RNA–Protein interactions for RNA: ENST00000540638.6

EPB41L3-204, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EPB41L3, Length 3,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-204ENST00000540638 EIF4A2Q14240 407 aaKnown RBP21.53■■□□□ 1.04
EPB41L3-204ENST00000540638 ROBO2Q9HCK4 1378 aa21.53■■□□□ 1.04
EPB41L3-204ENST00000540638 XPCQ01831 940 aaPredicted RBP21.53■■□□□ 1.04
EPB41L3-204ENST00000540638 LMOD3Q0VAK6 560 aa21.53■■□□□ 1.04
EPB41L3-204ENST00000540638 TMEM131LA2VDJ0 1609 aa21.53■■□□□ 1.04
EPB41L3-204ENST00000540638 NFKBIBQ15653 356 aa21.51■■□□□ 1.03
EPB41L3-204ENST00000540638 ABTB2Q8N961 1025 aa21.51■■□□□ 1.03
EPB41L3-204ENST00000540638 RTN4Q9NQC3 1192 aaKnown RBP21.5■■□□□ 1.03
EPB41L3-204ENST00000540638 DIP2BQ9P265 1576 aa21.5■■□□□ 1.03
EPB41L3-204ENST00000540638 MYO3AQ8NEV4 1616 aa21.5■■□□□ 1.03
EPB41L3-204ENST00000540638 TMEM2Q9UHN6 1383 aa21.5■■□□□ 1.03
EPB41L3-204ENST00000540638 USHBP1Q8N6Y0 703 aa21.5■■□□□ 1.03
EPB41L3-204ENST00000540638 VAMP4O75379 141 aa21.49■■□□□ 1.03
EPB41L3-204ENST00000540638 HSP90AA1P07900 732 aaKnown RBP21.49■■□□□ 1.03
EPB41L3-204ENST00000540638 ARHGEF40Q8TER5 1519 aa21.49■■□□□ 1.03
EPB41L3-204ENST00000540638 FRAT2O75474 233 aaPredicted RBP21.48■■□□□ 1.03
EPB41L3-204ENST00000540638 CT47B1P0C2W7 299 aaPredicted RBP21.48■■□□□ 1.03
EPB41L3-204ENST00000540638 CD163L1Q9NR16 1453 aa21.48■■□□□ 1.03
EPB41L3-204ENST00000540638 THEMISQ8N1K5 641 aaPredicted RBP21.48■■□□□ 1.03
EPB41L3-204ENST00000540638 FOXD4L1Q9NU39 408 aa21.48■■□□□ 1.03
EPB41L3-204ENST00000540638 TSPYL4Q9UJ04 414 aa21.47■■□□□ 1.03
EPB41L3-204ENST00000540638 KCNA6P17658 529 aa21.46■■□□□ 1.03
EPB41L3-204ENST00000540638 EDC4Q6P2E9 1401 aaKnown RBP21.45■■□□□ 1.02
EPB41L3-204ENST00000540638 ZNF428Q96B54 188 aa21.45■■□□□ 1.02
EPB41L3-204ENST00000540638 IQSEC2Q5JU85 1478 aa21.44■■□□□ 1.02
EPB41L3-204ENST00000540638 IFT57Q9NWB7 429 aa21.44■■□□□ 1.02
EPB41L3-204ENST00000540638 IL16Q14005 1332 aa21.44■■□□□ 1.02
EPB41L3-204ENST00000540638 SLC4A2P04920 1241 aa21.44■■□□□ 1.02
EPB41L3-204ENST00000540638 CFAP44Q96MT7 982 aa21.44■■□□□ 1.02
EPB41L3-204ENST00000540638 ZBTB40Q9NUA8 1239 aa21.43■■□□□ 1.02
EPB41L3-204ENST00000540638 F6X3S4 739 aa21.43■■□□□ 1.02
EPB41L3-204ENST00000540638 ESCO1Q5FWF5 840 aa21.42■■□□□ 1.02
EPB41L3-204ENST00000540638 MRPL50Q8N5N7 158 aaKnown RBP21.42■■□□□ 1.02
EPB41L3-204ENST00000540638 C22orf23Q9BZE7 217 aa21.42■■□□□ 1.02
EPB41L3-204ENST00000540638 MAP3K19Q56UN5 1328 aa21.42■■□□□ 1.02
EPB41L3-204ENST00000540638 SHPRHQ149N8 1683 aa21.41■■□□□ 1.02
EPB41L3-204ENST00000540638 ALDH1L2Q3SY69 923 aa21.41■■□□□ 1.02
EPB41L3-204ENST00000540638 EIF2S2P20042 333 aaKnown RBP21.4■■□□□ 1.02
EPB41L3-204ENST00000540638 PSME1Q06323 249 aa21.4■■□□□ 1.02
EPB41L3-204ENST00000540638 AAMPQ13685 434 aa21.4■■□□□ 1.02
EPB41L3-204ENST00000540638 CHD1LQ86WJ1 897 aa21.4■■□□□ 1.02
EPB41L3-204ENST00000540638 API5Q9BZZ5 524 aaKnown RBP21.4■■□□□ 1.02
EPB41L3-204ENST00000540638 MTHFSDQ2M296 383 aaKnown RBP21.37■■□□□ 1.01
EPB41L3-204ENST00000540638 GZF1Q9H116 711 aaPredicted RBP21.37■■□□□ 1.01
EPB41L3-204ENST00000540638 STK31Q9BXU1 1019 aa21.37■■□□□ 1.01
EPB41L3-204ENST00000540638 PNPLA6Q8IY17 1366 aa21.37■■□□□ 1.01
EPB41L3-204ENST00000540638 CPS1P31327 1500 aa21.36■■□□□ 1.01
EPB41L3-204ENST00000540638 SMARCA5O60264 1052 aaPredicted RBP21.36■■□□□ 1.01
EPB41L3-204ENST00000540638 FKBP5Q13451 457 aaPredicted RBP21.36■■□□□ 1.01
EPB41L3-204ENST00000540638 CHMP4BQ9H444 224 aaKnown RBP21.36■■□□□ 1.01
EPB41L3-204ENST00000540638 LRRC7Q96NW7 1537 aa21.35■■□□□ 1.01
EPB41L3-204ENST00000540638 EYA1Q99502 592 aa21.35■■□□□ 1.01
EPB41L3-204ENST00000540638 NLRP1Q9C000 1473 aa21.35■■□□□ 1.01
EPB41L3-204ENST00000540638 ZBTB7BO15156 539 aaPredicted RBP21.34■■□□□ 1.01
EPB41L3-204ENST00000540638 HDAC1Q13547 482 aaPredicted RBP21.34■■□□□ 1.01
EPB41L3-204ENST00000540638 ATP7BP35670 1465 aa21.34■■□□□ 1.01
EPB41L3-204ENST00000540638 HSCBQ8IWL3 235 aa21.34■■□□□ 1.01
EPB41L3-204ENST00000540638 C16orf71Q8IYS4 520 aaPredicted RBP21.33■■□□□ 1.01
EPB41L3-204ENST00000540638 FAM135BQ49AJ0 1406 aa21.33■■□□□ 1
EPB41L3-204ENST00000540638 HSP90AB1P08238 724 aaKnown RBP21.33■■□□□ 1
EPB41L3-204ENST00000540638 TBC1D2Q9BYX2 928 aa21.32■■□□□ 1
EPB41L3-204ENST00000540638 USP19O94966 1318 aa21.32■■□□□ 1
EPB41L3-204ENST00000540638 COL3A1P02461 1466 aaPredicted RBP21.31■■□□□ 1
EPB41L3-204ENST00000540638 G2E3Q7L622 706 aa21.31■■□□□ 1
EPB41L3-204ENST00000540638 MEIS3Q99687 375 aa21.31■■□□□ 1
EPB41L3-204ENST00000540638 SMC5Q8IY18 1101 aa21.31■■□□□ 1
EPB41L3-204ENST00000540638 CPSF1Q10570 1443 aaKnown RBP21.3■■□□□ 1
EPB41L3-204ENST00000540638 TBC1D32Q96NH3 1257 aa21.3■■□□□ 1
EPB41L3-204ENST00000540638 PLEKHG3A1L390 1219 aa21.29■■□□□ 1
EPB41L3-204ENST00000540638 USP35Q9P2H5 1018 aa21.29■■□□□ 1
EPB41L3-204ENST00000540638 NUCB1Q02818 461 aa21.29■■□□□ 1
EPB41L3-204ENST00000540638 ANKLE2Q86XL3 938 aa21.29■■□□□ 1
EPB41L3-204ENST00000540638 HAP1P54257 671 aaPredicted RBP21.28■■□□□ 1
EPB41L3-204ENST00000540638 TBX22Q9Y458 520 aa21.28■■□□□ 1
EPB41L3-204ENST00000540638 AGLP35573 1532 aa21.28■■□□□ 1
EPB41L3-204ENST00000540638 GSE1Q14687 1217 aa21.28■■□□□ 1
EPB41L3-204ENST00000540638 PHF8Q9UPP1 1060 aa21.28■■□□□ 1
EPB41L3-204ENST00000540638 SPATA31D1Q6ZQQ2 1576 aa21.27■■□□□ 1
EPB41L3-204ENST00000540638 MAP2P11137 1827 aaKnown RBP21.27■■□□□ 1
EPB41L3-204ENST00000540638 TSHZ3Q63HK5 1081 aa21.27■□□□□ 0.99
EPB41L3-204ENST00000540638 ANXA1P04083 346 aa21.26■□□□□ 0.99
EPB41L3-204ENST00000540638 ADAMTS13Q76LX8 1427 aa21.26■□□□□ 0.99
EPB41L3-204ENST00000540638 OTUD7AQ8TE49 926 aaPredicted RBP21.26■□□□□ 0.99
EPB41L3-204ENST00000540638 EXOC6BQ9Y2D4 811 aa21.26■□□□□ 0.99
EPB41L3-204ENST00000540638 GAS2L2Q8NHY3 880 aa21.25■□□□□ 0.99
EPB41L3-204ENST00000540638 LRRC59Q96AG4 307 aaKnown RBP21.25■□□□□ 0.99
EPB41L3-204ENST00000540638 GCC1Q96CN9 775 aa21.25■□□□□ 0.99
EPB41L3-204ENST00000540638 ZNF853P0CG23 659 aa21.25■□□□□ 0.99
EPB41L3-204ENST00000540638 SIRT2Q8IXJ6 389 aa21.25■□□□□ 0.99
EPB41L3-204ENST00000540638 NCBP3Q53F19 620 aaKnown RBP21.24■□□□□ 0.99
EPB41L3-204ENST00000540638 PLEKHG1Q9ULL1 1385 aa21.24■□□□□ 0.99
EPB41L3-204ENST00000540638 USP6P35125 1406 aa21.23■□□□□ 0.99
EPB41L3-204ENST00000540638 SIRT1Q96EB6 747 aa21.23■□□□□ 0.99
EPB41L3-204ENST00000540638 MED14O60244 1454 aa21.23■□□□□ 0.99
EPB41L3-204ENST00000540638 AATKQ6ZMQ8 1374 aa21.23■□□□□ 0.99
EPB41L3-204ENST00000540638 CHL1O00533 1208 aa21.23■□□□□ 0.99
EPB41L3-204ENST00000540638 USP32Q8NFA0 1604 aa21.23■□□□□ 0.99
EPB41L3-204ENST00000540638 GNAT3A8MTJ3 354 aa21.22■□□□□ 0.99
EPB41L3-204ENST00000540638 ZC3H6P61129 1189 aaKnown RBP21.22■□□□□ 0.99
EPB41L3-204ENST00000540638 RBM42Q9BTD8 480 aaKnown RBP21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms