RNA–Protein interactions for RNA: ENST00000540013.5

MRE11-209, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 1 (best) BASIC

Gene MRE11, Length 1,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-209ENST00000540013 C4orf48Q5BLP8 95 aa9.87□□□□□ -0.83
MRE11-209ENST00000540013 ARID3AQ99856 593 aa9.87□□□□□ -0.83
MRE11-209ENST00000540013 FNBP4Q8N3X1 1017 aaPredicted RBP9.86□□□□□ -0.83
MRE11-209ENST00000540013 TRIM52Q96A61 297 aa9.86□□□□□ -0.83
MRE11-209ENST00000540013 OCSTAMPQ9BR26 566 aa9.86□□□□□ -0.83
MRE11-209ENST00000540013 PDZRN3Q9UPQ7 1066 aa9.86□□□□□ -0.83
MRE11-209ENST00000540013 NACADO15069 1562 aa9.85□□□□□ -0.83
MRE11-209ENST00000540013 TTC24A2A3L6 582 aaPredicted RBP9.85□□□□□ -0.83
MRE11-209ENST00000540013 SIAH2O43255 324 aa9.85□□□□□ -0.83
MRE11-209ENST00000540013 VAC14Q08AM6 782 aa9.85□□□□□ -0.83
MRE11-209ENST00000540013 CCDC125Q86Z20 511 aa9.85□□□□□ -0.83
MRE11-209ENST00000540013 CDK15Q96Q40 435 aa9.85□□□□□ -0.83
MRE11-209ENST00000540013 PCDHB9Q9Y5E1 797 aa9.85□□□□□ -0.83
MRE11-209ENST00000540013 TNFRSF10AO00220 468 aa9.84□□□□□ -0.83
MRE11-209ENST00000540013 TRAK2O60296 914 aa9.84□□□□□ -0.83
MRE11-209ENST00000540013 PDIA4P13667 645 aaKnown RBP9.84□□□□□ -0.83
MRE11-209ENST00000540013 SEMA3FQ13275 785 aa9.84□□□□□ -0.83
MRE11-209ENST00000540013 VASH1Q7L8A9 365 aaPredicted RBP9.83□□□□□ -0.84
MRE11-209ENST00000540013 C1orf115Q9H7X2 142 aa9.83□□□□□ -0.84
MRE11-209ENST00000540013 ADH1CP00326 375 aa9.82□□□□□ -0.84
MRE11-209ENST00000540013 NR5A1Q13285 461 aa9.82□□□□□ -0.84
MRE11-209ENST00000540013 ARID5BQ14865 1188 aa9.82□□□□□ -0.84
MRE11-209ENST00000540013 TRIM67Q6ZTA4 783 aa9.82□□□□□ -0.84
MRE11-209ENST00000540013 SEPT12Q8IYM1 358 aa9.82□□□□□ -0.84
MRE11-209ENST00000540013 TOR4AQ9NXH8 423 aa9.82□□□□□ -0.84
MRE11-209ENST00000540013 WASF2Q9Y6W5 498 aa9.82□□□□□ -0.84
MRE11-209ENST00000540013 ALDH1A1P00352 501 aa9.81□□□□□ -0.84
MRE11-209ENST00000540013 RNF20Q5VTR2 975 aa9.81□□□□□ -0.84
MRE11-209ENST00000540013 TLL2Q9Y6L7 1015 aa9.8□□□□□ -0.84
MRE11-209ENST00000540013 KCTD15Q96SI1 283 aaPredicted RBP9.79□□□□□ -0.84
MRE11-209ENST00000540013 DHX9Q08211 1270 aaKnown RBP9.78□□□□□ -0.84
MRE11-209ENST00000540013 FSHRP23945 695 aa9.77□□□□□ -0.85
MRE11-209ENST00000540013 ALG2Q9H553 416 aa9.77□□□□□ -0.85
MRE11-209ENST00000540013 SLFNL1Q499Z3 407 aa9.76□□□□□ -0.85
MRE11-209ENST00000540013 CEP126Q9P2H0 1117 aa9.76□□□□□ -0.85
MRE11-209ENST00000540013 TTBK1Q5TCY1 1321 aaPredicted RBP9.76□□□□□ -0.85
MRE11-209ENST00000540013 ESPNB1AK53 854 aa9.75□□□□□ -0.85
MRE11-209ENST00000540013 GRM5P41594 1212 aa9.75□□□□□ -0.85
MRE11-209ENST00000540013 MYT1Q01538 1121 aa9.75□□□□□ -0.85
MRE11-209ENST00000540013 GLMNQ92990 594 aa9.75□□□□□ -0.85
MRE11-209ENST00000540013 CALR3Q96L12 384 aaKnown RBP9.75□□□□□ -0.85
MRE11-209ENST00000540013 MYO15BQ96JP2 1530 aa9.74□□□□□ -0.85
MRE11-209ENST00000540013 FAM187AA6NFU0 413 aa9.74□□□□□ -0.85
MRE11-209ENST00000540013 POM121CA8CG34 1229 aa9.74□□□□□ -0.85
MRE11-209ENST00000540013 DGAT1O75907 488 aa9.74□□□□□ -0.85
MRE11-209ENST00000540013 SMPD1P17405 629 aa9.74□□□□□ -0.85
MRE11-209ENST00000540013 NNTQ13423 1086 aa9.74□□□□□ -0.85
MRE11-209ENST00000540013 PKDCCQ504Y2 493 aa9.74□□□□□ -0.85
MRE11-209ENST00000540013 HDGFL1Q5TGJ6 251 aa9.74□□□□□ -0.85
MRE11-209ENST00000540013 CCDC116Q8IYX3 515 aa9.74□□□□□ -0.85
MRE11-209ENST00000540013 EMILIN1Q9Y6C2 1016 aa9.74□□□□□ -0.85
MRE11-209ENST00000540013 J3QL48 77 aa9.73□□□□□ -0.85
MRE11-209ENST00000540013 NFATC2IPQ8NCF5 419 aa9.73□□□□□ -0.85
MRE11-209ENST00000540013 PGPEP1Q9NXJ5 209 aa9.73□□□□□ -0.85
MRE11-209ENST00000540013 INTS6LQ5JSJ4 861 aaKnown RBP9.72□□□□□ -0.85
MRE11-209ENST00000540013 RNF135Q8IUD6 432 aa9.72□□□□□ -0.85
MRE11-209ENST00000540013 ZNF777Q9ULD5 760 aaPredicted RBP9.72□□□□□ -0.85
MRE11-209ENST00000540013 UNC13AQ9UPW8 1703 aa9.71□□□□□ -0.85
MRE11-209ENST00000540013 GIGYF1O75420 1035 aaPredicted RBP9.71□□□□□ -0.86
MRE11-209ENST00000540013 CTC1Q2NKJ3 1217 aa9.7□□□□□ -0.86
MRE11-209ENST00000540013 MAP7D1Q3KQU3 841 aa9.7□□□□□ -0.86
MRE11-209ENST00000540013 ZCCHC6Q5VYS8 1495 aaKnown RBP9.7□□□□□ -0.86
MRE11-209ENST00000540013 LZTS3O60299 673 aaPredicted RBP9.69□□□□□ -0.86
MRE11-209ENST00000540013 AVPP01185 164 aa9.69□□□□□ -0.86
MRE11-209ENST00000540013 ESF1Q9H501 851 aaKnown RBP9.69□□□□□ -0.86
MRE11-209ENST00000540013 NR3C2P08235 984 aa9.68□□□□□ -0.86
MRE11-209ENST00000540013 RAB15P59190 212 aa9.68□□□□□ -0.86
MRE11-209ENST00000540013 PPP1R26Q5T8A7 1209 aaPredicted RBP9.68□□□□□ -0.86
MRE11-209ENST00000540013 ADAMTS19Q8TE59 1207 aa9.68□□□□□ -0.86
MRE11-209ENST00000540013 SIRT1Q96EB6 747 aa9.68□□□□□ -0.86
MRE11-209ENST00000540013 LOC105371045A0A1W2PR82 267 aa9.67□□□□□ -0.86
MRE11-209ENST00000540013 ARID3CA6NKF2 412 aa9.67□□□□□ -0.86
MRE11-209ENST00000540013 ERVH48-1M5A8F1 160 aa9.67□□□□□ -0.86
MRE11-209ENST00000540013 PHTF2Q8N3S3 785 aa9.67□□□□□ -0.86
MRE11-209ENST00000540013 CCDC97Q96F63 343 aaPredicted RBP9.67□□□□□ -0.86
MRE11-209ENST00000540013 DOLKQ9UPQ8 538 aa9.67□□□□□ -0.86
MRE11-209ENST00000540013 WDR4P57081 412 aaKnown RBP9.66□□□□□ -0.86
MRE11-209ENST00000540013 HPS1Q92902 700 aa9.66□□□□□ -0.86
MRE11-209ENST00000540013 SERPINA10Q9UK55 444 aa9.66□□□□□ -0.86
MRE11-209ENST00000540013 CHIC2Q9UKJ5 165 aa9.66□□□□□ -0.86
MRE11-209ENST00000540013 PCDHB11Q9Y5F2 797 aa9.66□□□□□ -0.86
MRE11-209ENST00000540013 DCAF1Q9Y4B6 1507 aa9.66□□□□□ -0.86
MRE11-209ENST00000540013 ZIC2O95409 532 aaPredicted RBP9.65□□□□□ -0.86
MRE11-209ENST00000540013 MYCP01106 439 aaPredicted RBP9.65□□□□□ -0.86
MRE11-209ENST00000540013 SMCPP49901 116 aaPredicted RBP9.65□□□□□ -0.86
MRE11-209ENST00000540013 CRIPAKQ8N1N5 446 aa9.65□□□□□ -0.86
MRE11-209ENST00000540013 PLPP7Q8NBV4 271 aa9.65□□□□□ -0.86
MRE11-209ENST00000540013 LOC100996750A0A140TA64 210 aa9.64□□□□□ -0.87
MRE11-209ENST00000540013 SKIP12755 728 aa9.64□□□□□ -0.87
MRE11-209ENST00000540013 USP4Q13107 963 aa9.64□□□□□ -0.87
MRE11-209ENST00000540013 KRTAP4-6Q9BYQ5 205 aa9.64□□□□□ -0.87
MRE11-209ENST00000540013 CAPN5O15484 640 aaPredicted RBP9.63□□□□□ -0.87
MRE11-209ENST00000540013 ATP9BO43861 1147 aa9.63□□□□□ -0.87
MRE11-209ENST00000540013 TIMP2P16035 220 aa9.63□□□□□ -0.87
MRE11-209ENST00000540013 CC2D2BQ6DHV5 1058 aa9.63□□□□□ -0.87
MRE11-209ENST00000540013 TREML4Q6UXN2 200 aa9.63□□□□□ -0.87
MRE11-209ENST00000540013 KCTD17Q8N5Z5 321 aa9.63□□□□□ -0.87
MRE11-209ENST00000540013 KLF16Q9BXK1 252 aaPredicted RBP9.63□□□□□ -0.87
MRE11-209ENST00000540013 POTECB2RU33 542 aa9.62□□□□□ -0.87
MRE11-209ENST00000540013 AXIN1O15169 862 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms