RNA–Protein interactions for RNA: ENST00000549417.5

LIN7A-202, Transcript of lin-7 homolog A, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene LIN7A, Length 905 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7A-202ENST00000549417 GPBP1L1Q9HC44 474 aaPredicted RBP10.28□□□□□ -0.76
LIN7A-202ENST00000549417 THRAP3Q9Y2W1 955 aaKnown RBP10.28□□□□□ -0.76
LIN7A-202ENST00000549417 ATP7BP35670 1465 aa10.28□□□□□ -0.76
LIN7A-202ENST00000549417 DHX57Q6P158 1386 aaKnown RBP10.27□□□□□ -0.76
LIN7A-202ENST00000549417 ANKRD30BQ9BXX2 1392 aa10.27□□□□□ -0.76
LIN7A-202ENST00000549417 C11orf95C9JLR9 678 aaPredicted RBP10.27□□□□□ -0.77
LIN7A-202ENST00000549417 CFAP70Q5T0N1 1121 aa10.27□□□□□ -0.77
LIN7A-202ENST00000549417 MARCH10Q8NA82 808 aaPredicted RBP10.27□□□□□ -0.77
LIN7A-202ENST00000549417 SLC4A1APQ9BWU0 796 aaKnown RBP10.27□□□□□ -0.77
LIN7A-202ENST00000549417 LMO7Q8WWI1 1683 aa10.27□□□□□ -0.77
LIN7A-202ENST00000549417 COL13A1Q5TAT6 717 aaPredicted RBP10.26□□□□□ -0.77
LIN7A-202ENST00000549417 COL5A2P05997 1499 aaPredicted RBP10.25□□□□□ -0.77
LIN7A-202ENST00000549417 TULP4Q9NRJ4 1543 aa10.25□□□□□ -0.77
LIN7A-202ENST00000549417 C14orf93Q9H972 538 aaKnown RBP10.25□□□□□ -0.77
LIN7A-202ENST00000549417 PCNTO95613 3336 aa10.25□□□□□ -0.77
LIN7A-202ENST00000549417 SPATA31E1Q6ZUB1 1445 aa10.24□□□□□ -0.77
LIN7A-202ENST00000549417 AKAP12Q02952 1782 aa10.24□□□□□ -0.77
LIN7A-202ENST00000549417 ZNF827Q17R98 1081 aa10.24□□□□□ -0.77
LIN7A-202ENST00000549417 TRAK1Q9UPV9 953 aa10.24□□□□□ -0.77
LIN7A-202ENST00000549417 CRB1P82279 1406 aa10.24□□□□□ -0.77
LIN7A-202ENST00000549417 TOPAZ1Q8N9V7 1692 aa10.23□□□□□ -0.77
LIN7A-202ENST00000549417 WASLO00401 505 aaPredicted RBP10.23□□□□□ -0.77
LIN7A-202ENST00000549417 PPARGC1BQ86YN6 1023 aaKnown RBP10.23□□□□□ -0.77
LIN7A-202ENST00000549417 GRIN3BO60391 1043 aa10.22□□□□□ -0.77
LIN7A-202ENST00000549417 POLD1P28340 1107 aa10.22□□□□□ -0.77
LIN7A-202ENST00000549417 TOM1L2Q6ZVM7 507 aa10.22□□□□□ -0.77
LIN7A-202ENST00000549417 ABTB2Q8N961 1025 aa10.22□□□□□ -0.77
LIN7A-202ENST00000549417 ACSBG1Q96GR2 724 aa10.22□□□□□ -0.77
LIN7A-202ENST00000549417 CPDO75976 1380 aa10.22□□□□□ -0.77
LIN7A-202ENST00000549417 EIF3AQ14152 1382 aaKnown RBP10.21□□□□□ -0.78
LIN7A-202ENST00000549417 PAPPAQ13219 1627 aa10.21□□□□□ -0.78
LIN7A-202ENST00000549417 TNS4Q8IZW8 715 aa10.2□□□□□ -0.78
LIN7A-202ENST00000549417 DNAJC5GQ8N7S2 189 aa10.2□□□□□ -0.78
LIN7A-202ENST00000549417 NUDT16Q96DE0 195 aaKnown RBP10.2□□□□□ -0.78
LIN7A-202ENST00000549417 WNK3Q9BYP7 1800 aa10.2□□□□□ -0.78
LIN7A-202ENST00000549417 ITSN1Q15811 1721 aa10.19□□□□□ -0.78
LIN7A-202ENST00000549417 AATKQ6ZMQ8 1374 aa10.19□□□□□ -0.78
LIN7A-202ENST00000549417 GCP02774 474 aa10.19□□□□□ -0.78
LIN7A-202ENST00000549417 APLP1P51693 650 aa10.19□□□□□ -0.78
LIN7A-202ENST00000549417 PRELPP51888 382 aa10.19□□□□□ -0.78
LIN7A-202ENST00000549417 USP19O94966 1318 aa10.18□□□□□ -0.78
LIN7A-202ENST00000549417 ACEP12821 1306 aa10.18□□□□□ -0.78
LIN7A-202ENST00000549417 LRRC4BQ9NT99 713 aa10.18□□□□□ -0.78
LIN7A-202ENST00000549417 WWC3Q9ULE0 1092 aa10.18□□□□□ -0.78
LIN7A-202ENST00000549417 BCL9O00512 1426 aa10.17□□□□□ -0.78
LIN7A-202ENST00000549417 ADCY9O60503 1353 aa10.17□□□□□ -0.78
LIN7A-202ENST00000549417 KIF3CO14782 793 aa10.17□□□□□ -0.78
LIN7A-202ENST00000549417 HTRA3P83110 453 aa10.17□□□□□ -0.78
LIN7A-202ENST00000549417 KAT6BQ8WYB5 2073 aa10.17□□□□□ -0.78
LIN7A-202ENST00000549417 PNPLA7Q6ZV29 1317 aa10.16□□□□□ -0.78
LIN7A-202ENST00000549417 KCNQ4P56696 695 aa10.16□□□□□ -0.78
LIN7A-202ENST00000549417 AXIN2Q9Y2T1 843 aa10.16□□□□□ -0.78
LIN7A-202ENST00000549417 TUBGCP6Q96RT7 1819 aa10.16□□□□□ -0.78
LIN7A-202ENST00000549417 NHSQ6T4R5 1651 aa10.15□□□□□ -0.78
LIN7A-202ENST00000549417 BTAF1O14981 1849 aa10.15□□□□□ -0.78
LIN7A-202ENST00000549417 EXOC5O00471 708 aa10.15□□□□□ -0.78
LIN7A-202ENST00000549417 SLC34A2O95436 690 aa10.15□□□□□ -0.78
LIN7A-202ENST00000549417 NLRP13Q86W25 1043 aa10.15□□□□□ -0.78
LIN7A-202ENST00000549417 SLC16A10Q8TF71 515 aa10.15□□□□□ -0.78
LIN7A-202ENST00000549417 AKT1S1Q96B36 256 aa10.15□□□□□ -0.78
LIN7A-202ENST00000549417 TFCP2L1Q9NZI6 479 aa10.15□□□□□ -0.78
LIN7A-202ENST00000549417 COL24A1Q17RW2 1714 aa10.15□□□□□ -0.78
LIN7A-202ENST00000549417 ADGRB1O14514 1584 aa10.14□□□□□ -0.79
LIN7A-202ENST00000549417 MSL1Q68DK7 614 aa10.14□□□□□ -0.79
LIN7A-202ENST00000549417 CDCA7Q9BWT1 371 aaPredicted RBP10.14□□□□□ -0.79
LIN7A-202ENST00000549417 CDK19Q9BWU1 502 aa10.14□□□□□ -0.79
LIN7A-202ENST00000549417 RGPD5Q99666 1765 aa10.14□□□□□ -0.79
LIN7A-202ENST00000549417 POLR3AO14802 1390 aaPredicted RBP10.14□□□□□ -0.79
LIN7A-202ENST00000549417 WDR17Q8IZU2 1322 aa10.13□□□□□ -0.79
LIN7A-202ENST00000549417 CSB-PGBD3P0DP91 1061 aa10.13□□□□□ -0.79
LIN7A-202ENST00000549417 USP6P35125 1406 aa10.13□□□□□ -0.79
LIN7A-202ENST00000549417 QSER1Q2KHR3 1735 aa10.13□□□□□ -0.79
LIN7A-202ENST00000549417 BRD4O60885 1362 aaPredicted RBP10.13□□□□□ -0.79
LIN7A-202ENST00000549417 COL18A1P39060 1754 aa10.12□□□□□ -0.79
LIN7A-202ENST00000549417 SOX12O15370 315 aa10.12□□□□□ -0.79
LIN7A-202ENST00000549417 WDR90Q96KV7 1748 aa10.12□□□□□ -0.79
LIN7A-202ENST00000549417 NLRP6P59044 892 aa10.11□□□□□ -0.79
LIN7A-202ENST00000549417 KLRG1Q96E93 195 aa10.11□□□□□ -0.79
LIN7A-202ENST00000549417 ARHGEF28Q8N1W1 1705 aaKnown RBP10.1□□□□□ -0.79
LIN7A-202ENST00000549417 TNS2Q63HR2 1409 aa10.1□□□□□ -0.79
LIN7A-202ENST00000549417 CARD10Q9BWT7 1032 aa10.1□□□□□ -0.79
LIN7A-202ENST00000549417 CCDC61Q9Y6R9 512 aa10.1□□□□□ -0.79
LIN7A-202ENST00000549417 PLEKHG3A1L390 1219 aa10.09□□□□□ -0.79
LIN7A-202ENST00000549417 TOMM70O94826 608 aa10.09□□□□□ -0.79
LIN7A-202ENST00000549417 MPHOSPH9Q99550 1183 aa10.09□□□□□ -0.79
LIN7A-202ENST00000549417 KDM2AQ9Y2K7 1162 aa10.09□□□□□ -0.79
LIN7A-202ENST00000549417 U3KPZ7 1027 aaPredicted RBP10.09□□□□□ -0.79
LIN7A-202ENST00000549417 JMYQ8N9B5 988 aa10.08□□□□□ -0.8
LIN7A-202ENST00000549417 PPIP5K1Q6PFW1 1433 aa10.07□□□□□ -0.8
LIN7A-202ENST00000549417 SLIT3O75094 1523 aa10.07□□□□□ -0.8
LIN7A-202ENST00000549417 COL23A1Q86Y22 540 aaPredicted RBP10.07□□□□□ -0.8
LIN7A-202ENST00000549417 NMRK2Q9NPI5 230 aa10.07□□□□□ -0.8
LIN7A-202ENST00000549417 ABCC6O95255 1503 aa10.07□□□□□ -0.8
LIN7A-202ENST00000549417 CPSF1Q10570 1443 aaKnown RBP10.07□□□□□ -0.8
LIN7A-202ENST00000549417 IGSF1Q8N6C5 1336 aa10.07□□□□□ -0.8
LIN7A-202ENST00000549417 SLC27A3Q5K4L6 730 aa10.06□□□□□ -0.8
LIN7A-202ENST00000549417 CD2APQ9Y5K6 639 aa10.06□□□□□ -0.8
LIN7A-202ENST00000549417 CCDC7Q96M83 1385 aa10.05□□□□□ -0.8
LIN7A-202ENST00000549417 TRPM1Q7Z4N2 1603 aa10.05□□□□□ -0.8
LIN7A-202ENST00000549417 ARHGEF25Q86VW2 580 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms