1 165 aa3.97□□□□□ -1.77
CPSF6-207ENST00000551516 C9orf84Q5VXU9 1444 aa3.96□□□□□ -1.77
CPSF6-207ENST00000551516 CDK13Q14004 1512 aaKnown RBP3.96□□□□□ -1.78
CPSF6-207ENST00000551516 ZFYVE16Q7Z3T8 1539 aa3.96□□□□□ -1.78
CPSF6-207ENST00000551516 ZBTB7CA1YPR0 619 aa3.96□□□□□ -1.78
CPSF6-207ENST00000551516 PALM3A6NDB9 673 aaPredicted RBP3.96□□□□□ -1.78
CPSF6-207ENST00000551516 DXOO77932 396 aaKnown RBP3.96□□□□□ -1.78
CPSF6-207ENST00000551516 ADH1BP00325 375 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms