RNA–Protein interactions for RNA: ENST00000534775.1

PTPMT1-205, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 1,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-205ENST00000534775 AMPHP49418 695 aa31.16■■■□□ 2.58
PTPMT1-205ENST00000534775 KRT28Q7Z3Y7 464 aa31.15■■■□□ 2.58
PTPMT1-205ENST00000534775 RGPD1P0DJD0 1748 aa31.14■■■□□ 2.58
PTPMT1-205ENST00000534775 HSP90AB2PQ58FF8 381 aa31.13■■■□□ 2.57
PTPMT1-205ENST00000534775 KCNH5Q8NCM2 988 aa31.13■■■□□ 2.57
PTPMT1-205ENST00000534775 HMOX1P09601 288 aa31.13■■■□□ 2.57
PTPMT1-205ENST00000534775 RTL1A6NKG5 1358 aa31.12■■■□□ 2.57
PTPMT1-205ENST00000534775 LTN1O94822 1766 aa31.12■■■□□ 2.57
PTPMT1-205ENST00000534775 NFAT5O94916 1531 aa31.11■■■□□ 2.57
PTPMT1-205ENST00000534775 SLIT3O75094 1523 aa31.09■■■□□ 2.57
PTPMT1-205ENST00000534775 ALS2Q96Q42 1657 aa31.09■■■□□ 2.57
PTPMT1-205ENST00000534775 IRX6P78412 446 aaPredicted RBP31.09■■■□□ 2.57
PTPMT1-205ENST00000534775 XPCQ01831 940 aaPredicted RBP31.09■■■□□ 2.57
PTPMT1-205ENST00000534775 SPINK5Q9NQ38 1064 aaPredicted RBP31.09■■■□□ 2.57
PTPMT1-205ENST00000534775 NPHP3Q7Z494 1330 aa31.08■■■□□ 2.57
PTPMT1-205ENST00000534775 ARHGEF10O15013 1369 aa31.08■■■□□ 2.57
PTPMT1-205ENST00000534775 RIPK4P57078 832 aa31.07■■■□□ 2.56
PTPMT1-205ENST00000534775 PHRF1Q9P1Y6 1649 aaKnown RBP31.07■■■□□ 2.56
PTPMT1-205ENST00000534775 HOXC9P31274 260 aa31.06■■■□□ 2.56
PTPMT1-205ENST00000534775 RRP1P56182 461 aaKnown RBP31.06■■■□□ 2.56
PTPMT1-205ENST00000534775 NFE2L2Q16236 605 aa31.05■■■□□ 2.56
PTPMT1-205ENST00000534775 TRIM35Q9UPQ4 493 aa31.04■■■□□ 2.56
PTPMT1-205ENST00000534775 USP19O94966 1318 aa31.04■■■□□ 2.56
PTPMT1-205ENST00000534775 MYH16Q9H6N6 1097 aa31.03■■■□□ 2.56
PTPMT1-205ENST00000534775 SULT6B1Q6IMI4 303 aa31.02■■■□□ 2.56
PTPMT1-205ENST00000534775 LMOD2Q6P5Q4 547 aa31.02■■■□□ 2.56
PTPMT1-205ENST00000534775 IL16Q14005 1332 aa31.02■■■□□ 2.56
PTPMT1-205ENST00000534775 PHACTR3Q96KR7 559 aa31.02■■■□□ 2.56
PTPMT1-205ENST00000534775 GCP02774 474 aa30.99■■■□□ 2.55
PTPMT1-205ENST00000534775 IP6K1Q92551 441 aa30.99■■■□□ 2.55
PTPMT1-205ENST00000534775 PXDNQ92626 1479 aa30.99■■■□□ 2.55
PTPMT1-205ENST00000534775 LMOD3Q0VAK6 560 aa30.98■■■□□ 2.55
PTPMT1-205ENST00000534775 IGSF1Q8N6C5 1336 aa30.98■■■□□ 2.55
PTPMT1-205ENST00000534775 TNS3Q68CZ2 1445 aa30.97■■■□□ 2.55
PTPMT1-205ENST00000534775 SLAIN2Q9P270 581 aa30.97■■■□□ 2.55
PTPMT1-205ENST00000534775 DLG5Q8TDM6 1919 aa30.97■■■□□ 2.55
PTPMT1-205ENST00000534775 KDRP35968 1356 aa30.96■■■□□ 2.55
PTPMT1-205ENST00000534775 CALD1Q05682 793 aaKnown RBP30.96■■■□□ 2.55
PTPMT1-205ENST00000534775 BRINP3Q76B58 766 aa30.96■■■□□ 2.55
PTPMT1-205ENST00000534775 AEBP1Q8IUX7 1158 aa30.96■■■□□ 2.55
PTPMT1-205ENST00000534775 LTBP4Q8N2S1 1624 aa30.95■■■□□ 2.55
PTPMT1-205ENST00000534775 AEBP2Q6ZN18 517 aaPredicted RBP30.95■■■□□ 2.54
PTPMT1-205ENST00000534775 EYA1Q99502 592 aa30.94■■■□□ 2.54
PTPMT1-205ENST00000534775 PPP4R2Q9NY27 417 aa30.93■■■□□ 2.54
PTPMT1-205ENST00000534775 ARHGEF25Q86VW2 580 aa30.92■■■□□ 2.54
PTPMT1-205ENST00000534775 DDX17Q92841 729 aaKnown RBP30.92■■■□□ 2.54
PTPMT1-205ENST00000534775 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.91■■■□□ 2.54
PTPMT1-205ENST00000534775 MED1Q15648 1581 aaPredicted RBP30.91■■■□□ 2.54
PTPMT1-205ENST00000534775 SPATA31A3Q5VYP0 1347 aa30.89■■■□□ 2.54
PTPMT1-205ENST00000534775 FANCIQ9NVI1 1328 aa30.87■■■□□ 2.53
PTPMT1-205ENST00000534775 ZBTB7CA1YPR0 619 aa30.87■■■□□ 2.53
PTPMT1-205ENST00000534775 CT47B1P0C2W7 299 aaPredicted RBP30.87■■■□□ 2.53
PTPMT1-205ENST00000534775 LTV1Q96GA3 475 aaPredicted RBP30.87■■■□□ 2.53
PTPMT1-205ENST00000534775 CRYBG1Q9Y4K1 1723 aa30.85■■■□□ 2.53
PTPMT1-205ENST00000534775 PELP1Q8IZL8 1130 aaKnown RBP30.84■■■□□ 2.53
PTPMT1-205ENST00000534775 PLEKHG5O94827 1062 aa30.83■■■□□ 2.53
PTPMT1-205ENST00000534775 SOS2Q07890 1332 aaPredicted RBP30.83■■■□□ 2.53
PTPMT1-205ENST00000534775 NHSL1Q5SYE7 1610 aa30.82■■■□□ 2.52
PTPMT1-205ENST00000534775 ABCC6O95255 1503 aa30.81■■■□□ 2.52
PTPMT1-205ENST00000534775 GAS2L2Q8NHY3 880 aa30.81■■■□□ 2.52
PTPMT1-205ENST00000534775 TSR2Q969E8 191 aaKnown RBP30.81■■■□□ 2.52
PTPMT1-205ENST00000534775 IFT57Q9NWB7 429 aa30.81■■■□□ 2.52
PTPMT1-205ENST00000534775 GNAI1P63096 354 aa30.8■■■□□ 2.52
PTPMT1-205ENST00000534775 PLIN1O60240 522 aa30.8■■■□□ 2.52
PTPMT1-205ENST00000534775 RARSP54136 660 aaKnown RBP30.76■■■□□ 2.52
PTPMT1-205ENST00000534775 CAMTA1Q9Y6Y1 1673 aa30.76■■■□□ 2.52
PTPMT1-205ENST00000534775 RGPD2P0DJD1 1756 aa30.76■■■□□ 2.51
PTPMT1-205ENST00000534775 ZC3H6P61129 1189 aaKnown RBP30.76■■■□□ 2.51
PTPMT1-205ENST00000534775 EXOSC9Q06265 439 aaKnown RBP30.76■■■□□ 2.51
PTPMT1-205ENST00000534775 MTHFSDQ2M296 383 aaKnown RBP30.76■■■□□ 2.51
PTPMT1-205ENST00000534775 THUMPD2Q9BTF0 503 aaKnown RBP30.76■■■□□ 2.51
PTPMT1-205ENST00000534775 RGPD5Q99666 1765 aa30.75■■■□□ 2.51
PTPMT1-205ENST00000534775 BCAR3O75815 825 aa30.75■■■□□ 2.51
PTPMT1-205ENST00000534775 ANKRD24Q8TF21 1146 aa30.75■■■□□ 2.51
PTPMT1-205ENST00000534775 NCAPD2Q15021 1401 aa30.74■■■□□ 2.51
PTPMT1-205ENST00000534775 ZNF853P0CG23 659 aa30.74■■■□□ 2.51
PTPMT1-205ENST00000534775 NBPF6Q5VWK0 638 aa30.74■■■□□ 2.51
PTPMT1-205ENST00000534775 NBPF4Q96M43 638 aa30.74■■■□□ 2.51
PTPMT1-205ENST00000534775 CFAP44Q96MT7 982 aa30.74■■■□□ 2.51
PTPMT1-205ENST00000534775 LAS1LQ9Y4W2 734 aaKnown RBP30.74■■■□□ 2.51
PTPMT1-205ENST00000534775 CPDO75976 1380 aa30.73■■■□□ 2.51
PTPMT1-205ENST00000534775 COL18A1P39060 1754 aa30.73■■■□□ 2.51
PTPMT1-205ENST00000534775 FAM83GA6ND36 823 aa30.73■■■□□ 2.51
PTPMT1-205ENST00000534775 HTATSF1O43719 755 aaKnown RBP30.73■■■□□ 2.51
PTPMT1-205ENST00000534775 RTF1Q92541 710 aaKnown RBP30.73■■■□□ 2.51
PTPMT1-205ENST00000534775 USHBP1Q8N6Y0 703 aa30.71■■■□□ 2.51
PTPMT1-205ENST00000534775 EXOC6Q8TAG9 804 aa30.71■■■□□ 2.51
PTPMT1-205ENST00000534775 CABLES1Q8TDN4 633 aa30.7■■■□□ 2.51
PTPMT1-205ENST00000534775 FAM208AQ9UK61 1670 aaKnown RBP30.7■■■□□ 2.5
PTPMT1-205ENST00000534775 DCTN1Q14203 1278 aa30.69■■■□□ 2.5
PTPMT1-205ENST00000534775 AXIN2Q9Y2T1 843 aa30.69■■■□□ 2.5
PTPMT1-205ENST00000534775 ERBB3P21860 1342 aa30.68■■■□□ 2.5
PTPMT1-205ENST00000534775 CANXP27824 592 aaKnown RBP30.68■■■□□ 2.5
PTPMT1-205ENST00000534775 ZNF428Q96B54 188 aa30.68■■■□□ 2.5
PTPMT1-205ENST00000534775 LRRC59Q96AG4 307 aaKnown RBP30.67■■■□□ 2.5
PTPMT1-205ENST00000534775 CRBNQ96SW2 442 aa30.67■■■□□ 2.5
PTPMT1-205ENST00000534775 MBIPQ9NS73 344 aa30.67■■■□□ 2.5
PTPMT1-205ENST00000534775 LMO7Q8WWI1 1683 aa30.67■■■□□ 2.5
PTPMT1-205ENST00000534775 ABCA3Q99758 1704 aa30.67■■■□□ 2.5
PTPMT1-205ENST00000534775 B4GALNT3Q6L9W6 998 aa30.66■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms