RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 ANKRD20A12PQ8NF67 263 aa4.84□□□□□ -1.64
SOX6-217ENST00000533870 GAS2L2Q8NHY3 880 aa4.84□□□□□ -1.64
SOX6-217ENST00000533870 TUBB2BQ9BVA1 445 aa4.84□□□□□ -1.64
SOX6-217ENST00000533870 ANO2Q9NQ90 1003 aa4.84□□□□□ -1.64
SOX6-217ENST00000533870 RTEL1-TNFRSF6BF6WH68 1400 aa4.84□□□□□ -1.64
SOX6-217ENST00000533870 ARHGEF11O15085 1522 aa4.83□□□□□ -1.64
SOX6-217ENST00000533870 PCF11O94913 1555 aaKnown RBP4.83□□□□□ -1.64
SOX6-217ENST00000533870 DHX16O60231 1041 aaKnown RBP4.83□□□□□ -1.64
SOX6-217ENST00000533870 ASXL2Q76L83 1435 aa4.83□□□□□ -1.64
SOX6-217ENST00000533870 IPO7O95373 1038 aaKnown RBP4.83□□□□□ -1.64
SOX6-217ENST00000533870 OS9Q13438 667 aaPredicted RBP4.83□□□□□ -1.64
SOX6-217ENST00000533870 PDLIM2Q96JY6 352 aa4.83□□□□□ -1.64
SOX6-217ENST00000533870 ZNF396Q96N95 335 aaPredicted RBP4.83□□□□□ -1.64
SOX6-217ENST00000533870 LNPKQ9C0E8 428 aa4.83□□□□□ -1.64
SOX6-217ENST00000533870 MCM3P25205 808 aa4.83□□□□□ -1.64
SOX6-217ENST00000533870 MAGI1Q96QZ7 1491 aaPredicted RBP4.83□□□□□ -1.64
SOX6-217ENST00000533870 SUPT6HQ7KZ85 1726 aaKnown RBP4.83□□□□□ -1.64
SOX6-217ENST00000533870 NEK4P51957 841 aa4.83□□□□□ -1.64
SOX6-217ENST00000533870 KRT222Q8N1A0 295 aa4.83□□□□□ -1.64
SOX6-217ENST00000533870 PIBF1Q8WXW3 757 aa4.83□□□□□ -1.64
SOX6-217ENST00000533870 CFAP45Q9UL16 551 aa4.83□□□□□ -1.64
SOX6-217ENST00000533870 ZSCAN12O43309 604 aa4.83□□□□□ -1.64
SOX6-217ENST00000533870 MTHFSP49914 203 aa4.83□□□□□ -1.64
SOX6-217ENST00000533870 HNRNPMP52272 730 aaKnown RBP eCLIP4.83□□□□□ -1.64
SOX6-217ENST00000533870 ZNF644Q9H582 1327 aaPredicted RBP4.83□□□□□ -1.64
SOX6-217ENST00000533870 NFE2L2Q16236 605 aa4.82□□□□□ -1.64
SOX6-217ENST00000533870 COG3Q96JB2 828 aa4.82□□□□□ -1.64
SOX6-217ENST00000533870 OGFRQ9NZT2 677 aa4.82□□□□□ -1.64
SOX6-217ENST00000533870 ABCC2Q92887 1545 aa4.82□□□□□ -1.64
SOX6-217ENST00000533870 GPATCH8Q9UKJ3 1502 aaKnown RBP4.82□□□□□ -1.64
SOX6-217ENST00000533870 PTPRCP08575 1304 aa4.82□□□□□ -1.64
SOX6-217ENST00000533870 RAB11FIP3O75154 756 aa4.82□□□□□ -1.64
SOX6-217ENST00000533870 PRPF40AO75400 957 aaKnown RBP4.82□□□□□ -1.64
SOX6-217ENST00000533870 YEATS2Q9ULM3 1422 aa4.82□□□□□ -1.64
SOX6-217ENST00000533870 KIF18AQ8NI77 898 aa4.82□□□□□ -1.64
SOX6-217ENST00000533870 DACH1Q9UI36 760 aa4.82□□□□□ -1.64
SOX6-217ENST00000533870 IQSEC3Q9UPP2 1182 aaPredicted RBP4.82□□□□□ -1.64
SOX6-217ENST00000533870 NUCB1Q02818 461 aa4.82□□□□□ -1.64
SOX6-217ENST00000533870 TWISTNBQ3B726 338 aaPredicted RBP4.82□□□□□ -1.64
SOX6-217ENST00000533870 MAP3K11Q16584 847 aa4.82□□□□□ -1.64
SOX6-217ENST00000533870 CLASRPQ8N2M8 674 aaKnown RBP4.82□□□□□ -1.64
SOX6-217ENST00000533870 UBE2HP62256 183 aa4.82□□□□□ -1.64
SOX6-217ENST00000533870 CCDC146Q8IYE0 955 aa4.82□□□□□ -1.64
SOX6-217ENST00000533870 ANTXR1Q9H6X2 564 aa4.82□□□□□ -1.64
SOX6-217ENST00000533870 DCTPP1Q9H773 170 aa4.82□□□□□ -1.64
SOX6-217ENST00000533870 ELP1O95163 1332 aa4.82□□□□□ -1.64
SOX6-217ENST00000533870 PRG4Q92954 1404 aaPredicted RBP4.82□□□□□ -1.64
SOX6-217ENST00000533870 BCAR3O75815 825 aa4.81□□□□□ -1.64
SOX6-217ENST00000533870 MCTP1Q6DN14 999 aa4.81□□□□□ -1.64
SOX6-217ENST00000533870 MYRIPQ8NFW9 859 aa4.81□□□□□ -1.64
SOX6-217ENST00000533870 NUP62CLQ9H1M0 184 aa4.81□□□□□ -1.64
SOX6-217ENST00000533870 PODXL2Q9NZ53 605 aa4.81□□□□□ -1.64
SOX6-217ENST00000533870 MRC2Q9UBG0 1479 aa4.81□□□□□ -1.64
SOX6-217ENST00000533870 ZFYVE9O95405 1425 aa4.81□□□□□ -1.64
SOX6-217ENST00000533870 SMTNL1A8MU46 457 aa4.81□□□□□ -1.64
SOX6-217ENST00000533870 KINO60870 393 aaKnown RBP4.81□□□□□ -1.64
SOX6-217ENST00000533870 UBXN4Q92575 508 aa4.81□□□□□ -1.64
SOX6-217ENST00000533870 IVLP07476 585 aa4.81□□□□□ -1.64
SOX6-217ENST00000533870 ANKRD44Q8N8A2 993 aa4.81□□□□□ -1.64
SOX6-217ENST00000533870 CCDC150Q8NCX0 1101 aa4.81□□□□□ -1.64
SOX6-217ENST00000533870 C14orf93Q9H972 538 aaKnown RBP4.81□□□□□ -1.64
SOX6-217ENST00000533870 PZPP20742 1482 aa4.81□□□□□ -1.64
SOX6-217ENST00000533870 TMCO3Q6UWJ1 677 aa4.81□□□□□ -1.64
SOX6-217ENST00000533870 DNAJC2Q99543 621 aaKnown RBP4.81□□□□□ -1.64
SOX6-217ENST00000533870 GLRX3O76003 335 aaKnown RBP4.81□□□□□ -1.64
SOX6-217ENST00000533870 TRIM5Q9C035 493 aa4.81□□□□□ -1.64
SOX6-217ENST00000533870 HMG20BQ9P0W2 317 aa4.81□□□□□ -1.64
SOX6-217ENST00000533870 CYP46A1Q9Y6A2 500 aa4.81□□□□□ -1.64
SOX6-217ENST00000533870 DDX58O95786 925 aaKnown RBP4.81□□□□□ -1.64
SOX6-217ENST00000533870 TMPOP42166 694 aaKnown RBP4.81□□□□□ -1.64
SOX6-217ENST00000533870 IQCEQ6IPM2 695 aa4.81□□□□□ -1.64
SOX6-217ENST00000533870 CNTROBQ8N137 903 aa4.81□□□□□ -1.64
SOX6-217ENST00000533870 DNAAF4Q8WXU2 420 aa4.81□□□□□ -1.64
SOX6-217ENST00000533870 ZBTB40Q9NUA8 1239 aa4.81□□□□□ -1.64
SOX6-217ENST00000533870 IQGAP2Q13576 1575 aa4.8□□□□□ -1.64
SOX6-217ENST00000533870 ASXL1Q8IXJ9 1541 aa4.8□□□□□ -1.64
SOX6-217ENST00000533870 GNAI2P04899 355 aa4.8□□□□□ -1.64
SOX6-217ENST00000533870 NOLC1Q14978 699 aaKnown RBP eCLIP4.8□□□□□ -1.64
SOX6-217ENST00000533870 CCDC83Q8IWF9 413 aa4.8□□□□□ -1.64
SOX6-217ENST00000533870 SSH1Q8WYL5 1049 aa4.8□□□□□ -1.64
SOX6-217ENST00000533870 TM6SF1Q9BZW5 370 aa4.8□□□□□ -1.64
SOX6-217ENST00000533870 ANO10Q9NW15 660 aa4.8□□□□□ -1.64
SOX6-217ENST00000533870 HMGB1P09429 215 aaKnown RBP4.8□□□□□ -1.64
SOX6-217ENST00000533870 ZNF397Q8NF99 534 aaPredicted RBP4.8□□□□□ -1.64
SOX6-217ENST00000533870 LIMCH1Q9UPQ0 1083 aa4.8□□□□□ -1.64
SOX6-217ENST00000533870 MBD5Q9P267 1494 aa4.8□□□□□ -1.64
SOX6-217ENST00000533870 SFPQP23246 707 aaKnown RBP eCLIP4.8□□□□□ -1.64
SOX6-217ENST00000533870 SF3A1Q15459 793 aaKnown RBP4.8□□□□□ -1.64
SOX6-217ENST00000533870 LEKR1Q6ZMV7 388 aa4.8□□□□□ -1.64
SOX6-217ENST00000533870 TIGD1Q96MW7 591 aa4.8□□□□□ -1.64
SOX6-217ENST00000533870 BICRAQ9NZM4 1560 aa4.8□□□□□ -1.64
SOX6-217ENST00000533870 NAP1L2Q9ULW6 460 aaPredicted RBP4.8□□□□□ -1.64
SOX6-217ENST00000533870 TRAPPC8Q9Y2L5 1435 aa4.8□□□□□ -1.64
SOX6-217ENST00000533870 BICD2Q8TD16 824 aa4.8□□□□□ -1.64
SOX6-217ENST00000533870 SLFNL1Q499Z3 407 aa4.8□□□□□ -1.64
SOX6-217ENST00000533870 CCDC30Q5VVM6 783 aa4.8□□□□□ -1.64
SOX6-217ENST00000533870 ERO1AQ96HE7 468 aa4.8□□□□□ -1.64
SOX6-217ENST00000533870 HOXB7P09629 217 aa4.79□□□□□ -1.64
SOX6-217ENST00000533870 TRIM27P14373 513 aa4.79□□□□□ -1.64
SOX6-217ENST00000533870 TTC22Q5TAA0 569 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 124.8 ms