RNA–Protein interactions for RNA: ENST00000538451.1

LDHA-216, Transcript of lactate dehydrogenase A, humanhuman

TSL 2

Gene LDHA, Length 1,345 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-216ENST00000538451 PXDNQ92626 1479 aa13.45□□□□□ -0.26
LDHA-216ENST00000538451 KIF24Q5T7B8 1368 aa13.45□□□□□ -0.26
LDHA-216ENST00000538451 SPDYE4A6NLX3 237 aa13.44□□□□□ -0.26
LDHA-216ENST00000538451 FBXO3Q9UK99 471 aa13.44□□□□□ -0.26
LDHA-216ENST00000538451 TNS3Q68CZ2 1445 aa13.44□□□□□ -0.26
LDHA-216ENST00000538451 SPATA31A3Q5VYP0 1347 aa13.44□□□□□ -0.26
LDHA-216ENST00000538451 NEFMP07197 916 aa13.43□□□□□ -0.26
LDHA-216ENST00000538451 AMPHP49418 695 aa13.43□□□□□ -0.26
LDHA-216ENST00000538451 POTEAQ6S8J7 498 aa13.43□□□□□ -0.26
LDHA-216ENST00000538451 POLKQ9UBT6 870 aa13.43□□□□□ -0.26
LDHA-216ENST00000538451 INSRP06213 1382 aa13.43□□□□□ -0.26
LDHA-216ENST00000538451 DIAPH1O60610 1272 aaKnown RBP13.42□□□□□ -0.26
LDHA-216ENST00000538451 HAP1P54257 671 aaPredicted RBP13.42□□□□□ -0.26
LDHA-216ENST00000538451 NUTM2GQ5VZR2 741 aa13.42□□□□□ -0.26
LDHA-216ENST00000538451 YTHDC1Q96MU7 727 aaKnown RBP13.42□□□□□ -0.26
LDHA-216ENST00000538451 ZRANB1Q9UGI0 708 aa13.42□□□□□ -0.26
LDHA-216ENST00000538451 PIK3C2AO00443 1686 aa13.42□□□□□ -0.26
LDHA-216ENST00000538451 USP54Q70EL1 1684 aa13.42□□□□□ -0.26
LDHA-216ENST00000538451 SOX12O15370 315 aa13.41□□□□□ -0.26
LDHA-216ENST00000538451 ADAMTS2O95450 1211 aa13.41□□□□□ -0.26
LDHA-216ENST00000538451 CENPBP07199 599 aaPredicted RBP13.41□□□□□ -0.26
LDHA-216ENST00000538451 PLCB2Q00722 1185 aa13.41□□□□□ -0.26
LDHA-216ENST00000538451 CCDC184Q52MB2 194 aa13.41□□□□□ -0.26
LDHA-216ENST00000538451 C8orf37Q96NL8 207 aa13.41□□□□□ -0.26
LDHA-216ENST00000538451 COL22A1Q8NFW1 1626 aaPredicted RBP13.41□□□□□ -0.26
LDHA-216ENST00000538451 GCP02774 474 aa13.4□□□□□ -0.26
LDHA-216ENST00000538451 FLT4P35916 1363 aa13.4□□□□□ -0.26
LDHA-216ENST00000538451 CDK12Q9NYV4 1490 aaPredicted RBP13.4□□□□□ -0.26
LDHA-216ENST00000538451 TRPM3Q9HCF6 1732 aaPredicted RBP13.4□□□□□ -0.26
LDHA-216ENST00000538451 AFF2P51816 1311 aa13.4□□□□□ -0.26
LDHA-216ENST00000538451 SMG6Q86US8 1419 aaKnown RBP13.4□□□□□ -0.26
LDHA-216ENST00000538451 MKRN4PQ13434 485 aaPredicted RBP13.39□□□□□ -0.27
LDHA-216ENST00000538451 RRS1Q15050 365 aaKnown RBP13.39□□□□□ -0.27
LDHA-216ENST00000538451 NGLY1Q96IV0 654 aa13.39□□□□□ -0.27
LDHA-216ENST00000538451 RTL1A6NKG5 1358 aa13.39□□□□□ -0.27
LDHA-216ENST00000538451 MAP2P11137 1827 aaKnown RBP13.39□□□□□ -0.27
LDHA-216ENST00000538451 USP19O94966 1318 aa13.39□□□□□ -0.27
LDHA-216ENST00000538451 U2SURPO15042 1029 aaKnown RBP13.39□□□□□ -0.27
LDHA-216ENST00000538451 ABCB7O75027 752 aa13.39□□□□□ -0.27
LDHA-216ENST00000538451 NGEFQ8N5V2 710 aa13.39□□□□□ -0.27
LDHA-216ENST00000538451 EMILIN1Q9Y6C2 1016 aa13.39□□□□□ -0.27
LDHA-216ENST00000538451 MAP3K19Q56UN5 1328 aa13.38□□□□□ -0.27
LDHA-216ENST00000538451 U2AF1L5P0DN76 240 aaPredicted RBP13.38□□□□□ -0.27
LDHA-216ENST00000538451 HNRNPUQ00839 825 aaKnown RBP eCLIP13.38□□□□□ -0.27
LDHA-216ENST00000538451 U2AF1Q01081 240 aaKnown RBP eCLIP13.38□□□□□ -0.27
LDHA-216ENST00000538451 ALS2Q96Q42 1657 aa13.37□□□□□ -0.27
LDHA-216ENST00000538451 RXRBP28702 533 aa13.37□□□□□ -0.27
LDHA-216ENST00000538451 ADAMTS8Q9UP79 889 aa13.37□□□□□ -0.27
LDHA-216ENST00000538451 SLIT3O75094 1523 aa13.36□□□□□ -0.27
LDHA-216ENST00000538451 IP6K1Q92551 441 aa13.36□□□□□ -0.27
LDHA-216ENST00000538451 ZBTB7CA1YPR0 619 aa13.35□□□□□ -0.27
LDHA-216ENST00000538451 FCHSD2O94868 740 aa13.35□□□□□ -0.27
LDHA-216ENST00000538451 FNBP4Q8N3X1 1017 aaPredicted RBP13.35□□□□□ -0.27
LDHA-216ENST00000538451 USP21Q9UK80 565 aa13.35□□□□□ -0.27
LDHA-216ENST00000538451 MAPK8IP3Q9UPT6 1336 aa13.34□□□□□ -0.27
LDHA-216ENST00000538451 PLEKHG5O94827 1062 aa13.34□□□□□ -0.27
LDHA-216ENST00000538451 FBLN1P23142 703 aa13.34□□□□□ -0.27
LDHA-216ENST00000538451 HOXC9P31274 260 aa13.34□□□□□ -0.27
LDHA-216ENST00000538451 VASPP50552 380 aaPredicted RBP13.34□□□□□ -0.27
LDHA-216ENST00000538451 ARHGEF25Q86VW2 580 aa13.34□□□□□ -0.27
LDHA-216ENST00000538451 RUNDC1Q96C34 613 aa13.34□□□□□ -0.27
LDHA-216ENST00000538451 QTRT2Q9H974 415 aaKnown RBP13.34□□□□□ -0.27
LDHA-216ENST00000538451 BLMP54132 1417 aaPredicted RBP13.34□□□□□ -0.27
LDHA-216ENST00000538451 NFAT5O94916 1531 aa13.32□□□□□ -0.28
LDHA-216ENST00000538451 CPDO75976 1380 aa13.32□□□□□ -0.28
LDHA-216ENST00000538451 IL13P35225 146 aa13.32□□□□□ -0.28
LDHA-216ENST00000538451 ZC3H6P61129 1189 aaKnown RBP13.32□□□□□ -0.28
LDHA-216ENST00000538451 RBM6P78332 1123 aaKnown RBP13.32□□□□□ -0.28
LDHA-216ENST00000538451 HSP90AB2PQ58FF8 381 aa13.32□□□□□ -0.28
LDHA-216ENST00000538451 PROM2Q8N271 834 aa13.32□□□□□ -0.28
LDHA-216ENST00000538451 PRDM11Q9NQV5 511 aa13.32□□□□□ -0.28
LDHA-216ENST00000538451 TRPC5Q9UL62 973 aaPredicted RBP13.32□□□□□ -0.28
LDHA-216ENST00000538451 COL3A1P02461 1466 aaPredicted RBP13.31□□□□□ -0.28
LDHA-216ENST00000538451 EIF4A2Q14240 407 aaKnown RBP13.31□□□□□ -0.28
LDHA-216ENST00000538451 ABCC6O95255 1503 aa13.31□□□□□ -0.28
LDHA-216ENST00000538451 MARF1Q9Y4F3 1742 aaKnown RBP13.3□□□□□ -0.28
LDHA-216ENST00000538451 CABLES1Q8TDN4 633 aa13.3□□□□□ -0.28
LDHA-216ENST00000538451 ZBED9Q6R2W3 1325 aa13.3□□□□□ -0.28
LDHA-216ENST00000538451 PHRF1Q9P1Y6 1649 aaKnown RBP13.3□□□□□ -0.28
LDHA-216ENST00000538451 LTN1O94822 1766 aa13.29□□□□□ -0.28
LDHA-216ENST00000538451 CSB-PGBD3P0DP91 1061 aa13.28□□□□□ -0.28
LDHA-216ENST00000538451 PDE3BQ13370 1112 aa13.28□□□□□ -0.28
LDHA-216ENST00000538451 ATRNO75882 1429 aa13.28□□□□□ -0.28
LDHA-216ENST00000538451 BCL9LQ86UU0 1499 aa13.28□□□□□ -0.28
LDHA-216ENST00000538451 SULT6B1Q6IMI4 303 aa13.27□□□□□ -0.29
LDHA-216ENST00000538451 IFNLR1Q8IU57 520 aaPredicted RBP13.27□□□□□ -0.29
LDHA-216ENST00000538451 UNC5CLQ8IV45 518 aa13.27□□□□□ -0.29
LDHA-216ENST00000538451 LTV1Q96GA3 475 aaPredicted RBP13.27□□□□□ -0.29
LDHA-216ENST00000538451 KIAA0232Q92628 1395 aa13.27□□□□□ -0.29
LDHA-216ENST00000538451 SLIT2O94813 1529 aa13.27□□□□□ -0.29
LDHA-216ENST00000538451 HMOX1P09601 288 aa13.26□□□□□ -0.29
LDHA-216ENST00000538451 EVA1CP58658 441 aa13.26□□□□□ -0.29
LDHA-216ENST00000538451 LMOD3Q0VAK6 560 aa13.26□□□□□ -0.29
LDHA-216ENST00000538451 CCDC146Q8IYE0 955 aa13.26□□□□□ -0.29
LDHA-216ENST00000538451 ANKRD24Q8TF21 1146 aa13.26□□□□□ -0.29
LDHA-216ENST00000538451 ABCA3Q99758 1704 aa13.26□□□□□ -0.29
LDHA-216ENST00000538451 APAF1O14727 1248 aa13.25□□□□□ -0.29
LDHA-216ENST00000538451 PRKAR2BP31323 418 aa13.25□□□□□ -0.29
LDHA-216ENST00000538451 TCP11L2Q8N4U5 519 aa13.25□□□□□ -0.29
LDHA-216ENST00000538451 IGSF1Q8N6C5 1336 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms