RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 RIMBP3Q9UFD9 1639 aa16.37■□□□□ 0.21
CPSF7-223ENST00000544669 MRPL50Q8N5N7 158 aaKnown RBP16.37■□□□□ 0.21
CPSF7-223ENST00000544669 CPS1P31327 1500 aa16.37■□□□□ 0.21
CPSF7-223ENST00000544669 CHD1LQ86WJ1 897 aa16.36■□□□□ 0.21
CPSF7-223ENST00000544669 BMP2KLQ5H9B9 411 aa16.35■□□□□ 0.21
CPSF7-223ENST00000544669 TNRQ92752 1358 aa16.35■□□□□ 0.21
CPSF7-223ENST00000544669 ZBTB7BO15156 539 aaPredicted RBP16.35■□□□□ 0.21
CPSF7-223ENST00000544669 FRAT2O75474 233 aaPredicted RBP16.35■□□□□ 0.21
CPSF7-223ENST00000544669 TWISTNBQ3B726 338 aaPredicted RBP16.34■□□□□ 0.21
CPSF7-223ENST00000544669 TBC1D2Q9BYX2 928 aa16.34■□□□□ 0.21
CPSF7-223ENST00000544669 METP08581 1390 aa16.34■□□□□ 0.21
CPSF7-223ENST00000544669 RBM25P49756 843 aaKnown RBP16.33■□□□□ 0.21
CPSF7-223ENST00000544669 HSCBQ8IWL3 235 aa16.33■□□□□ 0.21
CPSF7-223ENST00000544669 CHMP5Q9NZZ3 219 aa16.33■□□□□ 0.21
CPSF7-223ENST00000544669 TMEM2Q9UHN6 1383 aa16.33■□□□□ 0.2
CPSF7-223ENST00000544669 ABCC4O15439 1325 aa16.33■□□□□ 0.2
CPSF7-223ENST00000544669 PLEKHG3A1L390 1219 aa16.33■□□□□ 0.2
CPSF7-223ENST00000544669 ANTXR1Q9H6X2 564 aa16.33■□□□□ 0.2
CPSF7-223ENST00000544669 PTMSP20962 102 aa16.32■□□□□ 0.2
CPSF7-223ENST00000544669 L1TD1Q5T7N2 865 aaKnown RBP16.32■□□□□ 0.2
CPSF7-223ENST00000544669 TXNDC2Q86VQ3 553 aa16.32■□□□□ 0.2
CPSF7-223ENST00000544669 NME9Q86XW9 330 aa16.32■□□□□ 0.2
CPSF7-223ENST00000544669 SNX21Q969T3 373 aa16.32■□□□□ 0.2
CPSF7-223ENST00000544669 PHACTR3Q96KR7 559 aa16.32■□□□□ 0.2
CPSF7-223ENST00000544669 EMILIN1Q9Y6C2 1016 aa16.32■□□□□ 0.2
CPSF7-223ENST00000544669 NRXN3Q9Y4C0 1643 aa16.32■□□□□ 0.2
CPSF7-223ENST00000544669 TTC21BQ7Z4L5 1316 aa16.32■□□□□ 0.2
CPSF7-223ENST00000544669 HMOX1P09601 288 aa16.31■□□□□ 0.2
CPSF7-223ENST00000544669 MBIPQ9NS73 344 aa16.31■□□□□ 0.2
CPSF7-223ENST00000544669 MON2Q7Z3U7 1717 aa16.31■□□□□ 0.2
CPSF7-223ENST00000544669 KIAA0232Q92628 1395 aa16.31■□□□□ 0.2
CPSF7-223ENST00000544669 MFAP1P55081 439 aaKnown RBP16.3■□□□□ 0.2
CPSF7-223ENST00000544669 PLEKHG1Q9ULL1 1385 aa16.29■□□□□ 0.2
CPSF7-223ENST00000544669 MAP2P11137 1827 aaKnown RBP16.29■□□□□ 0.2
CPSF7-223ENST00000544669 MLECQ14165 292 aa16.29■□□□□ 0.2
CPSF7-223ENST00000544669 CIZ1Q9ULV3 898 aaPredicted RBP16.29■□□□□ 0.2
CPSF7-223ENST00000544669 TTC21AQ8NDW8 1320 aa16.29■□□□□ 0.2
CPSF7-223ENST00000544669 SENP3Q9H4L4 574 aaPredicted RBP16.29■□□□□ 0.2
CPSF7-223ENST00000544669 PTPRCP08575 1304 aa16.28■□□□□ 0.2
CPSF7-223ENST00000544669 RPAP2Q8IXW5 612 aaPredicted RBP16.28■□□□□ 0.2
CPSF7-223ENST00000544669 EID1Q9Y6B2 187 aa16.28■□□□□ 0.2
CPSF7-223ENST00000544669 ANKRD45Q5TZF3 282 aa16.27■□□□□ 0.2
CPSF7-223ENST00000544669 INTS3Q68E01 1043 aaKnown RBP16.27■□□□□ 0.2
CPSF7-223ENST00000544669 SLKQ9H2G2 1235 aaPredicted RBP16.27■□□□□ 0.2
CPSF7-223ENST00000544669 AKAP12Q02952 1782 aa16.27■□□□□ 0.2
CPSF7-223ENST00000544669 C3P01024 1663 aa16.27■□□□□ 0.19
CPSF7-223ENST00000544669 ITSN1Q15811 1721 aa16.27■□□□□ 0.19
CPSF7-223ENST00000544669 DDX11L8A8MPP1 907 aa16.26■□□□□ 0.19
CPSF7-223ENST00000544669 LNPKQ9C0E8 428 aa16.26■□□□□ 0.19
CPSF7-223ENST00000544669 ISY1Q9ULR0 285 aaKnown RBP16.26■□□□□ 0.19
CPSF7-223ENST00000544669 NRKQ7Z2Y5 1582 aa16.25■□□□□ 0.19
CPSF7-223ENST00000544669 USP31Q70CQ4 1352 aa16.25■□□□□ 0.19
CPSF7-223ENST00000544669 CHL1O00533 1208 aa16.24■□□□□ 0.19
CPSF7-223ENST00000544669 TSPOAP1O95153 1857 aa16.24■□□□□ 0.19
CPSF7-223ENST00000544669 SOS1Q07889 1333 aaPredicted RBP16.24■□□□□ 0.19
CPSF7-223ENST00000544669 HTATSF1O43719 755 aaKnown RBP16.23■□□□□ 0.19
CPSF7-223ENST00000544669 CDC45O75419 566 aa16.23■□□□□ 0.19
CPSF7-223ENST00000544669 CASC1Q6TDU7 716 aa16.23■□□□□ 0.19
CPSF7-223ENST00000544669 TSPYL6Q8N831 410 aa16.23■□□□□ 0.19
CPSF7-223ENST00000544669 ARHGEF10O15013 1369 aa16.23■□□□□ 0.19
CPSF7-223ENST00000544669 OVOS2A0A0J9YW53 1432 aa16.23■□□□□ 0.19
CPSF7-223ENST00000544669 OVOS2Q6IE36 1432 aa16.23■□□□□ 0.19
CPSF7-223ENST00000544669 MCM4P33991 863 aa16.22■□□□□ 0.19
CPSF7-223ENST00000544669 EIF4A2Q14240 407 aaKnown RBP16.22■□□□□ 0.19
CPSF7-223ENST00000544669 RRS1Q15050 365 aaKnown RBP16.22■□□□□ 0.19
CPSF7-223ENST00000544669 C8orf58Q8NAV2 365 aa16.22■□□□□ 0.19
CPSF7-223ENST00000544669 DCTPP1Q9H773 170 aa16.22■□□□□ 0.19
CPSF7-223ENST00000544669 ACEP12821 1306 aa16.22■□□□□ 0.19
CPSF7-223ENST00000544669 USP6P35125 1406 aa16.22■□□□□ 0.19
CPSF7-223ENST00000544669 HMMRO75330 724 aa16.22■□□□□ 0.19
CPSF7-223ENST00000544669 SULT6B1Q6IMI4 303 aa16.22■□□□□ 0.19
CPSF7-223ENST00000544669 CHMP4AQ9BY43 222 aa16.22■□□□□ 0.19
CPSF7-223ENST00000544669 TBX22Q9Y458 520 aa16.22■□□□□ 0.19
CPSF7-223ENST00000544669 ADAMTS13Q76LX8 1427 aa16.21■□□□□ 0.19
CPSF7-223ENST00000544669 ROBO2Q9HCK4 1378 aa16.21■□□□□ 0.19
CPSF7-223ENST00000544669 PRR36Q9H6K5 1346 aa16.21■□□□□ 0.19
CPSF7-223ENST00000544669 PLPPR3Q6T4P5 718 aa16.21■□□□□ 0.19
CPSF7-223ENST00000544669 RTF1Q92541 710 aaKnown RBP16.21■□□□□ 0.19
CPSF7-223ENST00000544669 THUMPD2Q9BTF0 503 aaKnown RBP16.21■□□□□ 0.19
CPSF7-223ENST00000544669 SKOR2Q2VWA4 1001 aaPredicted RBP16.2■□□□□ 0.18
CPSF7-223ENST00000544669 IL27Q8NEV9 243 aa16.2■□□□□ 0.18
CPSF7-223ENST00000544669 GBP4Q96PP9 640 aa16.2■□□□□ 0.18
CPSF7-223ENST00000544669 UBR1Q8IWV7 1749 aa16.2■□□□□ 0.18
CPSF7-223ENST00000544669 FBLN1P23142 703 aa16.19■□□□□ 0.18
CPSF7-223ENST00000544669 ANKRD44Q8N8A2 993 aa16.19■□□□□ 0.18
CPSF7-223ENST00000544669 GAS2L2Q8NHY3 880 aa16.19■□□□□ 0.18
CPSF7-223ENST00000544669 BABAM1Q9NWV8 329 aa16.19■□□□□ 0.18
CPSF7-223ENST00000544669 NCOA3Q9Y6Q9 1424 aa16.19■□□□□ 0.18
CPSF7-223ENST00000544669 HSP90AB1P08238 724 aaKnown RBP16.19■□□□□ 0.18
CPSF7-223ENST00000544669 ZRANB1Q9UGI0 708 aa16.19■□□□□ 0.18
CPSF7-223ENST00000544669 ELL2O00472 640 aaPredicted RBP16.18■□□□□ 0.18
CPSF7-223ENST00000544669 CCT4P50991 539 aaKnown RBP16.18■□□□□ 0.18
CPSF7-223ENST00000544669 SBNO1A3KN83 1393 aa16.18■□□□□ 0.18
CPSF7-223ENST00000544669 FLT4P35916 1363 aa16.18■□□□□ 0.18
CPSF7-223ENST00000544669 TOPAZ1Q8N9V7 1692 aa16.17■□□□□ 0.18
CPSF7-223ENST00000544669 SSH2Q76I76 1423 aa16.16■□□□□ 0.18
CPSF7-223ENST00000544669 SIRT2Q8IXJ6 389 aa16.16■□□□□ 0.18
CPSF7-223ENST00000544669 THEMISQ8N1K5 641 aaPredicted RBP16.16■□□□□ 0.18
CPSF7-223ENST00000544669 DIP2AQ14689 1571 aa16.16■□□□□ 0.18
CPSF7-223ENST00000544669 HSP90AA1P07900 732 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms