RNA–Protein interactions for RNA: ENST00000546893.5

SLC38A1-204, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 2,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-204ENST00000546893 C22orf23Q9BZE7 217 aa17.18■□□□□ 0.34
SLC38A1-204ENST00000546893 NOB1Q9ULX3 412 aaKnown RBP17.18■□□□□ 0.34
SLC38A1-204ENST00000546893 GCC1Q96CN9 775 aa17.18■□□□□ 0.34
SLC38A1-204ENST00000546893 STK26Q9P289 416 aa17.18■□□□□ 0.34
SLC38A1-204ENST00000546893 LRRC7Q96NW7 1537 aa17.17■□□□□ 0.34
SLC38A1-204ENST00000546893 KIF24Q5T7B8 1368 aa17.17■□□□□ 0.34
SLC38A1-204ENST00000546893 AEBP2Q6ZN18 517 aaPredicted RBP17.17■□□□□ 0.34
SLC38A1-204ENST00000546893 TNNQ9UQP3 1299 aa17.17■□□□□ 0.34
SLC38A1-204ENST00000546893 CDK12Q9NYV4 1490 aaPredicted RBP17.17■□□□□ 0.34
SLC38A1-204ENST00000546893 EDC4Q6P2E9 1401 aaKnown RBP17.17■□□□□ 0.34
SLC38A1-204ENST00000546893 SPATA31D1Q6ZQQ2 1576 aa17.17■□□□□ 0.34
SLC38A1-204ENST00000546893 MINK1Q8N4C8 1332 aaPredicted RBP17.17■□□□□ 0.34
SLC38A1-204ENST00000546893 HAP1P54257 671 aaPredicted RBP17.16■□□□□ 0.34
SLC38A1-204ENST00000546893 SIRT1Q96EB6 747 aa17.16■□□□□ 0.34
SLC38A1-204ENST00000546893 GNAI1P63096 354 aa17.16■□□□□ 0.34
SLC38A1-204ENST00000546893 NUCB1Q02818 461 aa17.16■□□□□ 0.34
SLC38A1-204ENST00000546893 CHMP5Q9NZZ3 219 aa17.16■□□□□ 0.34
SLC38A1-204ENST00000546893 PTCH1Q13635 1447 aa17.16■□□□□ 0.34
SLC38A1-204ENST00000546893 IFT57Q9NWB7 429 aa17.15■□□□□ 0.34
SLC38A1-204ENST00000546893 NFE2L2Q16236 605 aa17.15■□□□□ 0.34
SLC38A1-204ENST00000546893 NUTM2DQ5VT03 806 aaPredicted RBP17.15■□□□□ 0.34
SLC38A1-204ENST00000546893 PTMSP20962 102 aa17.14■□□□□ 0.33
SLC38A1-204ENST00000546893 SNX21Q969T3 373 aa17.14■□□□□ 0.33
SLC38A1-204ENST00000546893 RBM25P49756 843 aaKnown RBP17.14■□□□□ 0.33
SLC38A1-204ENST00000546893 SAFB2Q14151 953 aaKnown RBP eCLIP17.14■□□□□ 0.33
SLC38A1-204ENST00000546893 TMEM57Q8N5G2 664 aa17.14■□□□□ 0.33
SLC38A1-204ENST00000546893 ISY1Q9ULR0 285 aaKnown RBP17.14■□□□□ 0.33
SLC38A1-204ENST00000546893 NAP1L2Q9ULW6 460 aaPredicted RBP17.14■□□□□ 0.33
SLC38A1-204ENST00000546893 HSCBQ8IWL3 235 aa17.13■□□□□ 0.33
SLC38A1-204ENST00000546893 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.13■□□□□ 0.33
SLC38A1-204ENST00000546893 CPSF1Q10570 1443 aaKnown RBP17.13■□□□□ 0.33
SLC38A1-204ENST00000546893 STAG3Q9UJ98 1225 aa17.13■□□□□ 0.33
SLC38A1-204ENST00000546893 SETD1AO15047 1707 aaKnown RBP17.13■□□□□ 0.33
SLC38A1-204ENST00000546893 A2ML1A8K2U0 1454 aa17.12■□□□□ 0.33
SLC38A1-204ENST00000546893 BMP2KLQ5H9B9 411 aa17.12■□□□□ 0.33
SLC38A1-204ENST00000546893 SMAP1Q8IYB5 467 aaPredicted RBP17.12■□□□□ 0.33
SLC38A1-204ENST00000546893 CABP1Q9NZU7 370 aa17.12■□□□□ 0.33
SLC38A1-204ENST00000546893 CIZ1Q9ULV3 898 aaPredicted RBP17.12■□□□□ 0.33
SLC38A1-204ENST00000546893 KNDC1Q76NI1 1749 aa17.11■□□□□ 0.33
SLC38A1-204ENST00000546893 TRHP20396 242 aaPredicted RBP17.11■□□□□ 0.33
SLC38A1-204ENST00000546893 KIAA1211Q6ZU35 1233 aa17.11■□□□□ 0.33
SLC38A1-204ENST00000546893 POLKQ9UBT6 870 aa17.11■□□□□ 0.33
SLC38A1-204ENST00000546893 ZHX1Q9UKY1 873 aaPredicted RBP17.11■□□□□ 0.33
SLC38A1-204ENST00000546893 TAF7LQ5H9L4 462 aa17.1■□□□□ 0.33
SLC38A1-204ENST00000546893 CHD1LQ86WJ1 897 aa17.1■□□□□ 0.33
SLC38A1-204ENST00000546893 SLKQ9H2G2 1235 aaPredicted RBP17.1■□□□□ 0.33
SLC38A1-204ENST00000546893 RIMS2Q9UQ26 1411 aa17.1■□□□□ 0.33
SLC38A1-204ENST00000546893 NCOA3Q9Y6Q9 1424 aa17.1■□□□□ 0.33
SLC38A1-204ENST00000546893 DDX11L8A8MPP1 907 aa17.1■□□□□ 0.33
SLC38A1-204ENST00000546893 PRKAR2BP31323 418 aa17.1■□□□□ 0.33
SLC38A1-204ENST00000546893 HDGFP51858 240 aaKnown RBP17.1■□□□□ 0.33
SLC38A1-204ENST00000546893 API5Q9BZZ5 524 aaKnown RBP17.09■□□□□ 0.33
SLC38A1-204ENST00000546893 TECPR2O15040 1411 aa17.08■□□□□ 0.33
SLC38A1-204ENST00000546893 ZNF853P0CG23 659 aa17.08■□□□□ 0.33
SLC38A1-204ENST00000546893 MCM4P33991 863 aa17.08■□□□□ 0.32
SLC38A1-204ENST00000546893 MFAP1P55081 439 aaKnown RBP17.08■□□□□ 0.32
SLC38A1-204ENST00000546893 MRPL50Q8N5N7 158 aaKnown RBP17.08■□□□□ 0.32
SLC38A1-204ENST00000546893 VAMP4O75379 141 aa17.07■□□□□ 0.32
SLC38A1-204ENST00000546893 ABCC4O15439 1325 aa17.07■□□□□ 0.32
SLC38A1-204ENST00000546893 ZBTB7BO15156 539 aaPredicted RBP17.07■□□□□ 0.32
SLC38A1-204ENST00000546893 ZNF692Q9BU19 519 aaPredicted RBP17.07■□□□□ 0.32
SLC38A1-204ENST00000546893 MON2Q7Z3U7 1717 aa17.06■□□□□ 0.32
SLC38A1-204ENST00000546893 WASLO00401 505 aaPredicted RBP17.05■□□□□ 0.32
SLC38A1-204ENST00000546893 IL13P35225 146 aa17.05■□□□□ 0.32
SLC38A1-204ENST00000546893 MRE11P49959 708 aa17.05■□□□□ 0.32
SLC38A1-204ENST00000546893 GZF1Q9H116 711 aaPredicted RBP17.04■□□□□ 0.32
SLC38A1-204ENST00000546893 MAP2P11137 1827 aaKnown RBP17.04■□□□□ 0.32
SLC38A1-204ENST00000546893 MAP7D2Q96T17 732 aa17.04■□□□□ 0.32
SLC38A1-204ENST00000546893 CPS1P31327 1500 aa17.04■□□□□ 0.32
SLC38A1-204ENST00000546893 NRKQ7Z2Y5 1582 aa17.03■□□□□ 0.32
SLC38A1-204ENST00000546893 COG3Q96JB2 828 aa17.03■□□□□ 0.32
SLC38A1-204ENST00000546893 AKAP12Q02952 1782 aa17.02■□□□□ 0.32
SLC38A1-204ENST00000546893 SKOR2Q2VWA4 1001 aaPredicted RBP17.02■□□□□ 0.31
SLC38A1-204ENST00000546893 FBXO31Q5XUX0 539 aaPredicted RBP17.02■□□□□ 0.31
SLC38A1-204ENST00000546893 DDIT3P35638 169 aa17.01■□□□□ 0.31
SLC38A1-204ENST00000546893 GBP4Q96PP9 640 aa17.01■□□□□ 0.31
SLC38A1-204ENST00000546893 CCDC61Q9Y6R9 512 aa17.01■□□□□ 0.31
SLC38A1-204ENST00000546893 NRXN3Q9Y4C0 1643 aa17.01■□□□□ 0.31
SLC38A1-204ENST00000546893 ITSN1Q15811 1721 aa17.01■□□□□ 0.31
SLC38A1-204ENST00000546893 C3P01024 1663 aa17.01■□□□□ 0.31
SLC38A1-204ENST00000546893 TWISTNBQ3B726 338 aaPredicted RBP17■□□□□ 0.31
SLC38A1-204ENST00000546893 IPO4Q8TEX9 1081 aaKnown RBP17■□□□□ 0.31
SLC38A1-204ENST00000546893 GRPEL1Q9HAV7 217 aa17■□□□□ 0.31
SLC38A1-204ENST00000546893 PRDM10Q9NQV6 1147 aa17■□□□□ 0.31
SLC38A1-204ENST00000546893 FAM13BQ9NYF5 915 aa17■□□□□ 0.31
SLC38A1-204ENST00000546893 UTP14CQ5TAP6 766 aaKnown RBP16.99■□□□□ 0.31
SLC38A1-204ENST00000546893 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.99■□□□□ 0.311e-6■■■■□ 22.6
SLC38A1-204ENST00000546893 LNPKQ9C0E8 428 aa16.99■□□□□ 0.31
SLC38A1-204ENST00000546893 MBIPQ9NS73 344 aa16.99■□□□□ 0.31
SLC38A1-204ENST00000546893 KIAA0232Q92628 1395 aa16.98■□□□□ 0.31
SLC38A1-204ENST00000546893 DMTNQ08495 405 aa16.98■□□□□ 0.31
SLC38A1-204ENST00000546893 CDC45O75419 566 aa16.98■□□□□ 0.31
SLC38A1-204ENST00000546893 ANKRD45Q5TZF3 282 aa16.98■□□□□ 0.31
SLC38A1-204ENST00000546893 TRAK2O60296 914 aa16.97■□□□□ 0.31
SLC38A1-204ENST00000546893 PHACTR3Q96KR7 559 aa16.97■□□□□ 0.31
SLC38A1-204ENST00000546893 OFD1O75665 1012 aa16.97■□□□□ 0.31
SLC38A1-204ENST00000546893 INTS3Q68E01 1043 aaKnown RBP16.97■□□□□ 0.31
SLC38A1-204ENST00000546893 TRIM44Q96DX7 344 aaPredicted RBP16.97■□□□□ 0.31
SLC38A1-204ENST00000546893 HSP90AB1P08238 724 aaKnown RBP16.96■□□□□ 0.31
SLC38A1-204ENST00000546893 TERF1P54274 439 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms