RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 COL18A1P39060 1754 aa18.12■□□□□ 0.49
CAPN1-223ENST00000533079 ABCC6O95255 1503 aa18.12■□□□□ 0.49
CAPN1-223ENST00000533079 WDR17Q8IZU2 1322 aa18.11■□□□□ 0.49
CAPN1-223ENST00000533079 CPSF1Q10570 1443 aaKnown RBP18.11■□□□□ 0.49
CAPN1-223ENST00000533079 SRPK2P78362 688 aaKnown RBP18.1■□□□□ 0.49
CAPN1-223ENST00000533079 TOM1L2Q6ZVM7 507 aa18.09■□□□□ 0.49
CAPN1-223ENST00000533079 TRPM1Q7Z4N2 1603 aa18.09■□□□□ 0.49
CAPN1-223ENST00000533079 CENPJQ9HC77 1338 aaPredicted RBP18.08■□□□□ 0.49
CAPN1-223ENST00000533079 PTGER2P43116 358 aa18.08■□□□□ 0.48
CAPN1-223ENST00000533079 NHSQ6T4R5 1651 aa18.08■□□□□ 0.48
CAPN1-223ENST00000533079 NLRP6P59044 892 aa18.07■□□□□ 0.48
CAPN1-223ENST00000533079 TNS2Q63HR2 1409 aa18.06■□□□□ 0.48
CAPN1-223ENST00000533079 ZNF784Q8NCA9 323 aaPredicted RBP18.06■□□□□ 0.48
CAPN1-223ENST00000533079 STK32BQ9NY57 414 aa18.06■□□□□ 0.48
CAPN1-223ENST00000533079 ZBTB7AO95365 584 aa18.05■□□□□ 0.48
CAPN1-223ENST00000533079 MARCH10Q8NA82 808 aaPredicted RBP18.05■□□□□ 0.48
CAPN1-223ENST00000533079 MTFR1LQ9H019 292 aa18.05■□□□□ 0.48
CAPN1-223ENST00000533079 PAPPAQ13219 1627 aa18.05■□□□□ 0.48
CAPN1-223ENST00000533079 MAP3K5Q99683 1374 aa18.04■□□□□ 0.48
CAPN1-223ENST00000533079 ZBTB7CA1YPR0 619 aa18.04■□□□□ 0.48
CAPN1-223ENST00000533079 SLC15A2Q16348 729 aa18.04■□□□□ 0.48
CAPN1-223ENST00000533079 PROM2Q8N271 834 aa18.04■□□□□ 0.48
CAPN1-223ENST00000533079 CCDC7Q96M83 1385 aa18.04■□□□□ 0.48
CAPN1-223ENST00000533079 TXNRD1Q16881 649 aa18.03■□□□□ 0.48
CAPN1-223ENST00000533079 KCNH5Q8NCM2 988 aa18.03■□□□□ 0.48
CAPN1-223ENST00000533079 CARD10Q9BWT7 1032 aa18.03■□□□□ 0.48
CAPN1-223ENST00000533079 PDGFDQ9GZP0 370 aaPredicted RBP18.03■□□□□ 0.48
CAPN1-223ENST00000533079 CABP2Q9NPB3 220 aa18.03■□□□□ 0.48
CAPN1-223ENST00000533079 CHD4Q14839 1912 aa18.02■□□□□ 0.48
CAPN1-223ENST00000533079 SYT17Q9BSW7 474 aa18.02■□□□□ 0.48
CAPN1-223ENST00000533079 NFAT5O94916 1531 aa18.02■□□□□ 0.47
CAPN1-223ENST00000533079 PTF1AQ7RTS3 328 aa18.01■□□□□ 0.47
CAPN1-223ENST00000533079 FHDC1Q9C0D6 1143 aaPredicted RBP18.01■□□□□ 0.47
CAPN1-223ENST00000533079 CABP1Q9NZU7 370 aa18.01■□□□□ 0.47
CAPN1-223ENST00000533079 RGPD5Q99666 1765 aa18■□□□□ 0.47
CAPN1-223ENST00000533079 ARHGEF25Q86VW2 580 aa18■□□□□ 0.47
CAPN1-223ENST00000533079 SGIP1Q9BQI5 828 aa18■□□□□ 0.47
CAPN1-223ENST00000533079 AXIN2Q9Y2T1 843 aa18■□□□□ 0.47
CAPN1-223ENST00000533079 USP54Q70EL1 1684 aa17.99■□□□□ 0.47
CAPN1-223ENST00000533079 NBPF1Q3BBV0 1214 aa17.99■□□□□ 0.47
CAPN1-223ENST00000533079 ATF5Q9Y2D1 282 aaPredicted RBP17.99■□□□□ 0.47
CAPN1-223ENST00000533079 TTC21AQ8NDW8 1320 aa17.98■□□□□ 0.47
CAPN1-223ENST00000533079 EXOC5O00471 708 aa17.98■□□□□ 0.47
CAPN1-223ENST00000533079 ZNF692Q9BU19 519 aaPredicted RBP17.98■□□□□ 0.47
CAPN1-223ENST00000533079 QSER1Q2KHR3 1735 aa17.98■□□□□ 0.47
CAPN1-223ENST00000533079 EVC2Q86UK5 1308 aa17.98■□□□□ 0.47
CAPN1-223ENST00000533079 CSB-PGBD3P0DP91 1061 aa17.97■□□□□ 0.47
CAPN1-223ENST00000533079 TTC21BQ7Z4L5 1316 aa17.96■□□□□ 0.46
CAPN1-223ENST00000533079 MON2Q7Z3U7 1717 aa17.95■□□□□ 0.46
CAPN1-223ENST00000533079 SENP3-EIF4A1A0A087X0R7 540 aa17.95■□□□□ 0.46
CAPN1-223ENST00000533079 C1QTNF8P60827 252 aa17.95■□□□□ 0.46
CAPN1-223ENST00000533079 ARXQ96QS3 562 aa17.95■□□□□ 0.46
CAPN1-223ENST00000533079 BTAF1O14981 1849 aa17.94■□□□□ 0.46
CAPN1-223ENST00000533079 COL24A1Q17RW2 1714 aa17.94■□□□□ 0.46
CAPN1-223ENST00000533079 ERBB3P21860 1342 aa17.91■□□□□ 0.46
CAPN1-223ENST00000533079 LTN1O94822 1766 aa17.9■□□□□ 0.46
CAPN1-223ENST00000533079 FAM208AQ9UK61 1670 aaKnown RBP17.9■□□□□ 0.46
CAPN1-223ENST00000533079 GOLGB1Q14789 3259 aaKnown RBP17.89■□□□□ 0.45
CAPN1-223ENST00000533079 SLC16A10Q8TF71 515 aa17.89■□□□□ 0.45
CAPN1-223ENST00000533079 USP31Q70CQ4 1352 aa17.89■□□□□ 0.45
CAPN1-223ENST00000533079 KTN1Q86UP2 1357 aaKnown RBP17.89■□□□□ 0.45
CAPN1-223ENST00000533079 SOX12O15370 315 aa17.87■□□□□ 0.45
CAPN1-223ENST00000533079 IL2RBP14784 551 aa17.87■□□□□ 0.45
CAPN1-223ENST00000533079 GIGYF1O75420 1035 aaPredicted RBP17.86■□□□□ 0.45
CAPN1-223ENST00000533079 SLC27A3Q5K4L6 730 aa17.86■□□□□ 0.45
CAPN1-223ENST00000533079 ACSBG1Q96GR2 724 aa17.86■□□□□ 0.45
CAPN1-223ENST00000533079 POLD1P28340 1107 aa17.85■□□□□ 0.45
CAPN1-223ENST00000533079 GPR162Q16538 588 aa17.85■□□□□ 0.45
CAPN1-223ENST00000533079 ZNF827Q17R98 1081 aa17.85■□□□□ 0.45
CAPN1-223ENST00000533079 SHANK3Q9BYB0 1731 aa17.85■□□□□ 0.45
CAPN1-223ENST00000533079 SBNO2Q9Y2G9 1366 aa17.84■□□□□ 0.45
CAPN1-223ENST00000533079 ROCK2O75116 1388 aaKnown RBP17.83■□□□□ 0.45
CAPN1-223ENST00000533079 AKT1S1Q96B36 256 aa17.83■□□□□ 0.44
CAPN1-223ENST00000533079 NLRP2Q9NX02 1062 aa17.83■□□□□ 0.44
CAPN1-223ENST00000533079 TUBGCP6Q96RT7 1819 aa17.82■□□□□ 0.44
CAPN1-223ENST00000533079 LY75O60449 1722 aa17.82■□□□□ 0.44
CAPN1-223ENST00000533079 LRRC4BQ9NT99 713 aa17.82■□□□□ 0.44
CAPN1-223ENST00000533079 IFFO2Q5TF58 517 aa17.81■□□□□ 0.44
CAPN1-223ENST00000533079 ANKRD24Q8TF21 1146 aa17.8■□□□□ 0.44
CAPN1-223ENST00000533079 DOT1LQ8TEK3 1739 aa17.8■□□□□ 0.44
CAPN1-223ENST00000533079 CD163L1Q9NR16 1453 aa17.8■□□□□ 0.44
CAPN1-223ENST00000533079 EDC4Q6P2E9 1401 aaKnown RBP17.8■□□□□ 0.44
CAPN1-223ENST00000533079 PNPLA7Q6ZV29 1317 aa17.79■□□□□ 0.44
CAPN1-223ENST00000533079 CEP350Q5VT06 3117 aa17.78■□□□□ 0.44
CAPN1-223ENST00000533079 ANKRD36BQ8N2N9 1353 aa17.78■□□□□ 0.44
CAPN1-223ENST00000533079 L3MBTL2Q969R5 705 aa17.77■□□□□ 0.44
CAPN1-223ENST00000533079 GRIN3BO60391 1043 aa17.76■□□□□ 0.43
CAPN1-223ENST00000533079 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.76■□□□□ 0.43
CAPN1-223ENST00000533079 KLHL34Q8N239 644 aa17.76■□□□□ 0.43
CAPN1-223ENST00000533079 TFCP2L1Q9NZI6 479 aa17.76■□□□□ 0.43
CAPN1-223ENST00000533079 HDGFL2Q7Z4V5 671 aaPredicted RBP17.74■□□□□ 0.43
CAPN1-223ENST00000533079 NME9Q86XW9 330 aa17.74■□□□□ 0.43
CAPN1-223ENST00000533079 PELP1Q8IZL8 1130 aaKnown RBP17.74■□□□□ 0.43
CAPN1-223ENST00000533079 NSD2O96028 1365 aa17.73■□□□□ 0.43
CAPN1-223ENST00000533079 HMGB2P26583 209 aaKnown RBP17.72■□□□□ 0.43
CAPN1-223ENST00000533079 NLGN2Q8NFZ4 835 aa17.72■□□□□ 0.43
CAPN1-223ENST00000533079 C5P01031 1676 aa17.71■□□□□ 0.43
CAPN1-223ENST00000533079 IP6K1Q92551 441 aa17.71■□□□□ 0.43
CAPN1-223ENST00000533079 A0A1W2PP64 1363 aa17.7■□□□□ 0.42
CAPN1-223ENST00000533079 DDX54Q8TDD1 881 aaKnown RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms