RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 SRCIN1Q9C0H9 1055 aa6.48□□□□□ -1.37
LRP6-203ENST00000538239 ATP6V1DQ9Y5K8 247 aa6.48□□□□□ -1.37
LRP6-203ENST00000538239 HSPA2P54652 639 aa6.48□□□□□ -1.37
LRP6-203ENST00000538239 CHRNA2Q15822 529 aa6.48□□□□□ -1.37
LRP6-203ENST00000538239 EXOC5O00471 708 aa6.48□□□□□ -1.37
LRP6-203ENST00000538239 DCTN1Q14203 1278 aa6.48□□□□□ -1.37
LRP6-203ENST00000538239 SMC3Q9UQE7 1217 aa6.48□□□□□ -1.37
LRP6-203ENST00000538239 FKBP4Q02790 459 aaKnown RBP eCLIP6.47□□□□□ -1.37
LRP6-203ENST00000538239 NCKAP5LQ9HCH0 1330 aa6.47□□□□□ -1.37
LRP6-203ENST00000538239 GOLGA6L3A6NEY3 463 aa6.47□□□□□ -1.37
LRP6-203ENST00000538239 C8orf37Q96NL8 207 aa6.47□□□□□ -1.37
LRP6-203ENST00000538239 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.47□□□□□ -1.37
LRP6-203ENST00000538239 BRMS1Q9HCU9 246 aa6.47□□□□□ -1.37
LRP6-203ENST00000538239 NAIPQ13075 1403 aa6.47□□□□□ -1.37
LRP6-203ENST00000538239 TOM1O60784 492 aa6.47□□□□□ -1.37
LRP6-203ENST00000538239 IGHMBP2P38935 993 aaKnown RBP6.47□□□□□ -1.37
LRP6-203ENST00000538239 CCT4P50991 539 aaKnown RBP6.47□□□□□ -1.37
LRP6-203ENST00000538239 SART3Q15020 963 aaKnown RBP6.47□□□□□ -1.37
LRP6-203ENST00000538239 BCAR3O75815 825 aa6.47□□□□□ -1.37
LRP6-203ENST00000538239 TPM3P06753 285 aa6.47□□□□□ -1.37
LRP6-203ENST00000538239 TSR1Q2NL82 804 aaKnown RBP6.47□□□□□ -1.37
LRP6-203ENST00000538239 BICD2Q8TD16 824 aa6.47□□□□□ -1.37
LRP6-203ENST00000538239 THUMPD2Q9BTF0 503 aaKnown RBP6.47□□□□□ -1.37
LRP6-203ENST00000538239 ZNF652Q9Y2D9 606 aa6.47□□□□□ -1.37
LRP6-203ENST00000538239 GOLGA6L19H0YKK7 550 aa6.47□□□□□ -1.37
LRP6-203ENST00000538239 TMEM132AQ24JP5 1023 aa6.47□□□□□ -1.37
LRP6-203ENST00000538239 KDM5BQ9UGL1 1544 aa6.46□□□□□ -1.37
LRP6-203ENST00000538239 CDC45O75419 566 aa6.46□□□□□ -1.37
LRP6-203ENST00000538239 EMILIN1Q9Y6C2 1016 aa6.46□□□□□ -1.37
LRP6-203ENST00000538239 PEG3Q9GZU2 1588 aa6.46□□□□□ -1.37
LRP6-203ENST00000538239 DHX29Q7Z478 1369 aaKnown RBP6.46□□□□□ -1.38
LRP6-203ENST00000538239 A0A0U1RQG5 324 aaPredicted RBP6.46□□□□□ -1.38
LRP6-203ENST00000538239 BECN2A8MW95 431 aa6.46□□□□□ -1.38
LRP6-203ENST00000538239 KRI1Q8N9T8 703 aaKnown RBP6.46□□□□□ -1.38
LRP6-203ENST00000538239 CTTNBP2Q8WZ74 1663 aa6.46□□□□□ -1.38
LRP6-203ENST00000538239 WDR7Q9Y4E6 1490 aa6.46□□□□□ -1.38
LRP6-203ENST00000538239 NFE2L2Q16236 605 aa6.46□□□□□ -1.38
LRP6-203ENST00000538239 RAI14Q9P0K7 980 aa6.46□□□□□ -1.38
LRP6-203ENST00000538239 MYD88Q99836 296 aa6.46□□□□□ -1.38
LRP6-203ENST00000538239 BCL11BQ9C0K0 894 aaPredicted RBP6.46□□□□□ -1.38
LRP6-203ENST00000538239 DDX49Q9Y6V7 483 aaKnown RBP6.46□□□□□ -1.38
LRP6-203ENST00000538239 FCHSD2O94868 740 aa6.46□□□□□ -1.38
LRP6-203ENST00000538239 XBP1P17861 261 aa6.46□□□□□ -1.38
LRP6-203ENST00000538239 CADPS2Q86UW7 1296 aa6.46□□□□□ -1.38
LRP6-203ENST00000538239 AK7Q96M32 723 aa6.46□□□□□ -1.38
LRP6-203ENST00000538239 AACSQ86V21 672 aa6.45□□□□□ -1.38
LRP6-203ENST00000538239 ANKIB1Q9P2G1 1089 aa6.45□□□□□ -1.38
LRP6-203ENST00000538239 DDX11L8A8MPP1 907 aa6.45□□□□□ -1.38
LRP6-203ENST00000538239 PSMA5P28066 241 aa6.45□□□□□ -1.38
LRP6-203ENST00000538239 ACSBG1Q96GR2 724 aa6.45□□□□□ -1.38
LRP6-203ENST00000538239 DEKP35659 375 aaKnown RBP6.45□□□□□ -1.38
LRP6-203ENST00000538239 PAXIP1Q6ZW49 1069 aaPredicted RBP6.45□□□□□ -1.38
LRP6-203ENST00000538239 SYCP2Q9BX26 1530 aa6.45□□□□□ -1.38
LRP6-203ENST00000538239 WDR97A6NE52 1622 aa6.45□□□□□ -1.38
LRP6-203ENST00000538239 ATP2B1P20020 1258 aa6.45□□□□□ -1.38
LRP6-203ENST00000538239 LRRCC1Q9C099 1032 aa6.45□□□□□ -1.38
LRP6-203ENST00000538239 RPGRQ92834 1020 aaKnown RBP6.45□□□□□ -1.38
LRP6-203ENST00000538239 ARID3AQ99856 593 aa6.45□□□□□ -1.38
LRP6-203ENST00000538239 SRGAP3O43295 1099 aa6.44□□□□□ -1.38
LRP6-203ENST00000538239 DUSP27Q5VZP5 1158 aa6.44□□□□□ -1.38
LRP6-203ENST00000538239 HOOK1Q9UJC3 728 aaKnown RBP6.44□□□□□ -1.38
LRP6-203ENST00000538239 ATP10BO94823 1461 aa6.44□□□□□ -1.38
LRP6-203ENST00000538239 MPHOSPH10O00566 681 aaKnown RBP6.44□□□□□ -1.38
LRP6-203ENST00000538239 TPM1P09493 284 aa6.44□□□□□ -1.38
LRP6-203ENST00000538239 TMPOP42166 694 aaKnown RBP6.44□□□□□ -1.38
LRP6-203ENST00000538239 AMOTQ4VCS5 1084 aa6.44□□□□□ -1.38
LRP6-203ENST00000538239 ACEP12821 1306 aa6.44□□□□□ -1.38
LRP6-203ENST00000538239 HIP1O00291 1037 aa6.44□□□□□ -1.38
LRP6-203ENST00000538239 ANKRD24Q8TF21 1146 aa6.44□□□□□ -1.38
LRP6-203ENST00000538239 LRP2BPQ9P2M1 347 aa6.44□□□□□ -1.38
LRP6-203ENST00000538239 ITSN2Q9NZM3 1697 aa6.44□□□□□ -1.38
LRP6-203ENST00000538239 EIF4G3O43432 1585 aaKnown RBP6.44□□□□□ -1.38
LRP6-203ENST00000538239 METTL24Q5JXM2 366 aa6.44□□□□□ -1.38
LRP6-203ENST00000538239 WDR63Q8IWG1 891 aa6.44□□□□□ -1.38
LRP6-203ENST00000538239 NACAP1Q9BZK3 213 aa6.44□□□□□ -1.38
LRP6-203ENST00000538239 PLCH2O75038 1416 aa6.44□□□□□ -1.38
LRP6-203ENST00000538239 GPTP24298 496 aa6.43□□□□□ -1.38
LRP6-203ENST00000538239 C22orf23Q9BZE7 217 aa6.43□□□□□ -1.38
LRP6-203ENST00000538239 CEP126Q9P2H0 1117 aa6.43□□□□□ -1.38
LRP6-203ENST00000538239 HMGB2P26583 209 aaKnown RBP6.43□□□□□ -1.38
LRP6-203ENST00000538239 NUP133Q8WUM0 1156 aa6.43□□□□□ -1.38
LRP6-203ENST00000538239 ABCF2Q9UG63 623 aa6.43□□□□□ -1.38
LRP6-203ENST00000538239 R3HCC1Q9Y3T6 440 aaKnown RBP6.43□□□□□ -1.38
LRP6-203ENST00000538239 A2MP01023 1474 aa6.43□□□□□ -1.38
LRP6-203ENST00000538239 TTLL12Q14166 644 aaPredicted RBP6.43□□□□□ -1.38
LRP6-203ENST00000538239 PDZRN3Q9UPQ7 1066 aa6.43□□□□□ -1.38
LRP6-203ENST00000538239 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.43□□□□□ -1.38
LRP6-203ENST00000538239 LMTK3Q96Q04 1460 aa6.43□□□□□ -1.38
LRP6-203ENST00000538239 TDO2P48775 406 aa6.43□□□□□ -1.38
LRP6-203ENST00000538239 STK3Q13188 491 aa6.43□□□□□ -1.38
LRP6-203ENST00000538239 TAF7Q15545 349 aaPredicted RBP6.43□□□□□ -1.38
LRP6-203ENST00000538239 TRMT112Q9UI30 125 aaKnown RBP6.43□□□□□ -1.38
LRP6-203ENST00000538239 NCOA1Q15788 1441 aa6.43□□□□□ -1.38
LRP6-203ENST00000538239 UHRF1BP1LA0JNW5 1464 aa6.43□□□□□ -1.38
LRP6-203ENST00000538239 CCDC69A6NI79 296 aa6.43□□□□□ -1.38
LRP6-203ENST00000538239 IDH1O75874 414 aaKnown RBP6.43□□□□□ -1.38
LRP6-203ENST00000538239 ADAMTS12P58397 1594 aa6.43□□□□□ -1.38
LRP6-203ENST00000538239 ANKRD20A12PQ8NF67 263 aa6.43□□□□□ -1.38
LRP6-203ENST00000538239 CABLES1Q8TDN4 633 aa6.43□□□□□ -1.38
LRP6-203ENST00000538239 IL1RAPL2Q9NP60 686 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms