RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 SLIT1O75093 1534 aa14.72□□□□□ -0.05
C11orf54-214ENST00000540113 ITPRIPQ8IWB1 547 aa14.72□□□□□ -0.05
C11orf54-214ENST00000540113 IL13P35225 146 aa14.71□□□□□ -0.06
C11orf54-214ENST00000540113 CT47B1P0C2W7 299 aaPredicted RBP14.7□□□□□ -0.06
C11orf54-214ENST00000540113 RWDD1Q9H446 243 aaPredicted RBP14.7□□□□□ -0.06
C11orf54-214ENST00000540113 SLC26A8Q96RN1 970 aa14.7□□□□□ -0.06
C11orf54-214ENST00000540113 PNNQ9H307 717 aaKnown RBP14.7□□□□□ -0.06
C11orf54-214ENST00000540113 NUTM2FA1L443 756 aa14.69□□□□□ -0.06
C11orf54-214ENST00000540113 RRS1Q15050 365 aaKnown RBP14.69□□□□□ -0.06
C11orf54-214ENST00000540113 TMEM57Q8N5G2 664 aa14.69□□□□□ -0.06
C11orf54-214ENST00000540113 VIRMAQ69YN4 1812 aaKnown RBP14.69□□□□□ -0.06
C11orf54-214ENST00000540113 COG3Q96JB2 828 aa14.68□□□□□ -0.06
C11orf54-214ENST00000540113 ELL2O00472 640 aaPredicted RBP14.68□□□□□ -0.06
C11orf54-214ENST00000540113 NFKBIBQ15653 356 aa14.68□□□□□ -0.06
C11orf54-214ENST00000540113 ATF7IPQ6VMQ6 1270 aa14.68□□□□□ -0.06
C11orf54-214ENST00000540113 DLG5Q8TDM6 1919 aa14.68□□□□□ -0.06
C11orf54-214ENST00000540113 NALCNQ8IZF0 1738 aa14.67□□□□□ -0.06
C11orf54-214ENST00000540113 NFE2L2Q16236 605 aa14.66□□□□□ -0.06
C11orf54-214ENST00000540113 THEMISQ8N1K5 641 aaPredicted RBP14.66□□□□□ -0.06
C11orf54-214ENST00000540113 ZNF692Q9BU19 519 aaPredicted RBP14.66□□□□□ -0.06
C11orf54-214ENST00000540113 ADAMTSL3P82987 1691 aa14.66□□□□□ -0.06
C11orf54-214ENST00000540113 OVOS2A0A0J9YW53 1432 aa14.66□□□□□ -0.06
C11orf54-214ENST00000540113 OVOS2Q6IE36 1432 aa14.66□□□□□ -0.06
C11orf54-214ENST00000540113 ACEP12821 1306 aa14.66□□□□□ -0.06
C11orf54-214ENST00000540113 TTC21BQ7Z4L5 1316 aa14.66□□□□□ -0.06
C11orf54-214ENST00000540113 PEAK1Q9H792 1746 aa14.65□□□□□ -0.06
C11orf54-214ENST00000540113 AAMPQ13685 434 aa14.65□□□□□ -0.06
C11orf54-214ENST00000540113 EID1Q9Y6B2 187 aa14.65□□□□□ -0.06
C11orf54-214ENST00000540113 USP6P35125 1406 aa14.65□□□□□ -0.06
C11orf54-214ENST00000540113 PLEKHG3A1L390 1219 aa14.65□□□□□ -0.06
C11orf54-214ENST00000540113 PRKCSHP14314 528 aaPredicted RBP14.65□□□□□ -0.06
C11orf54-214ENST00000540113 TSPYL6Q8N831 410 aa14.65□□□□□ -0.06
C11orf54-214ENST00000540113 XRN1Q8IZH2 1706 aaKnown RBP14.64□□□□□ -0.07
C11orf54-214ENST00000540113 PTCH1Q13635 1447 aa14.64□□□□□ -0.07
C11orf54-214ENST00000540113 RGPD8O14715 1765 aaPredicted RBP14.64□□□□□ -0.07
C11orf54-214ENST00000540113 FAM83GA6ND36 823 aa14.64□□□□□ -0.07
C11orf54-214ENST00000540113 AMOTL2Q9Y2J4 779 aa14.64□□□□□ -0.07
C11orf54-214ENST00000540113 SSH2Q76I76 1423 aa14.64□□□□□ -0.07
C11orf54-214ENST00000540113 DIP2AQ14689 1571 aa14.63□□□□□ -0.07
C11orf54-214ENST00000540113 DCTN1Q14203 1278 aa14.63□□□□□ -0.07
C11orf54-214ENST00000540113 DDX19BQ9UMR2 479 aa14.63□□□□□ -0.07
C11orf54-214ENST00000540113 RIMS1Q86UR5 1692 aaKnown RBP14.63□□□□□ -0.07
C11orf54-214ENST00000540113 USP35Q9P2H5 1018 aa14.63□□□□□ -0.07
C11orf54-214ENST00000540113 FRAT2O75474 233 aaPredicted RBP14.62□□□□□ -0.07
C11orf54-214ENST00000540113 TBX22Q9Y458 520 aa14.62□□□□□ -0.07
C11orf54-214ENST00000540113 SOX12O15370 315 aa14.62□□□□□ -0.07
C11orf54-214ENST00000540113 C1orf115Q9H7X2 142 aa14.61□□□□□ -0.07
C11orf54-214ENST00000540113 RGPD1P0DJD0 1748 aa14.61□□□□□ -0.07
C11orf54-214ENST00000540113 SLKQ9H2G2 1235 aaPredicted RBP14.61□□□□□ -0.07
C11orf54-214ENST00000540113 ZBTB40Q9NUA8 1239 aa14.61□□□□□ -0.07
C11orf54-214ENST00000540113 MBIPQ9NS73 344 aa14.6□□□□□ -0.07
C11orf54-214ENST00000540113 VAMP4O75379 141 aa14.6□□□□□ -0.07
C11orf54-214ENST00000540113 ZNF853P0CG23 659 aa14.6□□□□□ -0.07
C11orf54-214ENST00000540113 EIF4A2Q14240 407 aaKnown RBP14.6□□□□□ -0.07
C11orf54-214ENST00000540113 CEP170BQ9Y4F5 1589 aaPredicted RBP14.59□□□□□ -0.07
C11orf54-214ENST00000540113 USP31Q70CQ4 1352 aa14.59□□□□□ -0.07
C11orf54-214ENST00000540113 KIF16BQ96L93 1317 aa14.59□□□□□ -0.07
C11orf54-214ENST00000540113 AEBP1Q8IUX7 1158 aa14.59□□□□□ -0.07
C11orf54-214ENST00000540113 IPO8O15397 1037 aaKnown RBP14.58□□□□□ -0.07
C11orf54-214ENST00000540113 HDAC1Q13547 482 aaPredicted RBP14.58□□□□□ -0.07
C11orf54-214ENST00000540113 ALDH1L2Q3SY69 923 aa14.58□□□□□ -0.07
C11orf54-214ENST00000540113 SPRYD3Q8NCJ5 442 aa14.58□□□□□ -0.07
C11orf54-214ENST00000540113 FMN2Q9NZ56 1722 aa14.58□□□□□ -0.07
C11orf54-214ENST00000540113 MFAP1P55081 439 aaKnown RBP14.58□□□□□ -0.08
C11orf54-214ENST00000540113 C8orf58Q8NAV2 365 aa14.58□□□□□ -0.08
C11orf54-214ENST00000540113 PIK3C2AO00443 1686 aa14.58□□□□□ -0.08
C11orf54-214ENST00000540113 MRPL50Q8N5N7 158 aaKnown RBP14.57□□□□□ -0.08
C11orf54-214ENST00000540113 LNPKQ9C0E8 428 aa14.57□□□□□ -0.08
C11orf54-214ENST00000540113 IFT57Q9NWB7 429 aa14.57□□□□□ -0.08
C11orf54-214ENST00000540113 TBC1D32Q96NH3 1257 aa14.57□□□□□ -0.08
C11orf54-214ENST00000540113 UPF2Q9HAU5 1272 aaKnown RBP14.56□□□□□ -0.08
C11orf54-214ENST00000540113 GNAI1P63096 354 aa14.56□□□□□ -0.08
C11orf54-214ENST00000540113 CALD1Q05682 793 aaKnown RBP14.56□□□□□ -0.08
C11orf54-214ENST00000540113 MARF1Q9Y4F3 1742 aaKnown RBP14.55□□□□□ -0.08
C11orf54-214ENST00000540113 KRT24Q2M2I5 525 aa14.55□□□□□ -0.08
C11orf54-214ENST00000540113 HSP90AB2PQ58FF8 381 aa14.55□□□□□ -0.08
C11orf54-214ENST00000540113 SMC5Q8IY18 1101 aa14.55□□□□□ -0.08
C11orf54-214ENST00000540113 BRPF1P55201 1214 aaPredicted RBP14.55□□□□□ -0.08
C11orf54-214ENST00000540113 TWISTNBQ3B726 338 aaPredicted RBP14.55□□□□□ -0.08
C11orf54-214ENST00000540113 SULT6B1Q6IMI4 303 aa14.55□□□□□ -0.08
C11orf54-214ENST00000540113 TTC21AQ8NDW8 1320 aa14.54□□□□□ -0.08
C11orf54-214ENST00000540113 ZNF142P52746 1687 aaPredicted RBP14.54□□□□□ -0.08
C11orf54-214ENST00000540113 ZBTB7BO15156 539 aaPredicted RBP14.54□□□□□ -0.08
C11orf54-214ENST00000540113 KCNA6P17658 529 aa14.54□□□□□ -0.08
C11orf54-214ENST00000540113 LMOD3Q0VAK6 560 aa14.54□□□□□ -0.08
C11orf54-214ENST00000540113 ZNF428Q96B54 188 aa14.54□□□□□ -0.08
C11orf54-214ENST00000540113 CFAP44Q96MT7 982 aa14.54□□□□□ -0.08
C11orf54-214ENST00000540113 TBC1D2Q9BYX2 928 aa14.54□□□□□ -0.08
C11orf54-214ENST00000540113 BECN1Q14457 450 aa14.53□□□□□ -0.08
C11orf54-214ENST00000540113 GSE1Q14687 1217 aa14.53□□□□□ -0.08
C11orf54-214ENST00000540113 MAP3K19Q56UN5 1328 aa14.53□□□□□ -0.08
C11orf54-214ENST00000540113 MCM10Q7L590 875 aa14.52□□□□□ -0.08
C11orf54-214ENST00000540113 PIK3R4Q99570 1358 aa14.52□□□□□ -0.09
C11orf54-214ENST00000540113 ANKARQ7Z5J8 1434 aa14.52□□□□□ -0.09
C11orf54-214ENST00000540113 NUCB1Q02818 461 aa14.52□□□□□ -0.09
C11orf54-214ENST00000540113 ANKRD45Q5TZF3 282 aa14.52□□□□□ -0.09
C11orf54-214ENST00000540113 ANKLE2Q86XL3 938 aa14.52□□□□□ -0.09
C11orf54-214ENST00000540113 IL27Q8NEV9 243 aa14.52□□□□□ -0.09
C11orf54-214ENST00000540113 C22orf23Q9BZE7 217 aa14.52□□□□□ -0.09
C11orf54-214ENST00000540113 NGDNQ8NEJ9 315 aaKnown RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms