RNA–Protein interactions for RNA: ENST00000550077.1

AC055716.1-201, humanhuman

BASIC

Gene AC055716.1, Length 495 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.1-201ENST00000550077 PLEKHG3A1L390 1219 aa12.82□□□□□ -0.36
AC055716.1-201ENST00000550077 AXIN2Q9Y2T1 843 aa12.82□□□□□ -0.36
AC055716.1-201ENST00000550077 DDB1Q16531 1140 aa12.81□□□□□ -0.36
AC055716.1-201ENST00000550077 TXNRD1Q16881 649 aa12.81□□□□□ -0.36
AC055716.1-201ENST00000550077 SLC15A2Q16348 729 aa12.8□□□□□ -0.36
AC055716.1-201ENST00000550077 CCDC61Q9Y6R9 512 aa12.8□□□□□ -0.36
AC055716.1-201ENST00000550077 IFFO2Q5TF58 517 aa12.79□□□□□ -0.36
AC055716.1-201ENST00000550077 SLIT3O75094 1523 aa12.78□□□□□ -0.36
AC055716.1-201ENST00000550077 PIK3C2AO00443 1686 aa12.78□□□□□ -0.36
AC055716.1-201ENST00000550077 TOM1L2Q6ZVM7 507 aa12.78□□□□□ -0.36
AC055716.1-201ENST00000550077 NLRP13Q86W25 1043 aa12.78□□□□□ -0.36
AC055716.1-201ENST00000550077 CABP2Q9NPB3 220 aa12.77□□□□□ -0.37
AC055716.1-201ENST00000550077 STK32BQ9NY57 414 aa12.77□□□□□ -0.37
AC055716.1-201ENST00000550077 AATKQ6ZMQ8 1374 aa12.77□□□□□ -0.37
AC055716.1-201ENST00000550077 PPIP5K1Q6PFW1 1433 aa12.77□□□□□ -0.37
AC055716.1-201ENST00000550077 PAPPAQ13219 1627 aa12.77□□□□□ -0.37
AC055716.1-201ENST00000550077 NBPF1Q3BBV0 1214 aa12.76□□□□□ -0.37
AC055716.1-201ENST00000550077 SHANK3Q9BYB0 1731 aa12.76□□□□□ -0.37
AC055716.1-201ENST00000550077 NLRP6P59044 892 aa12.75□□□□□ -0.37
AC055716.1-201ENST00000550077 MTFR1LQ9H019 292 aa12.75□□□□□ -0.37
AC055716.1-201ENST00000550077 NHSQ6T4R5 1651 aa12.74□□□□□ -0.37
AC055716.1-201ENST00000550077 BCL9O00512 1426 aa12.74□□□□□ -0.37
AC055716.1-201ENST00000550077 RAB3GAP2Q9H2M9 1393 aa12.74□□□□□ -0.37
AC055716.1-201ENST00000550077 WDR17Q8IZU2 1322 aa12.74□□□□□ -0.37
AC055716.1-201ENST00000550077 ZNF827Q17R98 1081 aa12.74□□□□□ -0.37
AC055716.1-201ENST00000550077 ACSBG1Q96GR2 724 aa12.74□□□□□ -0.37
AC055716.1-201ENST00000550077 ARXQ96QS3 562 aa12.74□□□□□ -0.37
AC055716.1-201ENST00000550077 BTAF1O14981 1849 aa12.74□□□□□ -0.37
AC055716.1-201ENST00000550077 TUBGCP6Q96RT7 1819 aa12.74□□□□□ -0.37
AC055716.1-201ENST00000550077 C11orf95C9JLR9 678 aaPredicted RBP12.73□□□□□ -0.37
AC055716.1-201ENST00000550077 CABP1Q9NZU7 370 aa12.73□□□□□ -0.37
AC055716.1-201ENST00000550077 USP6P35125 1406 aa12.72□□□□□ -0.37
AC055716.1-201ENST00000550077 COL24A1Q17RW2 1714 aa12.72□□□□□ -0.37
AC055716.1-201ENST00000550077 SOX12O15370 315 aa12.72□□□□□ -0.37
AC055716.1-201ENST00000550077 SRPK2P78362 688 aaKnown RBP12.72□□□□□ -0.37
AC055716.1-201ENST00000550077 LRRC4BQ9NT99 713 aa12.72□□□□□ -0.37
AC055716.1-201ENST00000550077 QRICH2Q9H0J4 1663 aa12.71□□□□□ -0.37
AC055716.1-201ENST00000550077 GPR162Q16538 588 aa12.71□□□□□ -0.37
AC055716.1-201ENST00000550077 ARHGEF25Q86VW2 580 aa12.71□□□□□ -0.37
AC055716.1-201ENST00000550077 KIAA1210Q9ULL0 1709 aa12.71□□□□□ -0.38
AC055716.1-201ENST00000550077 CPSF1Q10570 1443 aaKnown RBP12.71□□□□□ -0.38
AC055716.1-201ENST00000550077 NLGN2Q8NFZ4 835 aa12.7□□□□□ -0.38
AC055716.1-201ENST00000550077 TRPM1Q7Z4N2 1603 aa12.7□□□□□ -0.38
AC055716.1-201ENST00000550077 EXOC5O00471 708 aa12.69□□□□□ -0.38
AC055716.1-201ENST00000550077 GIGYF1O75420 1035 aaPredicted RBP12.69□□□□□ -0.38
AC055716.1-201ENST00000550077 KCNQ4P56696 695 aa12.69□□□□□ -0.38
AC055716.1-201ENST00000550077 KLHL34Q8N239 644 aa12.69□□□□□ -0.38
AC055716.1-201ENST00000550077 CARD10Q9BWT7 1032 aa12.69□□□□□ -0.38
AC055716.1-201ENST00000550077 MAP3K5Q99683 1374 aa12.69□□□□□ -0.38
AC055716.1-201ENST00000550077 PELP1Q8IZL8 1130 aaKnown RBP12.68□□□□□ -0.38
AC055716.1-201ENST00000550077 KAT6BQ8WYB5 2073 aa12.68□□□□□ -0.38
AC055716.1-201ENST00000550077 NFAT5O94916 1531 aa12.67□□□□□ -0.38
AC055716.1-201ENST00000550077 CSB-PGBD3P0DP91 1061 aa12.67□□□□□ -0.38
AC055716.1-201ENST00000550077 YBX3P16989 372 aaKnown RBP eCLIP12.67□□□□□ -0.38
AC055716.1-201ENST00000550077 TNS2Q63HR2 1409 aa12.67□□□□□ -0.38
AC055716.1-201ENST00000550077 QSER1Q2KHR3 1735 aa12.67□□□□□ -0.38
AC055716.1-201ENST00000550077 AKT1S1Q96B36 256 aa12.66□□□□□ -0.38
AC055716.1-201ENST00000550077 CDCA7Q9BWT1 371 aaPredicted RBP12.66□□□□□ -0.38
AC055716.1-201ENST00000550077 TTC21BQ7Z4L5 1316 aa12.65□□□□□ -0.38
AC055716.1-201ENST00000550077 CENPJQ9HC77 1338 aaPredicted RBP12.65□□□□□ -0.38
AC055716.1-201ENST00000550077 PNPLA7Q6ZV29 1317 aa12.64□□□□□ -0.39
AC055716.1-201ENST00000550077 LTN1O94822 1766 aa12.64□□□□□ -0.39
AC055716.1-201ENST00000550077 ABCC6O95255 1503 aa12.64□□□□□ -0.39
AC055716.1-201ENST00000550077 STAC3Q96MF2 364 aa12.64□□□□□ -0.39
AC055716.1-201ENST00000550077 BRD4O60885 1362 aaPredicted RBP12.64□□□□□ -0.39
AC055716.1-201ENST00000550077 GOLGB1Q14789 3259 aaKnown RBP12.63□□□□□ -0.39
AC055716.1-201ENST00000550077 CEP350Q5VT06 3117 aa12.62□□□□□ -0.39
AC055716.1-201ENST00000550077 CCDC7Q96M83 1385 aa12.62□□□□□ -0.39
AC055716.1-201ENST00000550077 LY75O60449 1722 aa12.61□□□□□ -0.39
AC055716.1-201ENST00000550077 NLRP2Q9NX02 1062 aa12.6□□□□□ -0.39
AC055716.1-201ENST00000550077 ATP10DQ9P241 1426 aa12.6□□□□□ -0.39
AC055716.1-201ENST00000550077 RGPD2P0DJD1 1756 aa12.59□□□□□ -0.39
AC055716.1-201ENST00000550077 KCNH5Q8NCM2 988 aa12.59□□□□□ -0.39
AC055716.1-201ENST00000550077 MON2Q7Z3U7 1717 aa12.59□□□□□ -0.39
AC055716.1-201ENST00000550077 DOT1LQ8TEK3 1739 aa12.59□□□□□ -0.39
AC055716.1-201ENST00000550077 ERBB3P21860 1342 aa12.59□□□□□ -0.39
AC055716.1-201ENST00000550077 IL2RBP14784 551 aa12.58□□□□□ -0.4
AC055716.1-201ENST00000550077 POLD1P28340 1107 aa12.57□□□□□ -0.4
AC055716.1-201ENST00000550077 NME9Q86XW9 330 aa12.57□□□□□ -0.4
AC055716.1-201ENST00000550077 DDX54Q8TDD1 881 aaKnown RBP12.57□□□□□ -0.4
AC055716.1-201ENST00000550077 ZNF526Q8TF50 670 aaPredicted RBP12.57□□□□□ -0.4
AC055716.1-201ENST00000550077 SLC16A10Q8TF71 515 aa12.57□□□□□ -0.4
AC055716.1-201ENST00000550077 TFCP2L1Q9NZI6 479 aa12.57□□□□□ -0.4
AC055716.1-201ENST00000550077 USP54Q70EL1 1684 aa12.57□□□□□ -0.4
AC055716.1-201ENST00000550077 NSD2O96028 1365 aa12.56□□□□□ -0.4
AC055716.1-201ENST00000550077 MSL1Q68DK7 614 aa12.56□□□□□ -0.4
AC055716.1-201ENST00000550077 COL23A1Q86Y22 540 aaPredicted RBP12.56□□□□□ -0.4
AC055716.1-201ENST00000550077 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.56□□□□□ -0.4
AC055716.1-201ENST00000550077 ANKRD24Q8TF21 1146 aa12.56□□□□□ -0.4
AC055716.1-201ENST00000550077 PRIM1P49642 420 aaKnown RBP12.55□□□□□ -0.4
AC055716.1-201ENST00000550077 WWC3Q9ULE0 1092 aa12.55□□□□□ -0.4
AC055716.1-201ENST00000550077 TTC21AQ8NDW8 1320 aa12.55□□□□□ -0.4
AC055716.1-201ENST00000550077 KTN1Q86UP2 1357 aaKnown RBP12.55□□□□□ -0.4
AC055716.1-201ENST00000550077 CD163L1Q9NR16 1453 aa12.54□□□□□ -0.4
AC055716.1-201ENST00000550077 ZNF692Q9BU19 519 aaPredicted RBP12.54□□□□□ -0.4
AC055716.1-201ENST00000550077 EVC2Q86UK5 1308 aa12.54□□□□□ -0.4
AC055716.1-201ENST00000550077 HSPA6P17066 643 aa12.53□□□□□ -0.4
AC055716.1-201ENST00000550077 FBLN1P23142 703 aa12.53□□□□□ -0.4
AC055716.1-201ENST00000550077 SLC27A3Q5K4L6 730 aa12.53□□□□□ -0.4
AC055716.1-201ENST00000550077 SMIM5Q71RC9 77 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms