RNA–Protein interactions for RNA: ENST00000543957.5

ITM2C-209, Transcript of integral membrane protein 2C, humanhuman

TSL 5

Gene ITM2C, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-209ENST00000543957 GPR162Q16538 588 aa17.95■□□□□ 0.46
ITM2C-209ENST00000543957 MARCH10Q8NA82 808 aaPredicted RBP17.95■□□□□ 0.46
ITM2C-209ENST00000543957 LRRC37A3O60309 1634 aa17.94■□□□□ 0.46
ITM2C-209ENST00000543957 PLEKHG3A1L390 1219 aa17.94■□□□□ 0.46
ITM2C-209ENST00000543957 ZBTB7CA1YPR0 619 aa17.94■□□□□ 0.46
ITM2C-209ENST00000543957 TOM1L2Q6ZVM7 507 aa17.94■□□□□ 0.46
ITM2C-209ENST00000543957 BCL9O00512 1426 aa17.94■□□□□ 0.46
ITM2C-209ENST00000543957 MAP3K5Q99683 1374 aa17.93■□□□□ 0.46
ITM2C-209ENST00000543957 CEP350Q5VT06 3117 aa17.93■□□□□ 0.46
ITM2C-209ENST00000543957 KDM2AQ9Y2K7 1162 aa17.93■□□□□ 0.46
ITM2C-209ENST00000543957 AATKQ6ZMQ8 1374 aa17.91■□□□□ 0.46
ITM2C-209ENST00000543957 CDCA7Q9BWT1 371 aaPredicted RBP17.91■□□□□ 0.46
ITM2C-209ENST00000543957 DCAF11Q8TEB1 546 aa17.89■□□□□ 0.45
ITM2C-209ENST00000543957 TOPAZ1Q8N9V7 1692 aa17.87■□□□□ 0.45
ITM2C-209ENST00000543957 WDR17Q8IZU2 1322 aa17.87■□□□□ 0.45
ITM2C-209ENST00000543957 EXOC5O00471 708 aa17.86■□□□□ 0.45
ITM2C-209ENST00000543957 NLRP6P59044 892 aa17.86■□□□□ 0.45
ITM2C-209ENST00000543957 PELP1Q8IZL8 1130 aaKnown RBP17.86■□□□□ 0.45
ITM2C-209ENST00000543957 ARHGEF28Q8N1W1 1705 aaKnown RBP17.86■□□□□ 0.45
ITM2C-209ENST00000543957 KLHL34Q8N239 644 aa17.85■□□□□ 0.45
ITM2C-209ENST00000543957 AXIN2Q9Y2T1 843 aa17.85■□□□□ 0.45
ITM2C-209ENST00000543957 AKAP12Q02952 1782 aa17.84■□□□□ 0.45
ITM2C-209ENST00000543957 STAC3Q96MF2 364 aa17.84■□□□□ 0.45
ITM2C-209ENST00000543957 CARD10Q9BWT7 1032 aa17.83■□□□□ 0.44
ITM2C-209ENST00000543957 PPIP5K1Q6PFW1 1433 aa17.82■□□□□ 0.44
ITM2C-209ENST00000543957 BRD4O60885 1362 aaPredicted RBP17.82■□□□□ 0.44
ITM2C-209ENST00000543957 SHANK3Q9BYB0 1731 aa17.82■□□□□ 0.44
ITM2C-209ENST00000543957 WNK3Q9BYP7 1800 aa17.82■□□□□ 0.44
ITM2C-209ENST00000543957 GOLGB1Q14789 3259 aaKnown RBP17.82■□□□□ 0.44
ITM2C-209ENST00000543957 CSB-PGBD3P0DP91 1061 aa17.81■□□□□ 0.44
ITM2C-209ENST00000543957 POLD1P28340 1107 aa17.81■□□□□ 0.44
ITM2C-209ENST00000543957 SRPK2P78362 688 aaKnown RBP17.8■□□□□ 0.44
ITM2C-209ENST00000543957 ZNF827Q17R98 1081 aa17.8■□□□□ 0.44
ITM2C-209ENST00000543957 ACSBG1Q96GR2 724 aa17.8■□□□□ 0.44
ITM2C-209ENST00000543957 SLIT3O75094 1523 aa17.8■□□□□ 0.44
ITM2C-209ENST00000543957 COL18A1P39060 1754 aa17.79■□□□□ 0.44
ITM2C-209ENST00000543957 SLC16A10Q8TF71 515 aa17.79■□□□□ 0.44
ITM2C-209ENST00000543957 ARHGEF25Q86VW2 580 aa17.78■□□□□ 0.44
ITM2C-209ENST00000543957 PAPPAQ13219 1627 aa17.78■□□□□ 0.44
ITM2C-209ENST00000543957 GRIN3BO60391 1043 aa17.77■□□□□ 0.44
ITM2C-209ENST00000543957 NLGN2Q8NFZ4 835 aa17.77■□□□□ 0.44
ITM2C-209ENST00000543957 CABP2Q9NPB3 220 aa17.77■□□□□ 0.44
ITM2C-209ENST00000543957 LRRC4BQ9NT99 713 aa17.77■□□□□ 0.44
ITM2C-209ENST00000543957 USP6P35125 1406 aa17.77■□□□□ 0.44
ITM2C-209ENST00000543957 CPSF1Q10570 1443 aaKnown RBP17.77■□□□□ 0.44
ITM2C-209ENST00000543957 TNS2Q63HR2 1409 aa17.76■□□□□ 0.43
ITM2C-209ENST00000543957 NHSQ6T4R5 1651 aa17.75■□□□□ 0.43
ITM2C-209ENST00000543957 YBX3P16989 372 aaKnown RBP eCLIP17.75■□□□□ 0.431e-6■□□□□ 8.8
ITM2C-209ENST00000543957 HSPA6P17066 643 aa17.75■□□□□ 0.43
ITM2C-209ENST00000543957 AKT1S1Q96B36 256 aa17.75■□□□□ 0.43
ITM2C-209ENST00000543957 CABP1Q9NZU7 370 aa17.75■□□□□ 0.43
ITM2C-209ENST00000543957 CCDC7Q96M83 1385 aa17.75■□□□□ 0.43
ITM2C-209ENST00000543957 KCNH5Q8NCM2 988 aa17.74■□□□□ 0.43
ITM2C-209ENST00000543957 ATP10DQ9P241 1426 aa17.73■□□□□ 0.43
ITM2C-209ENST00000543957 GPBP1L1Q9HC44 474 aaPredicted RBP17.73■□□□□ 0.43
ITM2C-209ENST00000543957 SOX12O15370 315 aa17.72■□□□□ 0.43
ITM2C-209ENST00000543957 PNPLA7Q6ZV29 1317 aa17.72■□□□□ 0.43
ITM2C-209ENST00000543957 TFCP2L1Q9NZI6 479 aa17.7■□□□□ 0.42
ITM2C-209ENST00000543957 RGPD5Q99666 1765 aa17.7■□□□□ 0.42
ITM2C-209ENST00000543957 PIK3C2AO00443 1686 aa17.7■□□□□ 0.42
ITM2C-209ENST00000543957 TRPM1Q7Z4N2 1603 aa17.69■□□□□ 0.42
ITM2C-209ENST00000543957 ABCC6O95255 1503 aa17.69■□□□□ 0.42
ITM2C-209ENST00000543957 SLC27A3Q5K4L6 730 aa17.69■□□□□ 0.42
ITM2C-209ENST00000543957 BTAF1O14981 1849 aa17.69■□□□□ 0.42
ITM2C-209ENST00000543957 COL24A1Q17RW2 1714 aa17.68■□□□□ 0.42
ITM2C-209ENST00000543957 CENPJQ9HC77 1338 aaPredicted RBP17.68■□□□□ 0.42
ITM2C-209ENST00000543957 KAT6BQ8WYB5 2073 aa17.67■□□□□ 0.42
ITM2C-209ENST00000543957 NBPF1Q3BBV0 1214 aa17.67■□□□□ 0.42
ITM2C-209ENST00000543957 IL2RBP14784 551 aa17.66■□□□□ 0.42
ITM2C-209ENST00000543957 ZNF526Q8TF50 670 aaPredicted RBP17.66■□□□□ 0.42
ITM2C-209ENST00000543957 NLRP2Q9NX02 1062 aa17.66■□□□□ 0.42
ITM2C-209ENST00000543957 TTC21BQ7Z4L5 1316 aa17.66■□□□□ 0.42
ITM2C-209ENST00000543957 QSER1Q2KHR3 1735 aa17.65■□□□□ 0.42
ITM2C-209ENST00000543957 KCNQ4P56696 695 aa17.64■□□□□ 0.41
ITM2C-209ENST00000543957 ZNF692Q9BU19 519 aaPredicted RBP17.64■□□□□ 0.41
ITM2C-209ENST00000543957 RAB3GAP2Q9H2M9 1393 aa17.64■□□□□ 0.41
ITM2C-209ENST00000543957 QRICH2Q9H0J4 1663 aa17.62■□□□□ 0.41
ITM2C-209ENST00000543957 ERBB3P21860 1342 aa17.62■□□□□ 0.41
ITM2C-209ENST00000543957 TTC21AQ8NDW8 1320 aa17.62■□□□□ 0.41
ITM2C-209ENST00000543957 ADCY9O60503 1353 aa17.62■□□□□ 0.41
ITM2C-209ENST00000543957 NFAT5O94916 1531 aa17.62■□□□□ 0.41
ITM2C-209ENST00000543957 KIAA1210Q9ULL0 1709 aa17.61■□□□□ 0.41
ITM2C-209ENST00000543957 MSH5O43196 834 aa17.61■□□□□ 0.41
ITM2C-209ENST00000543957 DDX54Q8TDD1 881 aaKnown RBP17.59■□□□□ 0.41
ITM2C-209ENST00000543957 CD2APQ9Y5K6 639 aa17.59■□□□□ 0.41
ITM2C-209ENST00000543957 TUBGCP6Q96RT7 1819 aa17.58■□□□□ 0.41
ITM2C-209ENST00000543957 EVC2Q86UK5 1308 aa17.58■□□□□ 0.4
ITM2C-209ENST00000543957 COL23A1Q86Y22 540 aaPredicted RBP17.58■□□□□ 0.4
ITM2C-209ENST00000543957 SYTL4Q96C24 671 aaPredicted RBP17.58■□□□□ 0.4
ITM2C-209ENST00000543957 PRIM1P49642 420 aaKnown RBP17.57■□□□□ 0.4
ITM2C-209ENST00000543957 APLP1P51693 650 aa17.57■□□□□ 0.4
ITM2C-209ENST00000543957 MSL1Q68DK7 614 aa17.57■□□□□ 0.4
ITM2C-209ENST00000543957 ANKRD24Q8TF21 1146 aa17.57■□□□□ 0.4
ITM2C-209ENST00000543957 KIF3CO14782 793 aa17.56■□□□□ 0.4
ITM2C-209ENST00000543957 CCNL1Q9UK58 526 aaPredicted RBP17.55■□□□□ 0.4
ITM2C-209ENST00000543957 DNAJC5GQ8N7S2 189 aa17.54■□□□□ 0.4
ITM2C-209ENST00000543957 KTN1Q86UP2 1357 aaKnown RBP17.53■□□□□ 0.4
ITM2C-209ENST00000543957 ANKRD36BQ8N2N9 1353 aa17.53■□□□□ 0.4
ITM2C-209ENST00000543957 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.51■□□□□ 0.39
ITM2C-209ENST00000543957 NSD2O96028 1365 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms