RNA–Protein interactions for RNA: ENST00000534440.5

RPS3-219, Transcript of ribosomal protein S3, humanhuman

TSL 2 BASIC

Gene RPS3, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-219ENST00000534440 NUTM2GQ5VZR2 741 aa13.48□□□□□ -0.25
RPS3-219ENST00000534440 TRPC5Q9UL62 973 aaPredicted RBP13.48□□□□□ -0.25
RPS3-219ENST00000534440 EMILIN1Q9Y6C2 1016 aa13.48□□□□□ -0.25
RPS3-219ENST00000534440 CRYBG1Q9Y4K1 1723 aa13.47□□□□□ -0.25
RPS3-219ENST00000534440 INSRP06213 1382 aa13.47□□□□□ -0.25
RPS3-219ENST00000534440 PAK3O75914 559 aaPredicted RBP13.47□□□□□ -0.25
RPS3-219ENST00000534440 HNRNPUQ00839 825 aaKnown RBP eCLIP13.47□□□□□ -0.25
RPS3-219ENST00000534440 RRS1Q15050 365 aaKnown RBP13.47□□□□□ -0.25
RPS3-219ENST00000534440 KRT28Q7Z3Y7 464 aa13.47□□□□□ -0.25
RPS3-219ENST00000534440 BCL9LQ86UU0 1499 aa13.47□□□□□ -0.25
RPS3-219ENST00000534440 NPHP3Q7Z494 1330 aa13.46□□□□□ -0.25
RPS3-219ENST00000534440 ADAMTS8Q9UP79 889 aa13.46□□□□□ -0.25
RPS3-219ENST00000534440 TNS3Q68CZ2 1445 aa13.46□□□□□ -0.26
RPS3-219ENST00000534440 PHRF1Q9P1Y6 1649 aaKnown RBP13.46□□□□□ -0.26
RPS3-219ENST00000534440 SENP3-EIF4A1A0A087X0R7 540 aa13.45□□□□□ -0.26
RPS3-219ENST00000534440 SOX12O15370 315 aa13.45□□□□□ -0.26
RPS3-219ENST00000534440 NLRP6P59044 892 aa13.45□□□□□ -0.26
RPS3-219ENST00000534440 ABTB2Q8N961 1025 aa13.45□□□□□ -0.26
RPS3-219ENST00000534440 SBNO1A3KN83 1393 aa13.45□□□□□ -0.26
RPS3-219ENST00000534440 USP19O94966 1318 aa13.44□□□□□ -0.26
RPS3-219ENST00000534440 WDR43Q15061 677 aaKnown RBP eCLIP13.44□□□□□ -0.26
RPS3-219ENST00000534440 LTN1O94822 1766 aa13.44□□□□□ -0.26
RPS3-219ENST00000534440 MAP3K19Q56UN5 1328 aa13.43□□□□□ -0.26
RPS3-219ENST00000534440 CFAP53Q96M91 514 aa13.43□□□□□ -0.26
RPS3-219ENST00000534440 RGPD1P0DJD0 1748 aa13.42□□□□□ -0.26
RPS3-219ENST00000534440 ABCA3Q99758 1704 aa13.42□□□□□ -0.26
RPS3-219ENST00000534440 PPM1GO15355 546 aaPredicted RBP13.42□□□□□ -0.26
RPS3-219ENST00000534440 COL22A1Q8NFW1 1626 aaPredicted RBP13.42□□□□□ -0.26
RPS3-219ENST00000534440 ZBED9Q6R2W3 1325 aa13.41□□□□□ -0.26
RPS3-219ENST00000534440 GJD4Q96KN9 370 aaPredicted RBP13.41□□□□□ -0.26
RPS3-219ENST00000534440 SPATA31A3Q5VYP0 1347 aa13.4□□□□□ -0.26
RPS3-219ENST00000534440 CCDC146Q8IYE0 955 aa13.4□□□□□ -0.26
RPS3-219ENST00000534440 DIAPH1O60610 1272 aaKnown RBP13.39□□□□□ -0.27
RPS3-219ENST00000534440 CENPBP07199 599 aaPredicted RBP13.39□□□□□ -0.27
RPS3-219ENST00000534440 IL13P35225 146 aa13.39□□□□□ -0.27
RPS3-219ENST00000534440 FLT4P35916 1363 aa13.39□□□□□ -0.27
RPS3-219ENST00000534440 SLIT2O94813 1529 aa13.39□□□□□ -0.27
RPS3-219ENST00000534440 RTL1A6NKG5 1358 aa13.38□□□□□ -0.27
RPS3-219ENST00000534440 HSP90AB2PQ58FF8 381 aa13.38□□□□□ -0.27
RPS3-219ENST00000534440 LMOD2Q6P5Q4 547 aa13.38□□□□□ -0.27
RPS3-219ENST00000534440 CCDC125Q86Z20 511 aa13.38□□□□□ -0.27
RPS3-219ENST00000534440 UNC5CLQ8IV45 518 aa13.38□□□□□ -0.27
RPS3-219ENST00000534440 ARHGEF10O15013 1369 aa13.37□□□□□ -0.27
RPS3-219ENST00000534440 KIF24Q5T7B8 1368 aa13.37□□□□□ -0.27
RPS3-219ENST00000534440 U2SURPO15042 1029 aaKnown RBP13.37□□□□□ -0.27
RPS3-219ENST00000534440 PLEKHG5O94827 1062 aa13.37□□□□□ -0.27
RPS3-219ENST00000534440 U2AF1L5P0DN76 240 aaPredicted RBP13.37□□□□□ -0.27
RPS3-219ENST00000534440 U2AF1Q01081 240 aaKnown RBP eCLIP13.37□□□□□ -0.27
RPS3-219ENST00000534440 EIF4A2Q14240 407 aaKnown RBP13.37□□□□□ -0.27
RPS3-219ENST00000534440 GCP02774 474 aa13.36□□□□□ -0.27
RPS3-219ENST00000534440 HOXC9P31274 260 aa13.36□□□□□ -0.27
RPS3-219ENST00000534440 COL18A1P39060 1754 aa13.35□□□□□ -0.27
RPS3-219ENST00000534440 KCNH5Q8NCM2 988 aa13.35□□□□□ -0.27
RPS3-219ENST00000534440 ONECUT3O60422 494 aaPredicted RBP13.34□□□□□ -0.27
RPS3-219ENST00000534440 AMPHP49418 695 aa13.34□□□□□ -0.27
RPS3-219ENST00000534440 ARHGEF25Q86VW2 580 aa13.34□□□□□ -0.27
RPS3-219ENST00000534440 CABLES1Q8TDN4 633 aa13.34□□□□□ -0.27
RPS3-219ENST00000534440 PLEKHF1Q96S99 279 aa13.34□□□□□ -0.27
RPS3-219ENST00000534440 RSPH6AQ9H0K4 717 aa13.34□□□□□ -0.27
RPS3-219ENST00000534440 NUDCQ9Y266 331 aa13.34□□□□□ -0.27
RPS3-219ENST00000534440 RGPD5Q99666 1765 aa13.33□□□□□ -0.28
RPS3-219ENST00000534440 APAF1O14727 1248 aa13.33□□□□□ -0.28
RPS3-219ENST00000534440 RUNDC1Q96C34 613 aa13.33□□□□□ -0.28
RPS3-219ENST00000534440 SALL2Q9Y467 1007 aaPredicted RBP13.33□□□□□ -0.28
RPS3-219ENST00000534440 CAMTA1Q9Y6Y1 1673 aa13.33□□□□□ -0.28
RPS3-219ENST00000534440 ZNF521Q96K83 1311 aa13.33□□□□□ -0.28
RPS3-219ENST00000534440 RGPD2P0DJD1 1756 aa13.32□□□□□ -0.28
RPS3-219ENST00000534440 HMOX1P09601 288 aa13.32□□□□□ -0.28
RPS3-219ENST00000534440 AEBP1Q8IUX7 1158 aa13.32□□□□□ -0.28
RPS3-219ENST00000534440 ABCC6O95255 1503 aa13.32□□□□□ -0.28
RPS3-219ENST00000534440 VPS72Q15906 364 aa13.31□□□□□ -0.28
RPS3-219ENST00000534440 IP6K1Q92551 441 aa13.31□□□□□ -0.28
RPS3-219ENST00000534440 IGSF1Q8N6C5 1336 aa13.31□□□□□ -0.28
RPS3-219ENST00000534440 LMO7Q8WWI1 1683 aa13.31□□□□□ -0.28
RPS3-219ENST00000534440 GLI3P10071 1580 aa13.3□□□□□ -0.28
RPS3-219ENST00000534440 ZBTB7CA1YPR0 619 aa13.3□□□□□ -0.28
RPS3-219ENST00000534440 PRKAR2BP31323 418 aa13.3□□□□□ -0.28
RPS3-219ENST00000534440 ZC3H6P61129 1189 aaKnown RBP13.3□□□□□ -0.28
RPS3-219ENST00000534440 SEPT12Q8IYM1 358 aa13.3□□□□□ -0.28
RPS3-219ENST00000534440 TCP11L2Q8N4U5 519 aa13.3□□□□□ -0.28
RPS3-219ENST00000534440 RRP7AQ9Y3A4 280 aaKnown RBP13.3□□□□□ -0.28
RPS3-219ENST00000534440 CPDO75976 1380 aa13.3□□□□□ -0.28
RPS3-219ENST00000534440 KDRP35968 1356 aa13.3□□□□□ -0.28
RPS3-219ENST00000534440 KIAA0232Q92628 1395 aa13.3□□□□□ -0.28
RPS3-219ENST00000534440 FAM83GA6ND36 823 aa13.29□□□□□ -0.28
RPS3-219ENST00000534440 DEFB132Q7Z7B7 95 aa13.29□□□□□ -0.28
RPS3-219ENST00000534440 NCAPD2Q15021 1401 aa13.29□□□□□ -0.28
RPS3-219ENST00000534440 FCHSD2O94868 740 aa13.28□□□□□ -0.28
RPS3-219ENST00000534440 LTV1Q96GA3 475 aaPredicted RBP13.28□□□□□ -0.28
RPS3-219ENST00000534440 EYA1Q99502 592 aa13.28□□□□□ -0.28
RPS3-219ENST00000534440 AXIN2Q9Y2T1 843 aa13.28□□□□□ -0.28
RPS3-219ENST00000534440 FAM208AQ9UK61 1670 aaKnown RBP13.28□□□□□ -0.28
RPS3-219ENST00000534440 SULT6B1Q6IMI4 303 aa13.27□□□□□ -0.29
RPS3-219ENST00000534440 CDCA7LQ96GN5 454 aa13.27□□□□□ -0.29
RPS3-219ENST00000534440 PHACTR3Q96KR7 559 aa13.27□□□□□ -0.29
RPS3-219ENST00000534440 CHRNA2Q15822 529 aa13.26□□□□□ -0.29
RPS3-219ENST00000534440 DLG5Q8TDM6 1919 aa13.26□□□□□ -0.29
RPS3-219ENST00000534440 ERBB3P21860 1342 aa13.25□□□□□ -0.29
RPS3-219ENST00000534440 MAPK8IP3Q9UPT6 1336 aa13.25□□□□□ -0.29
RPS3-219ENST00000534440 TMPOP42166 694 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms