RNA–Protein interactions for RNA: ENST00000535479.5

LPCAT3-203, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 2,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-203ENST00000535479 ADGRB3O60242 1522 aa17.27■□□□□ 0.36
LPCAT3-203ENST00000535479 K7ELQ4 463 aaPredicted RBP17.27■□□□□ 0.36
LPCAT3-203ENST00000535479 VWDEQ8N2E2 1590 aa17.27■□□□□ 0.36
LPCAT3-203ENST00000535479 RBM25P49756 843 aaKnown RBP17.26■□□□□ 0.35
LPCAT3-203ENST00000535479 NFE2L2Q16236 605 aa17.26■□□□□ 0.35
LPCAT3-203ENST00000535479 RNF214Q8ND24 703 aa17.26■□□□□ 0.35
LPCAT3-203ENST00000535479 MEIS3Q99687 375 aa17.26■□□□□ 0.35
LPCAT3-203ENST00000535479 DDX11L8A8MPP1 907 aa17.26■□□□□ 0.35
LPCAT3-203ENST00000535479 RBM10P98175 930 aaKnown RBP17.26■□□□□ 0.35
LPCAT3-203ENST00000535479 RAB3GAP1Q15042 981 aa17.25■□□□□ 0.35
LPCAT3-203ENST00000535479 NRXN1Q9ULB1 1477 aa17.25■□□□□ 0.35
LPCAT3-203ENST00000535479 BMP2KLQ5H9B9 411 aa17.25■□□□□ 0.35
LPCAT3-203ENST00000535479 SULT6B1Q6IMI4 303 aa17.25■□□□□ 0.35
LPCAT3-203ENST00000535479 PLEKHM2Q8IWE5 1019 aa17.25■□□□□ 0.35
LPCAT3-203ENST00000535479 NSFL1CQ9UNZ2 370 aaKnown RBP17.25■□□□□ 0.35
LPCAT3-203ENST00000535479 PRPF40AO75400 957 aaKnown RBP17.24■□□□□ 0.35
LPCAT3-203ENST00000535479 MAP4K4O95819 1239 aaPredicted RBP17.24■□□□□ 0.35
LPCAT3-203ENST00000535479 EXOC6BQ9Y2D4 811 aa17.24■□□□□ 0.35
LPCAT3-203ENST00000535479 DDIT3P35638 169 aa17.24■□□□□ 0.35
LPCAT3-203ENST00000535479 NUTM2GQ5VZR2 741 aa17.24■□□□□ 0.35
LPCAT3-203ENST00000535479 GDPD2Q9HCC8 539 aa17.24■□□□□ 0.35
LPCAT3-203ENST00000535479 FCHSD2O94868 740 aa17.23■□□□□ 0.35
LPCAT3-203ENST00000535479 G2E3Q7L622 706 aa17.23■□□□□ 0.35
LPCAT3-203ENST00000535479 VSIG10Q8N0Z9 540 aa17.23■□□□□ 0.35
LPCAT3-203ENST00000535479 GBP4Q96PP9 640 aa17.23■□□□□ 0.35
LPCAT3-203ENST00000535479 YEATS2Q9ULM3 1422 aa17.23■□□□□ 0.35
LPCAT3-203ENST00000535479 BAG4O95429 457 aaKnown RBP17.23■□□□□ 0.35
LPCAT3-203ENST00000535479 LRRC7Q96NW7 1537 aa17.22■□□□□ 0.35
LPCAT3-203ENST00000535479 CD163L1Q9NR16 1453 aa17.22■□□□□ 0.35
LPCAT3-203ENST00000535479 SDSP20132 328 aa17.21■□□□□ 0.35
LPCAT3-203ENST00000535479 UBE2Q2Q8WVN8 375 aa17.21■□□□□ 0.35
LPCAT3-203ENST00000535479 SIGLEC1Q9BZZ2 1709 aa17.21■□□□□ 0.35
LPCAT3-203ENST00000535479 IFT172Q9UG01 1749 aa17.21■□□□□ 0.35
LPCAT3-203ENST00000535479 KIAA1210Q9ULL0 1709 aa17.21■□□□□ 0.35
LPCAT3-203ENST00000535479 COL3A1P02461 1466 aaPredicted RBP17.21■□□□□ 0.35
LPCAT3-203ENST00000535479 CDC45O75419 566 aa17.2■□□□□ 0.34
LPCAT3-203ENST00000535479 NASPP49321 788 aaPredicted RBP17.2■□□□□ 0.34
LPCAT3-203ENST00000535479 CLCN1P35523 988 aa17.2■□□□□ 0.34
LPCAT3-203ENST00000535479 AAMPQ13685 434 aa17.2■□□□□ 0.34
LPCAT3-203ENST00000535479 HSP90AB2PQ58FF8 381 aa17.2■□□□□ 0.34
LPCAT3-203ENST00000535479 FRMPD1Q5SYB0 1578 aa17.2■□□□□ 0.34
LPCAT3-203ENST00000535479 ABCA9Q8IUA7 1624 aa17.19■□□□□ 0.34
LPCAT3-203ENST00000535479 PPLO60437 1756 aa17.19■□□□□ 0.34
LPCAT3-203ENST00000535479 IL13P35225 146 aa17.19■□□□□ 0.34
LPCAT3-203ENST00000535479 YTHDC2Q9H6S0 1430 aaKnown RBP17.19■□□□□ 0.34
LPCAT3-203ENST00000535479 SLC4A2P04920 1241 aa17.18■□□□□ 0.34
LPCAT3-203ENST00000535479 ALDH1L2Q3SY69 923 aa17.18■□□□□ 0.34
LPCAT3-203ENST00000535479 UHRF1BP1LA0JNW5 1464 aa17.18■□□□□ 0.34
LPCAT3-203ENST00000535479 GNAI1P63096 354 aa17.18■□□□□ 0.34
LPCAT3-203ENST00000535479 JARID2Q92833 1246 aaPredicted RBP17.18■□□□□ 0.34
LPCAT3-203ENST00000535479 POGZQ7Z3K3 1410 aa17.18■□□□□ 0.34
LPCAT3-203ENST00000535479 RILPL2Q969X0 211 aa17.17■□□□□ 0.34
LPCAT3-203ENST00000535479 UPF3BQ9BZI7 483 aaKnown RBP17.17■□□□□ 0.34
LPCAT3-203ENST00000535479 CT47B1P0C2W7 299 aaPredicted RBP17.17■□□□□ 0.34
LPCAT3-203ENST00000535479 XPCQ01831 940 aaPredicted RBP17.17■□□□□ 0.34
LPCAT3-203ENST00000535479 HSP90AA2PQ14568 343 aaPredicted RBP17.17■□□□□ 0.34
LPCAT3-203ENST00000535479 DDX54Q8TDD1 881 aaKnown RBP17.17■□□□□ 0.34
LPCAT3-203ENST00000535479 LTV1Q96GA3 475 aaPredicted RBP17.17■□□□□ 0.34
LPCAT3-203ENST00000535479 ARHGEF28Q8N1W1 1705 aaKnown RBP17.17■□□□□ 0.34
LPCAT3-203ENST00000535479 SNX21Q969T3 373 aa17.17■□□□□ 0.34
LPCAT3-203ENST00000535479 GCC1Q96CN9 775 aa17.17■□□□□ 0.34
LPCAT3-203ENST00000535479 RBSNQ9H1K0 784 aa17.17■□□□□ 0.34
LPCAT3-203ENST00000535479 ABCC3O15438 1527 aa17.17■□□□□ 0.34
LPCAT3-203ENST00000535479 ZC3H13Q5T200 1668 aaKnown RBP17.16■□□□□ 0.34
LPCAT3-203ENST00000535479 RPGRIP1LQ68CZ1 1315 aa17.16■□□□□ 0.34
LPCAT3-203ENST00000535479 PRIM1P49642 420 aaKnown RBP17.16■□□□□ 0.34
LPCAT3-203ENST00000535479 CYB5RLQ6IPT4 315 aa17.16■□□□□ 0.34
LPCAT3-203ENST00000535479 ADGRB2O60241 1585 aa17.16■□□□□ 0.34
LPCAT3-203ENST00000535479 MYO3AQ8NEV4 1616 aa17.16■□□□□ 0.34
LPCAT3-203ENST00000535479 MSH6P52701 1360 aa17.16■□□□□ 0.34
LPCAT3-203ENST00000535479 TTC22Q5TAA0 569 aa17.16■□□□□ 0.34
LPCAT3-203ENST00000535479 COG3Q96JB2 828 aa17.16■□□□□ 0.34
LPCAT3-203ENST00000535479 SYCE3A1L190 88 aa17.15■□□□□ 0.34
LPCAT3-203ENST00000535479 MYO5BQ9ULV0 1848 aa17.15■□□□□ 0.34
LPCAT3-203ENST00000535479 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.15■□□□□ 0.34
LPCAT3-203ENST00000535479 TRIM6-TRIM34B2RNG4 842 aa17.14■□□□□ 0.33
LPCAT3-203ENST00000535479 USP26Q9BXU7 913 aa17.14■□□□□ 0.33
LPCAT3-203ENST00000535479 PALD1Q9ULE6 856 aa17.14■□□□□ 0.33
LPCAT3-203ENST00000535479 NEXMIFQ5QGS0 1516 aa17.14■□□□□ 0.33
LPCAT3-203ENST00000535479 NEK4P51957 841 aa17.14■□□□□ 0.33
LPCAT3-203ENST00000535479 NUDT16Q96DE0 195 aaKnown RBP17.14■□□□□ 0.33
LPCAT3-203ENST00000535479 IL1RAPL2Q9NP60 686 aa17.14■□□□□ 0.33
LPCAT3-203ENST00000535479 IL16Q14005 1332 aa17.14■□□□□ 0.33
LPCAT3-203ENST00000535479 NSD2O96028 1365 aa17.14■□□□□ 0.33
LPCAT3-203ENST00000535479 CEP85Q6P2H3 762 aa17.14■□□□□ 0.33
LPCAT3-203ENST00000535479 KIAA1211Q6ZU35 1233 aa17.14■□□□□ 0.33
LPCAT3-203ENST00000535479 GPT2Q8TD30 523 aa17.14■□□□□ 0.33
LPCAT3-203ENST00000535479 CFAP44Q96MT7 982 aa17.14■□□□□ 0.33
LPCAT3-203ENST00000535479 ZSCAN23Q3MJ62 389 aa17.13■□□□□ 0.33
LPCAT3-203ENST00000535479 ABCC4O15439 1325 aa17.13■□□□□ 0.33
LPCAT3-203ENST00000535479 PTPRMP28827 1452 aa17.13■□□□□ 0.33
LPCAT3-203ENST00000535479 IFT57Q9NWB7 429 aa17.13■□□□□ 0.33
LPCAT3-203ENST00000535479 ZDHHC9Q9Y397 364 aa17.13■□□□□ 0.33
LPCAT3-203ENST00000535479 SETBP1Q9Y6X0 1596 aa17.12■□□□□ 0.33
LPCAT3-203ENST00000535479 CALD1Q05682 793 aaKnown RBP17.12■□□□□ 0.33
LPCAT3-203ENST00000535479 EIF4A2Q14240 407 aaKnown RBP17.12■□□□□ 0.33
LPCAT3-203ENST00000535479 R3HCC1Q9Y3T6 440 aaKnown RBP17.12■□□□□ 0.33
LPCAT3-203ENST00000535479 FAM135BQ49AJ0 1406 aa17.12■□□□□ 0.33
LPCAT3-203ENST00000535479 RBM33Q96EV2 1170 aaKnown RBP17.12■□□□□ 0.33
LPCAT3-203ENST00000535479 NCOA3Q9Y6Q9 1424 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms