RNA–Protein interactions for RNA: ENST00000540430.5

LDHA-218, Transcript of lactate dehydrogenase A, humanhuman

TSL 2 BASIC

Gene LDHA, Length 2,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-218ENST00000540430 SLC4A3P48751 1232 aa12.06□□□□□ -0.48
LDHA-218ENST00000540430 CRBNQ96SW2 442 aa12.06□□□□□ -0.48
LDHA-218ENST00000540430 FAM83GA6ND36 823 aa12.05□□□□□ -0.48
LDHA-218ENST00000540430 RRP9O43818 475 aaKnown RBP12.05□□□□□ -0.48
LDHA-218ENST00000540430 PARD3Q8TEW0 1356 aa12.05□□□□□ -0.48
LDHA-218ENST00000540430 BLMP54132 1417 aaPredicted RBP12.05□□□□□ -0.48
LDHA-218ENST00000540430 ONECUT3O60422 494 aaPredicted RBP12.05□□□□□ -0.48
LDHA-218ENST00000540430 NGDNQ8NEJ9 315 aaKnown RBP12.05□□□□□ -0.48
LDHA-218ENST00000540430 ITSN1Q15811 1721 aa12.05□□□□□ -0.48
LDHA-218ENST00000540430 VIRMAQ69YN4 1812 aaKnown RBP12.05□□□□□ -0.48
LDHA-218ENST00000540430 SEPT12Q8IYM1 358 aa12.04□□□□□ -0.48
LDHA-218ENST00000540430 KIAA1210Q9ULL0 1709 aa12.04□□□□□ -0.48
LDHA-218ENST00000540430 BRWD3Q6RI45 1802 aa12.04□□□□□ -0.48
LDHA-218ENST00000540430 ATP7BP35670 1465 aa12.04□□□□□ -0.48
LDHA-218ENST00000540430 CCDC9Q9Y3X0 531 aaKnown RBP12.04□□□□□ -0.48
LDHA-218ENST00000540430 RRAGDQ9NQL2 400 aaPredicted RBP12.03□□□□□ -0.48
LDHA-218ENST00000540430 COL14A1Q05707 1796 aaKnown RBP12.03□□□□□ -0.48
LDHA-218ENST00000540430 NRAPQ86VF7 1730 aa12.03□□□□□ -0.48
LDHA-218ENST00000540430 NUDT16Q96DE0 195 aaKnown RBP12.03□□□□□ -0.48
LDHA-218ENST00000540430 ZRANB1Q9UGI0 708 aa12.03□□□□□ -0.48
LDHA-218ENST00000540430 POLR3GLQ9BT43 218 aa12.02□□□□□ -0.49
LDHA-218ENST00000540430 CRYBG1Q9Y4K1 1723 aa12.02□□□□□ -0.49
LDHA-218ENST00000540430 BTG4Q9NY30 223 aa12.02□□□□□ -0.49
LDHA-218ENST00000540430 CLCN1P35523 988 aa12.01□□□□□ -0.49
LDHA-218ENST00000540430 CNGB1Q14028 1251 aaPredicted RBP12.01□□□□□ -0.49
LDHA-218ENST00000540430 HSP90AA2PQ14568 343 aaPredicted RBP12.01□□□□□ -0.49
LDHA-218ENST00000540430 CDK19Q9BWU1 502 aa12.01□□□□□ -0.49
LDHA-218ENST00000540430 SENP3-EIF4A1A0A087X0R7 540 aa12□□□□□ -0.49
LDHA-218ENST00000540430 PLIN1O60240 522 aa12□□□□□ -0.49
LDHA-218ENST00000540430 KRT27Q7Z3Y8 459 aa12□□□□□ -0.49
LDHA-218ENST00000540430 CDCA7LQ96GN5 454 aa12□□□□□ -0.49
LDHA-218ENST00000540430 TOPAZ1Q8N9V7 1692 aa12□□□□□ -0.49
LDHA-218ENST00000540430 POLR3AO14802 1390 aaPredicted RBP12□□□□□ -0.49
LDHA-218ENST00000540430 CCDC61Q9Y6R9 512 aa11.99□□□□□ -0.49
LDHA-218ENST00000540430 SF3B2Q13435 895 aaKnown RBP11.99□□□□□ -0.49
LDHA-218ENST00000540430 SKAP1Q86WV1 359 aa11.99□□□□□ -0.49
LDHA-218ENST00000540430 PRDM11Q9NQV5 511 aa11.99□□□□□ -0.49
LDHA-218ENST00000540430 NBPF1Q3BBV0 1214 aa11.98□□□□□ -0.49
LDHA-218ENST00000540430 A0A0G2JS52 829 aa11.98□□□□□ -0.49
LDHA-218ENST00000540430 PLEKHG3A1L390 1219 aa11.98□□□□□ -0.49
LDHA-218ENST00000540430 BECN1Q14457 450 aa11.98□□□□□ -0.49
LDHA-218ENST00000540430 FAM98CQ17RN3 349 aaKnown RBP11.98□□□□□ -0.49
LDHA-218ENST00000540430 PNNQ9H307 717 aaKnown RBP11.98□□□□□ -0.49
LDHA-218ENST00000540430 ACEP12821 1306 aa11.97□□□□□ -0.49
LDHA-218ENST00000540430 SPATA31A5Q5VU36 1347 aa11.97□□□□□ -0.49
LDHA-218ENST00000540430 SPATA31A7Q8IWB4 1347 aa11.97□□□□□ -0.49
LDHA-218ENST00000540430 HSP90AA1P07900 732 aaKnown RBP11.97□□□□□ -0.49
LDHA-218ENST00000540430 PHRF1Q9P1Y6 1649 aaKnown RBP11.97□□□□□ -0.49
LDHA-218ENST00000540430 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.97□□□□□ -0.49
LDHA-218ENST00000540430 CARD11Q9BXL7 1154 aa11.97□□□□□ -0.49
LDHA-218ENST00000540430 KIAA0232Q92628 1395 aa11.97□□□□□ -0.49
LDHA-218ENST00000540430 DEFB132Q7Z7B7 95 aa11.96□□□□□ -0.49
LDHA-218ENST00000540430 CENPJQ9HC77 1338 aaPredicted RBP11.96□□□□□ -0.5
LDHA-218ENST00000540430 THSD7AQ9UPZ6 1657 aa11.95□□□□□ -0.5
LDHA-218ENST00000540430 FSD2A1L4K1 749 aa11.94□□□□□ -0.5
LDHA-218ENST00000540430 C20orf194Q5TEA3 1177 aa11.94□□□□□ -0.5
LDHA-218ENST00000540430 SRPK2P78362 688 aaKnown RBP11.94□□□□□ -0.5
LDHA-218ENST00000540430 NUTM2GQ5VZR2 741 aa11.94□□□□□ -0.5
LDHA-218ENST00000540430 NAP1L5Q96NT1 182 aaPredicted RBP11.94□□□□□ -0.5
LDHA-218ENST00000540430 USP19O94966 1318 aa11.94□□□□□ -0.5
LDHA-218ENST00000540430 SPATA31A1Q5TZJ5 1347 aa11.94□□□□□ -0.5
LDHA-218ENST00000540430 ST20-MTHFSA0A0A6YYL1 179 aa11.93□□□□□ -0.5
LDHA-218ENST00000540430 PER1O15534 1290 aaPredicted RBP11.93□□□□□ -0.5
LDHA-218ENST00000540430 ZC3H6P61129 1189 aaKnown RBP11.93□□□□□ -0.5
LDHA-218ENST00000540430 CHRNA2Q15822 529 aa11.93□□□□□ -0.5
LDHA-218ENST00000540430 PPIP5K1Q6PFW1 1433 aa11.93□□□□□ -0.5
LDHA-218ENST00000540430 ABTB2Q8N961 1025 aa11.93□□□□□ -0.5
LDHA-218ENST00000540430 GOLGA6L3A6NEY3 463 aa11.93□□□□□ -0.5
LDHA-218ENST00000540430 QRICH2Q9H0J4 1663 aa11.93□□□□□ -0.5
LDHA-218ENST00000540430 NRKQ7Z2Y5 1582 aa11.92□□□□□ -0.5
LDHA-218ENST00000540430 BAG6P46379 1132 aa11.92□□□□□ -0.5
LDHA-218ENST00000540430 ANTXR1Q9H6X2 564 aa11.92□□□□□ -0.5
LDHA-218ENST00000540430 CPDO75976 1380 aa11.92□□□□□ -0.5
LDHA-218ENST00000540430 XRCC6P12956 609 aaKnown RBP eCLIP11.92□□□□□ -0.5
LDHA-218ENST00000540430 AAMPQ13685 434 aa11.92□□□□□ -0.5
LDHA-218ENST00000540430 CABP2Q9NPB3 220 aa11.92□□□□□ -0.5
LDHA-218ENST00000540430 RGPD1P0DJD0 1748 aa11.91□□□□□ -0.5
LDHA-218ENST00000540430 STRN4Q9NRL3 753 aa11.91□□□□□ -0.5
LDHA-218ENST00000540430 ISY1Q9ULR0 285 aaKnown RBP11.91□□□□□ -0.5
LDHA-218ENST00000540430 RBM10P98175 930 aaKnown RBP11.91□□□□□ -0.5
LDHA-218ENST00000540430 MAPK8IP3Q9UPT6 1336 aa11.9□□□□□ -0.5
LDHA-218ENST00000540430 FGD1P98174 961 aa11.9□□□□□ -0.5
LDHA-218ENST00000540430 DUSP27Q5VZP5 1158 aa11.9□□□□□ -0.5
LDHA-218ENST00000540430 SSH2Q76I76 1423 aa11.9□□□□□ -0.5
LDHA-218ENST00000540430 TRPM1Q7Z4N2 1603 aa11.9□□□□□ -0.5
LDHA-218ENST00000540430 EVA1CP58658 441 aa11.89□□□□□ -0.51
LDHA-218ENST00000540430 FAM182BQ5T319 152 aa11.89□□□□□ -0.51
LDHA-218ENST00000540430 LMO7Q8WWI1 1683 aa11.89□□□□□ -0.51
LDHA-218ENST00000540430 CAMTA1Q9Y6Y1 1673 aa11.89□□□□□ -0.51
LDHA-218ENST00000540430 GCP02774 474 aa11.89□□□□□ -0.51
LDHA-218ENST00000540430 BARGINQ6ZT62 677 aa11.89□□□□□ -0.51
LDHA-218ENST00000540430 CABP1Q9NZU7 370 aa11.89□□□□□ -0.51
LDHA-218ENST00000540430 DISP2A7MBM2 1401 aa11.89□□□□□ -0.51
LDHA-218ENST00000540430 USP6P35125 1406 aa11.88□□□□□ -0.51
LDHA-218ENST00000540430 EVC2Q86UK5 1308 aa11.88□□□□□ -0.51
LDHA-218ENST00000540430 ZNF521Q96K83 1311 aa11.88□□□□□ -0.51
LDHA-218ENST00000540430 RGS3P49796 1198 aa11.88□□□□□ -0.51
LDHA-218ENST00000540430 MRE11P49959 708 aa11.88□□□□□ -0.51
LDHA-218ENST00000540430 FAM196AQ6ZSG2 479 aa11.88□□□□□ -0.51
LDHA-218ENST00000540430 TNS1Q9HBL0 1735 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms