RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 FAM184AQ8NB25 1140 aa9.94□□□□□ -0.82
CSDE1-214ENST00000530886 MROH2AA6NES4 1674 aa9.94□□□□□ -0.82
CSDE1-214ENST00000530886 PDS5BQ9NTI5 1447 aa9.94□□□□□ -0.82
CSDE1-214ENST00000530886 NRXN1Q9ULB1 1477 aa9.94□□□□□ -0.82
CSDE1-214ENST00000530886 MVPQ14764 893 aaKnown RBP9.94□□□□□ -0.82
CSDE1-214ENST00000530886 CARD14Q9BXL6 1004 aa9.94□□□□□ -0.82
CSDE1-214ENST00000530886 PTPRTO14522 1441 aa9.94□□□□□ -0.82
CSDE1-214ENST00000530886 MCTP1Q6DN14 999 aa9.94□□□□□ -0.82
CSDE1-214ENST00000530886 SYCP2Q9BX26 1530 aa9.93□□□□□ -0.82
CSDE1-214ENST00000530886 BMP2KLQ5H9B9 411 aa9.93□□□□□ -0.82
CSDE1-214ENST00000530886 TMEM63CQ9P1W3 806 aa9.93□□□□□ -0.82
CSDE1-214ENST00000530886 ARID3CA6NKF2 412 aa9.92□□□□□ -0.82
CSDE1-214ENST00000530886 TPM3P06753 285 aa9.92□□□□□ -0.82
CSDE1-214ENST00000530886 ANKRD36BQ8N2N9 1353 aa9.92□□□□□ -0.82
CSDE1-214ENST00000530886 RIOK3O14730 519 aaKnown RBP9.92□□□□□ -0.82
CSDE1-214ENST00000530886 COL3A1P02461 1466 aaPredicted RBP9.92□□□□□ -0.82
CSDE1-214ENST00000530886 PTMAP06454 111 aaKnown RBP9.92□□□□□ -0.82
CSDE1-214ENST00000530886 CHAF1AQ13111 956 aaPredicted RBP9.92□□□□□ -0.82
CSDE1-214ENST00000530886 QRICH2Q9H0J4 1663 aa9.92□□□□□ -0.82
CSDE1-214ENST00000530886 TSPY26PQ9H489 355 aa9.91□□□□□ -0.82
CSDE1-214ENST00000530886 RAD50Q92878 1312 aa9.91□□□□□ -0.82
CSDE1-214ENST00000530886 NCBP1Q09161 790 aaKnown RBP9.91□□□□□ -0.82
CSDE1-214ENST00000530886 TET3O43151 1660 aa9.91□□□□□ -0.82
CSDE1-214ENST00000530886 CD109Q6YHK3 1445 aa9.91□□□□□ -0.82
CSDE1-214ENST00000530886 WDR63Q8IWG1 891 aa9.91□□□□□ -0.82
CSDE1-214ENST00000530886 SETBP1Q9Y6X0 1596 aa9.91□□□□□ -0.82
CSDE1-214ENST00000530886 TCHHQ07283 1943 aa9.91□□□□□ -0.82
CSDE1-214ENST00000530886 SYCE3A1L190 88 aa9.9□□□□□ -0.82
CSDE1-214ENST00000530886 PSEN1P49768 467 aa9.9□□□□□ -0.82
CSDE1-214ENST00000530886 AXDND1Q5T1B0 1012 aaPredicted RBP9.9□□□□□ -0.82
CSDE1-214ENST00000530886 KIAA1524Q8TCG1 905 aa9.9□□□□□ -0.82
CSDE1-214ENST00000530886 KNSTRNQ9Y448 316 aa9.9□□□□□ -0.82
CSDE1-214ENST00000530886 ADGRB1O14514 1584 aa9.9□□□□□ -0.82
CSDE1-214ENST00000530886 CT47B1P0C2W7 299 aaPredicted RBP9.9□□□□□ -0.82
CSDE1-214ENST00000530886 NUCB1Q02818 461 aa9.9□□□□□ -0.82
CSDE1-214ENST00000530886 MYOM2P54296 1465 aa9.9□□□□□ -0.82
CSDE1-214ENST00000530886 RABEP1Q15276 862 aa9.9□□□□□ -0.83
CSDE1-214ENST00000530886 KIF18AQ8NI77 898 aa9.9□□□□□ -0.83
CSDE1-214ENST00000530886 IGSF3O75054 1194 aa9.89□□□□□ -0.83
CSDE1-214ENST00000530886 KRT222Q8N1A0 295 aa9.89□□□□□ -0.83
CSDE1-214ENST00000530886 SBNO2Q9Y2G9 1366 aa9.89□□□□□ -0.83
CSDE1-214ENST00000530886 CLGNO14967 610 aa9.89□□□□□ -0.83
CSDE1-214ENST00000530886 RBM27Q9P2N5 1060 aaKnown RBP9.89□□□□□ -0.83
CSDE1-214ENST00000530886 FEZ2Q9UHY8 353 aaPredicted RBP9.89□□□□□ -0.83
CSDE1-214ENST00000530886 ZDHHC9Q9Y397 364 aa9.89□□□□□ -0.83
CSDE1-214ENST00000530886 PHF14O94880 888 aa9.88□□□□□ -0.83
CSDE1-214ENST00000530886 SYAP1Q96A49 352 aaPredicted RBP9.88□□□□□ -0.83
CSDE1-214ENST00000530886 ZBTB40Q9NUA8 1239 aa9.88□□□□□ -0.83
CSDE1-214ENST00000530886 BCCIPQ9P287 314 aaKnown RBP eCLIP9.88□□□□□ -0.83
CSDE1-214ENST00000530886 ERCC6Q03468 1493 aa9.88□□□□□ -0.83
CSDE1-214ENST00000530886 PRPF40AO75400 957 aaKnown RBP9.88□□□□□ -0.83
CSDE1-214ENST00000530886 CFAP44Q96MT7 982 aa9.88□□□□□ -0.83
CSDE1-214ENST00000530886 CFAP65Q6ZU64 1925 aaKnown RBP9.88□□□□□ -0.83
CSDE1-214ENST00000530886 MROH1Q8NDA8 1641 aa9.88□□□□□ -0.83
CSDE1-214ENST00000530886 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.87□□□□□ -0.83
CSDE1-214ENST00000530886 TRIM6-TRIM34B2RNG4 842 aa9.87□□□□□ -0.83
CSDE1-214ENST00000530886 CTR9Q6PD62 1173 aa9.87□□□□□ -0.83
CSDE1-214ENST00000530886 TRIM34Q9BYJ4 488 aa9.87□□□□□ -0.83
CSDE1-214ENST00000530886 CDC42BPGQ6DT37 1551 aa9.87□□□□□ -0.83
CSDE1-214ENST00000530886 PPLO60437 1756 aa9.87□□□□□ -0.83
CSDE1-214ENST00000530886 PIK3R4Q99570 1358 aa9.87□□□□□ -0.83
CSDE1-214ENST00000530886 PPIP5K1Q6PFW1 1433 aa9.87□□□□□ -0.83
CSDE1-214ENST00000530886 KIF1BO60333 1816 aa9.87□□□□□ -0.83
CSDE1-214ENST00000530886 SMTNL1A8MU46 457 aa9.87□□□□□ -0.83
CSDE1-214ENST00000530886 SOX12O15370 315 aa9.86□□□□□ -0.83
CSDE1-214ENST00000530886 CYP2C19P33261 490 aa9.86□□□□□ -0.83
CSDE1-214ENST00000530886 RBM42Q9BTD8 480 aaKnown RBP9.86□□□□□ -0.83
CSDE1-214ENST00000530886 FAM177BA6PVY3 158 aa9.86□□□□□ -0.83
CSDE1-214ENST00000530886 TRIM27P14373 513 aa9.86□□□□□ -0.83
CSDE1-214ENST00000530886 PKP1Q13835 747 aa9.86□□□□□ -0.83
CSDE1-214ENST00000530886 SLFNL1Q499Z3 407 aa9.86□□□□□ -0.83
CSDE1-214ENST00000530886 ZKSCAN2Q63HK3 967 aa9.86□□□□□ -0.83
CSDE1-214ENST00000530886 DDX19BQ9UMR2 479 aa9.86□□□□□ -0.83
CSDE1-214ENST00000530886 USP25Q9UHP3 1055 aa9.86□□□□□ -0.83
CSDE1-214ENST00000530886 NSFL1CQ9UNZ2 370 aaKnown RBP9.86□□□□□ -0.83
CSDE1-214ENST00000530886 REC8O95072 547 aa9.85□□□□□ -0.83
CSDE1-214ENST00000530886 MUM1L1Q5H9M0 696 aa9.85□□□□□ -0.83
CSDE1-214ENST00000530886 DZIP1LQ8IYY4 767 aaKnown RBP9.85□□□□□ -0.83
CSDE1-214ENST00000530886 FOXD4L1Q9NU39 408 aa9.85□□□□□ -0.83
CSDE1-214ENST00000530886 NOP2P46087 812 aaKnown RBP9.85□□□□□ -0.83
CSDE1-214ENST00000530886 KIF1BPQ96EK5 621 aa9.85□□□□□ -0.83
CSDE1-214ENST00000530886 ARHGEF28Q8N1W1 1705 aaKnown RBP9.84□□□□□ -0.83
CSDE1-214ENST00000530886 ZNF622Q969S3 477 aaKnown RBP eCLIP9.84□□□□□ -0.83
CSDE1-214ENST00000530886 TTC12Q9H892 705 aaPredicted RBP9.84□□□□□ -0.83
CSDE1-214ENST00000530886 ATAD2Q6PL18 1390 aa9.84□□□□□ -0.83
CSDE1-214ENST00000530886 RUNDC1Q96C34 613 aa9.84□□□□□ -0.83
CSDE1-214ENST00000530886 PAXBP1Q9Y5B6 917 aa9.84□□□□□ -0.83
CSDE1-214ENST00000530886 DLG5Q8TDM6 1919 aa9.84□□□□□ -0.83
CSDE1-214ENST00000530886 ADCY5O95622 1261 aa9.84□□□□□ -0.83
CSDE1-214ENST00000530886 TBC1D9Q6ZT07 1266 aa9.84□□□□□ -0.83
CSDE1-214ENST00000530886 ZNF397Q8NF99 534 aaPredicted RBP9.84□□□□□ -0.83
CSDE1-214ENST00000530886 CHMP4AQ9BY43 222 aa9.84□□□□□ -0.83
CSDE1-214ENST00000530886 RGL3Q3MIN7 710 aa9.83□□□□□ -0.84
CSDE1-214ENST00000530886 CHD1LQ86WJ1 897 aa9.83□□□□□ -0.84
CSDE1-214ENST00000530886 PREX1Q8TCU6 1659 aa9.83□□□□□ -0.84
CSDE1-214ENST00000530886 HNRNPMP52272 730 aaKnown RBP eCLIP9.83□□□□□ -0.84
CSDE1-214ENST00000530886 TCP11L2Q8N4U5 519 aa9.83□□□□□ -0.84
CSDE1-214ENST00000530886 RNF214Q8ND24 703 aa9.83□□□□□ -0.84
CSDE1-214ENST00000530886 KCNF1Q9H3M0 494 aa9.83□□□□□ -0.84
CSDE1-214ENST00000530886 PLEKHF1Q96S99 279 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms