RNA–Protein interactions for RNA: ENST00000532781.1

ARID1A-208, Transcript of AT-rich interaction domain 1A, humanhuman

TSL 1 (best)

Gene ARID1A, Length 2,583 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1A-208ENST00000532781 MAP3K19Q56UN5 1328 aa18.16■□□□□ 0.5
ARID1A-208ENST00000532781 NLRP6P59044 892 aa18.15■□□□□ 0.5
ARID1A-208ENST00000532781 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.15■□□□□ 0.5
ARID1A-208ENST00000532781 MYH16Q9H6N6 1097 aa18.15■□□□□ 0.5
ARID1A-208ENST00000532781 NPHP4O75161 1426 aaPredicted RBP18.15■□□□□ 0.5
ARID1A-208ENST00000532781 ELL2O00472 640 aaPredicted RBP18.13■□□□□ 0.49
ARID1A-208ENST00000532781 TCERG1O14776 1098 aaKnown RBP18.13■□□□□ 0.49
ARID1A-208ENST00000532781 HSPA2P54652 639 aa18.13■□□□□ 0.49
ARID1A-208ENST00000532781 ESCO1Q5FWF5 840 aa18.13■□□□□ 0.49
ARID1A-208ENST00000532781 NFE2L2Q16236 605 aa18.12■□□□□ 0.49
ARID1A-208ENST00000532781 ABTB2Q8N961 1025 aa18.12■□□□□ 0.49
ARID1A-208ENST00000532781 ORAI2Q96SN7 254 aa18.12■□□□□ 0.49
ARID1A-208ENST00000532781 MARF1Q9Y4F3 1742 aaKnown RBP18.12■□□□□ 0.49
ARID1A-208ENST00000532781 ZBTB7CA1YPR0 619 aa18.11■□□□□ 0.49
ARID1A-208ENST00000532781 PIK3R4Q99570 1358 aa18.11■□□□□ 0.49
ARID1A-208ENST00000532781 NEFMP07197 916 aa18.11■□□□□ 0.49
ARID1A-208ENST00000532781 LTV1Q96GA3 475 aaPredicted RBP18.11■□□□□ 0.49
ARID1A-208ENST00000532781 SSH1Q8WYL5 1049 aa18.1■□□□□ 0.49
ARID1A-208ENST00000532781 PHF8Q9UPP1 1060 aa18.1■□□□□ 0.49
ARID1A-208ENST00000532781 SMC4Q9NTJ3 1288 aa18.09■□□□□ 0.49
ARID1A-208ENST00000532781 USP31Q70CQ4 1352 aa18.09■□□□□ 0.49
ARID1A-208ENST00000532781 FOXO3O43524 673 aa18.09■□□□□ 0.49
ARID1A-208ENST00000532781 TSPYL6Q8N831 410 aa18.09■□□□□ 0.49
ARID1A-208ENST00000532781 AMPHP49418 695 aa18.08■□□□□ 0.49
ARID1A-208ENST00000532781 IGHDP01880 384 aa18.08■□□□□ 0.48
ARID1A-208ENST00000532781 MCM10Q7L590 875 aa18.08■□□□□ 0.48
ARID1A-208ENST00000532781 PNNQ9H307 717 aaKnown RBP18.08■□□□□ 0.48
ARID1A-208ENST00000532781 TTC21AQ8NDW8 1320 aa18.08■□□□□ 0.48
ARID1A-208ENST00000532781 KDM2BQ8NHM5 1336 aa18.08■□□□□ 0.48
ARID1A-208ENST00000532781 ANKARQ7Z5J8 1434 aa18.06■□□□□ 0.48
ARID1A-208ENST00000532781 KRT24Q2M2I5 525 aa18.06■□□□□ 0.48
ARID1A-208ENST00000532781 LMOD2Q6P5Q4 547 aa18.06■□□□□ 0.48
ARID1A-208ENST00000532781 DDX17Q92841 729 aaKnown RBP18.06■□□□□ 0.48
ARID1A-208ENST00000532781 ADGRL3Q9HAR2 1447 aa18.05■□□□□ 0.48
ARID1A-208ENST00000532781 PROSER2Q86WR7 435 aaPredicted RBP18.05■□□□□ 0.48
ARID1A-208ENST00000532781 USHBP1Q8N6Y0 703 aa18.05■□□□□ 0.48
ARID1A-208ENST00000532781 MBIPQ9NS73 344 aa18.05■□□□□ 0.48
ARID1A-208ENST00000532781 PSME1Q06323 249 aa18.04■□□□□ 0.48
ARID1A-208ENST00000532781 RGPD1P0DJD0 1748 aa18.04■□□□□ 0.48
ARID1A-208ENST00000532781 NOB1Q9ULX3 412 aaKnown RBP18.04■□□□□ 0.48
ARID1A-208ENST00000532781 PDE3AQ14432 1141 aa18.03■□□□□ 0.48
ARID1A-208ENST00000532781 EYA1Q99502 592 aa18.03■□□□□ 0.48
ARID1A-208ENST00000532781 MIS18AQ9NYP9 233 aa18.03■□□□□ 0.48
ARID1A-208ENST00000532781 MSH5O43196 834 aa18.03■□□□□ 0.48
ARID1A-208ENST00000532781 TRIM27P14373 513 aa18.03■□□□□ 0.48
ARID1A-208ENST00000532781 RGS3P49796 1198 aa18.03■□□□□ 0.48
ARID1A-208ENST00000532781 FLT4P35916 1363 aa18.02■□□□□ 0.48
ARID1A-208ENST00000532781 STRCP1A6NGW2 1772 aa18.02■□□□□ 0.47
ARID1A-208ENST00000532781 IL16Q14005 1332 aa18.02■□□□□ 0.47
ARID1A-208ENST00000532781 NCBP3Q53F19 620 aaKnown RBP18.01■□□□□ 0.47
ARID1A-208ENST00000532781 C8orf58Q8NAV2 365 aa18.01■□□□□ 0.47
ARID1A-208ENST00000532781 PCDHB15Q9Y5E8 787 aa18.01■□□□□ 0.47
ARID1A-208ENST00000532781 SBNO1A3KN83 1393 aa18.01■□□□□ 0.47
ARID1A-208ENST00000532781 LTN1O94822 1766 aa18.01■□□□□ 0.47
ARID1A-208ENST00000532781 HOXC9P31274 260 aa18.01■□□□□ 0.47
ARID1A-208ENST00000532781 MTHFSDQ2M296 383 aaKnown RBP18■□□□□ 0.47
ARID1A-208ENST00000532781 ZKSCAN2Q63HK3 967 aa18■□□□□ 0.47
ARID1A-208ENST00000532781 FTSJ3Q8IY81 847 aaKnown RBP18■□□□□ 0.47
ARID1A-208ENST00000532781 CENPQQ7L2Z9 268 aaPredicted RBP17.99■□□□□ 0.47
ARID1A-208ENST00000532781 DZIP1LQ8IYY4 767 aaKnown RBP17.98■□□□□ 0.47
ARID1A-208ENST00000532781 RGPD2P0DJD1 1756 aa17.98■□□□□ 0.47
ARID1A-208ENST00000532781 VAMP4O75379 141 aa17.97■□□□□ 0.47
ARID1A-208ENST00000532781 NPM2Q86SE8 214 aaKnown RBP17.97■□□□□ 0.47
ARID1A-208ENST00000532781 ITPRIPQ8IWB1 547 aa17.97■□□□□ 0.47
ARID1A-208ENST00000532781 ZNF853P0CG23 659 aa17.97■□□□□ 0.47
ARID1A-208ENST00000532781 TMEM57Q8N5G2 664 aa17.96■□□□□ 0.47
ARID1A-208ENST00000532781 IFT57Q9NWB7 429 aa17.96■□□□□ 0.47
ARID1A-208ENST00000532781 PDE4AP27815 886 aa17.95■□□□□ 0.46
ARID1A-208ENST00000532781 GNAI1P63096 354 aa17.95■□□□□ 0.46
ARID1A-208ENST00000532781 MVPQ14764 893 aaKnown RBP17.95■□□□□ 0.46
ARID1A-208ENST00000532781 TWISTNBQ3B726 338 aaPredicted RBP17.95■□□□□ 0.46
ARID1A-208ENST00000532781 ATF7IPQ6VMQ6 1270 aa17.95■□□□□ 0.46
ARID1A-208ENST00000532781 LRRC59Q96AG4 307 aaKnown RBP17.95■□□□□ 0.46
ARID1A-208ENST00000532781 CFAP44Q96MT7 982 aa17.95■□□□□ 0.46
ARID1A-208ENST00000532781 IGSF1Q8N6C5 1336 aa17.94■□□□□ 0.46
ARID1A-208ENST00000532781 NWD1Q149M9 1564 aa17.94■□□□□ 0.46
ARID1A-208ENST00000532781 TMEM94Q12767 1356 aa17.94■□□□□ 0.46
ARID1A-208ENST00000532781 ARHGEF10O15013 1369 aa17.93■□□□□ 0.46
ARID1A-208ENST00000532781 PRKCSHP14314 528 aaPredicted RBP17.93■□□□□ 0.46
ARID1A-208ENST00000532781 KDM4FA0A1W2PPD8 638 aa17.92■□□□□ 0.46
ARID1A-208ENST00000532781 CT47B1P0C2W7 299 aaPredicted RBP17.91■□□□□ 0.46
ARID1A-208ENST00000532781 LMOD3Q0VAK6 560 aa17.91■□□□□ 0.46
ARID1A-208ENST00000532781 NFAT5O94916 1531 aa17.91■□□□□ 0.46
ARID1A-208ENST00000532781 NBPF6Q5VWK0 638 aa17.9■□□□□ 0.46
ARID1A-208ENST00000532781 KRT28Q7Z3Y7 464 aa17.9■□□□□ 0.46
ARID1A-208ENST00000532781 MRPL50Q8N5N7 158 aaKnown RBP17.9■□□□□ 0.46
ARID1A-208ENST00000532781 NBPF4Q96M43 638 aa17.9■□□□□ 0.46
ARID1A-208ENST00000532781 C1orf167Q5SNV9 1468 aa17.9■□□□□ 0.46
ARID1A-208ENST00000532781 C19orf44Q9H6X5 657 aa17.9■□□□□ 0.46
ARID1A-208ENST00000532781 C1orf115Q9H7X2 142 aa17.9■□□□□ 0.46
ARID1A-208ENST00000532781 KDRP35968 1356 aa17.9■□□□□ 0.46
ARID1A-208ENST00000532781 CALD1Q05682 793 aaKnown RBP17.89■□□□□ 0.46
ARID1A-208ENST00000532781 BACH2Q9BYV9 841 aa17.89■□□□□ 0.46
ARID1A-208ENST00000532781 CABLES1Q8TDN4 633 aa17.89■□□□□ 0.45
ARID1A-208ENST00000532781 USP54Q70EL1 1684 aa17.89■□□□□ 0.45
ARID1A-208ENST00000532781 GCP02774 474 aa17.88■□□□□ 0.45
ARID1A-208ENST00000532781 ZC3H6P61129 1189 aaKnown RBP17.88■□□□□ 0.45
ARID1A-208ENST00000532781 RGPD5Q99666 1765 aa17.88■□□□□ 0.45
ARID1A-208ENST00000532781 AXIN2Q9Y2T1 843 aa17.88■□□□□ 0.45
ARID1A-208ENST00000532781 CRB1P82279 1406 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms