RNA–Protein interactions for RNA: ENST00000538923.1

MRE11-208, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 5

Gene MRE11, Length 558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-208ENST00000538923 GLI3P10071 1580 aa13.12□□□□□ -0.31
MRE11-208ENST00000538923 SAFB2Q14151 953 aaKnown RBP eCLIP13.12□□□□□ -0.31
MRE11-208ENST00000538923 LMOD2Q6P5Q4 547 aa13.12□□□□□ -0.31
MRE11-208ENST00000538923 POGKQ9P215 609 aa13.12□□□□□ -0.31
MRE11-208ENST00000538923 ANKARQ7Z5J8 1434 aa13.12□□□□□ -0.31
MRE11-208ENST00000538923 SF3B2Q13435 895 aaKnown RBP13.11□□□□□ -0.31
MRE11-208ENST00000538923 SEPT12Q8IYM1 358 aa13.11□□□□□ -0.31
MRE11-208ENST00000538923 CABLES1Q8TDN4 633 aa13.11□□□□□ -0.31
MRE11-208ENST00000538923 RYDENQ9NUL5 291 aaKnown RBP13.11□□□□□ -0.31
MRE11-208ENST00000538923 DLC1Q96QB1 1528 aa13.1□□□□□ -0.31
MRE11-208ENST00000538923 ONECUT3O60422 494 aaPredicted RBP13.1□□□□□ -0.31
MRE11-208ENST00000538923 COLQQ9Y215 455 aaPredicted RBP13.1□□□□□ -0.31
MRE11-208ENST00000538923 CCDC9Q9Y3X0 531 aaKnown RBP13.1□□□□□ -0.31
MRE11-208ENST00000538923 FBXO22Q8NEZ5 403 aa13.09□□□□□ -0.31
MRE11-208ENST00000538923 PMFBP1Q8TBY8 1022 aa13.09□□□□□ -0.31
MRE11-208ENST00000538923 EIF3AQ14152 1382 aaKnown RBP13.08□□□□□ -0.31
MRE11-208ENST00000538923 FAM83GA6ND36 823 aa13.08□□□□□ -0.32
MRE11-208ENST00000538923 KRT27Q7Z3Y8 459 aa13.08□□□□□ -0.32
MRE11-208ENST00000538923 GPRASP1Q5JY77 1395 aa13.07□□□□□ -0.32
MRE11-208ENST00000538923 PAXIP1Q6ZW49 1069 aaPredicted RBP13.07□□□□□ -0.32
MRE11-208ENST00000538923 PDCD7Q8N8D1 485 aaKnown RBP13.07□□□□□ -0.32
MRE11-208ENST00000538923 SPRYD3Q8NCJ5 442 aa13.07□□□□□ -0.32
MRE11-208ENST00000538923 CFAP44Q96MT7 982 aa13.07□□□□□ -0.32
MRE11-208ENST00000538923 TRAK1Q9UPV9 953 aa13.07□□□□□ -0.32
MRE11-208ENST00000538923 ADGRB2O60241 1585 aa13.07□□□□□ -0.32
MRE11-208ENST00000538923 POTEFA5A3E0 1075 aa13.06□□□□□ -0.32
MRE11-208ENST00000538923 DEFB132Q7Z7B7 95 aa13.06□□□□□ -0.32
MRE11-208ENST00000538923 MS4A4AQ96JQ5 239 aa13.06□□□□□ -0.32
MRE11-208ENST00000538923 HIRIP3Q9BW71 556 aaPredicted RBP13.06□□□□□ -0.32
MRE11-208ENST00000538923 ADGRB1O14514 1584 aa13.06□□□□□ -0.32
MRE11-208ENST00000538923 RAB3GAP2Q9H2M9 1393 aa13.06□□□□□ -0.32
MRE11-208ENST00000538923 NWD2Q9ULI1 1742 aa13.05□□□□□ -0.32
MRE11-208ENST00000538923 A0A0G2JS52 829 aa13.05□□□□□ -0.32
MRE11-208ENST00000538923 GTPBP6O43824 516 aaPredicted RBP13.05□□□□□ -0.32
MRE11-208ENST00000538923 MYT1Q01538 1121 aa13.05□□□□□ -0.32
MRE11-208ENST00000538923 STAC3Q96MF2 364 aa13.05□□□□□ -0.32
MRE11-208ENST00000538923 PLCH1Q4KWH8 1693 aa13.05□□□□□ -0.32
MRE11-208ENST00000538923 DCAF11Q8TEB1 546 aa13.04□□□□□ -0.32
MRE11-208ENST00000538923 BTG4Q9NY30 223 aa13.04□□□□□ -0.32
MRE11-208ENST00000538923 MINK1Q8N4C8 1332 aaPredicted RBP13.04□□□□□ -0.32
MRE11-208ENST00000538923 TULP4Q9NRJ4 1543 aa13.03□□□□□ -0.32
MRE11-208ENST00000538923 WASLO00401 505 aaPredicted RBP13.03□□□□□ -0.32
MRE11-208ENST00000538923 FAM98CQ17RN3 349 aaKnown RBP13.03□□□□□ -0.32
MRE11-208ENST00000538923 ABCA3Q99758 1704 aa13.02□□□□□ -0.32
MRE11-208ENST00000538923 BAG6P46379 1132 aa13.02□□□□□ -0.33
MRE11-208ENST00000538923 DPY19L2Q6NUT2 758 aa13.02□□□□□ -0.33
MRE11-208ENST00000538923 NGDNQ8NEJ9 315 aaKnown RBP13.02□□□□□ -0.33
MRE11-208ENST00000538923 KDM2AQ9Y2K7 1162 aa13.02□□□□□ -0.33
MRE11-208ENST00000538923 PRR36Q9H6K5 1346 aa13.02□□□□□ -0.33
MRE11-208ENST00000538923 RGPD8O14715 1765 aaPredicted RBP13.01□□□□□ -0.33
MRE11-208ENST00000538923 COL14A1Q05707 1796 aaKnown RBP12.99□□□□□ -0.33
MRE11-208ENST00000538923 TRPM3Q9HCF6 1732 aaPredicted RBP12.99□□□□□ -0.33
MRE11-208ENST00000538923 SPATA31A5Q5VU36 1347 aa12.99□□□□□ -0.33
MRE11-208ENST00000538923 SPATA31A7Q8IWB4 1347 aa12.99□□□□□ -0.33
MRE11-208ENST00000538923 G3V3G9 751 aa12.99□□□□□ -0.33
MRE11-208ENST00000538923 PRDM11Q9NQV5 511 aa12.99□□□□□ -0.33
MRE11-208ENST00000538923 BRWD3Q6RI45 1802 aa12.99□□□□□ -0.33
MRE11-208ENST00000538923 ALS2Q96Q42 1657 aa12.99□□□□□ -0.33
MRE11-208ENST00000538923 NRAPQ86VF7 1730 aa12.98□□□□□ -0.33
MRE11-208ENST00000538923 PPP1R37O75864 691 aa12.97□□□□□ -0.33
MRE11-208ENST00000538923 PLCB2Q00722 1185 aa12.97□□□□□ -0.33
MRE11-208ENST00000538923 L3MBTL3Q96JM7 780 aaPredicted RBP12.97□□□□□ -0.33
MRE11-208ENST00000538923 HRCP23327 699 aa12.96□□□□□ -0.33
MRE11-208ENST00000538923 NUDT16Q96DE0 195 aaKnown RBP12.96□□□□□ -0.33
MRE11-208ENST00000538923 ATP7BP35670 1465 aa12.96□□□□□ -0.34
MRE11-208ENST00000538923 KIAA0232Q92628 1395 aa12.95□□□□□ -0.34
MRE11-208ENST00000538923 PSDA5PKW4 1024 aaPredicted RBP12.95□□□□□ -0.34
MRE11-208ENST00000538923 FAM182BQ5T319 152 aa12.95□□□□□ -0.34
MRE11-208ENST00000538923 BOLA1Q9Y3E2 137 aa12.95□□□□□ -0.34
MRE11-208ENST00000538923 LRP5O75197 1615 aa12.95□□□□□ -0.34
MRE11-208ENST00000538923 SPATA31A1Q5TZJ5 1347 aa12.94□□□□□ -0.34
MRE11-208ENST00000538923 EN1Q05925 392 aaPredicted RBP12.94□□□□□ -0.34
MRE11-208ENST00000538923 CDK19Q9BWU1 502 aa12.94□□□□□ -0.34
MRE11-208ENST00000538923 DISP2A7MBM2 1401 aa12.94□□□□□ -0.34
MRE11-208ENST00000538923 CHRNA2Q15822 529 aa12.93□□□□□ -0.34
MRE11-208ENST00000538923 LHX8Q68G74 356 aa12.93□□□□□ -0.34
MRE11-208ENST00000538923 STRN4Q9NRL3 753 aa12.93□□□□□ -0.34
MRE11-208ENST00000538923 POLR3AO14802 1390 aaPredicted RBP12.93□□□□□ -0.34
MRE11-208ENST00000538923 THSD7AQ9UPZ6 1657 aa12.93□□□□□ -0.34
MRE11-208ENST00000538923 ZC3H6P61129 1189 aaKnown RBP12.92□□□□□ -0.34
MRE11-208ENST00000538923 FAM196AQ6ZSG2 479 aa12.92□□□□□ -0.34
MRE11-208ENST00000538923 ACEP12821 1306 aa12.91□□□□□ -0.34
MRE11-208ENST00000538923 CRYBG1Q9Y4K1 1723 aa12.91□□□□□ -0.34
MRE11-208ENST00000538923 PLEKHG3A1L390 1219 aa12.91□□□□□ -0.34
MRE11-208ENST00000538923 POTEB2H3BUK9 544 aa12.91□□□□□ -0.34
MRE11-208ENST00000538923 EVA1CP58658 441 aa12.91□□□□□ -0.34
MRE11-208ENST00000538923 NBPF8Q3BBV2 869 aa12.91□□□□□ -0.34
MRE11-208ENST00000538923 NUTM2GQ5VZR2 741 aa12.91□□□□□ -0.34
MRE11-208ENST00000538923 ITSN1Q15811 1721 aa12.91□□□□□ -0.34
MRE11-208ENST00000538923 ARHGEF28Q8N1W1 1705 aaKnown RBP12.91□□□□□ -0.34
MRE11-208ENST00000538923 R3HDM1Q15032 1099 aaKnown RBP12.9□□□□□ -0.34
MRE11-208ENST00000538923 BARGINQ6ZT62 677 aa12.9□□□□□ -0.34
MRE11-208ENST00000538923 MICALL2Q8IY33 904 aa12.9□□□□□ -0.34
MRE11-208ENST00000538923 RGPD1P0DJD0 1748 aa12.9□□□□□ -0.34
MRE11-208ENST00000538923 TRIM37O94972 964 aa12.89□□□□□ -0.35
MRE11-208ENST00000538923 EZH2Q15910 746 aaKnown RBP12.89□□□□□ -0.35
MRE11-208ENST00000538923 ABTB2Q8N961 1025 aa12.89□□□□□ -0.35
MRE11-208ENST00000538923 USP35Q9P2H5 1018 aa12.89□□□□□ -0.35
MRE11-208ENST00000538923 CPDO75976 1380 aa12.89□□□□□ -0.35
MRE11-208ENST00000538923 PARD3Q8TEW0 1356 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms