RNA–Protein interactions for RNA: ENST00000528235.5

CHKA-204, Transcript of choline kinase alpha, humanhuman

TSL 5

Gene CHKA, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-204ENST00000528235 RABGEF1Q9UJ41 708 aa8.59□□□□□ -1.03
CHKA-204ENST00000528235 SETBP1Q9Y6X0 1596 aa8.59□□□□□ -1.03
CHKA-204ENST00000528235 ERBINQ96RT1 1412 aa8.57□□□□□ -1.04
CHKA-204ENST00000528235 LRRC59Q96AG4 307 aaKnown RBP8.57□□□□□ -1.04
CHKA-204ENST00000528235 SLC52A1Q9NWF4 448 aa8.57□□□□□ -1.04
CHKA-204ENST00000528235 KIF15Q9NS87 1388 aa8.57□□□□□ -1.04
CHKA-204ENST00000528235 PLEKHG1Q9ULL1 1385 aa8.57□□□□□ -1.04
CHKA-204ENST00000528235 MYOM3Q5VTT5 1437 aa8.56□□□□□ -1.04
CHKA-204ENST00000528235 COL9A1P20849 921 aa8.56□□□□□ -1.04
CHKA-204ENST00000528235 C6orf132Q5T0Z8 1188 aa8.56□□□□□ -1.04
CHKA-204ENST00000528235 BRINP3Q76B58 766 aa8.56□□□□□ -1.04
CHKA-204ENST00000528235 RRP7BPQ9NSQ0 103 aa8.56□□□□□ -1.04
CHKA-204ENST00000528235 TBX22Q9Y458 520 aa8.56□□□□□ -1.04
CHKA-204ENST00000528235 MARF1Q9Y4F3 1742 aaKnown RBP8.55□□□□□ -1.04
CHKA-204ENST00000528235 ONECUT3O60422 494 aaPredicted RBP8.55□□□□□ -1.04
CHKA-204ENST00000528235 PROX2Q3B8N5 592 aa8.55□□□□□ -1.04
CHKA-204ENST00000528235 LAPTM4BQ86VI4 370 aa8.55□□□□□ -1.04
CHKA-204ENST00000528235 CCDC125Q86Z20 511 aa8.55□□□□□ -1.04
CHKA-204ENST00000528235 ANKK1Q8NFD2 765 aa8.55□□□□□ -1.04
CHKA-204ENST00000528235 WDR70Q9NW82 654 aa8.55□□□□□ -1.04
CHKA-204ENST00000528235 DAXXQ9UER7 740 aaPredicted RBP8.55□□□□□ -1.04
CHKA-204ENST00000528235 SETD5Q9C0A6 1442 aa8.54□□□□□ -1.04
CHKA-204ENST00000528235 RIMS2Q9UQ26 1411 aa8.54□□□□□ -1.04
CHKA-204ENST00000528235 LMTK2Q8IWU2 1503 aa8.54□□□□□ -1.04
CHKA-204ENST00000528235 ASXL1Q8IXJ9 1541 aa8.54□□□□□ -1.04
CHKA-204ENST00000528235 ADAMTS2O95450 1211 aa8.54□□□□□ -1.04
CHKA-204ENST00000528235 DDX12PQ92771 950 aa8.54□□□□□ -1.04
CHKA-204ENST00000528235 CFAP44Q96MT7 982 aa8.54□□□□□ -1.04
CHKA-204ENST00000528235 TMEM131LA2VDJ0 1609 aa8.54□□□□□ -1.04
CHKA-204ENST00000528235 TRPM2O94759 1503 aa8.54□□□□□ -1.04
CHKA-204ENST00000528235 NOS1P29475 1434 aa8.54□□□□□ -1.04
CHKA-204ENST00000528235 SPDYE16A6NNV3 312 aaPredicted RBP8.53□□□□□ -1.04
CHKA-204ENST00000528235 PAXIP1Q6ZW49 1069 aaPredicted RBP8.53□□□□□ -1.04
CHKA-204ENST00000528235 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.53□□□□□ -1.04
CHKA-204ENST00000528235 RTN4Q9NQC3 1192 aaKnown RBP8.53□□□□□ -1.04
CHKA-204ENST00000528235 USP21Q9UK80 565 aa8.53□□□□□ -1.04
CHKA-204ENST00000528235 TRPC5Q9UL62 973 aaPredicted RBP8.53□□□□□ -1.04
CHKA-204ENST00000528235 ZFYVE9O95405 1425 aa8.53□□□□□ -1.04
CHKA-204ENST00000528235 BRWD3Q6RI45 1802 aa8.52□□□□□ -1.04
CHKA-204ENST00000528235 PIK3R4Q99570 1358 aa8.52□□□□□ -1.05
CHKA-204ENST00000528235 LRP5O75197 1615 aa8.52□□□□□ -1.05
CHKA-204ENST00000528235 PDIA6Q15084 440 aa8.52□□□□□ -1.05
CHKA-204ENST00000528235 E2F4Q16254 413 aa8.52□□□□□ -1.05
CHKA-204ENST00000528235 IFFO2Q5TF58 517 aa8.52□□□□□ -1.05
CHKA-204ENST00000528235 KIAA1468Q9P260 1216 aa8.52□□□□□ -1.05
CHKA-204ENST00000528235 PTPN23Q9H3S7 1636 aa8.51□□□□□ -1.05
CHKA-204ENST00000528235 PNPLA6Q8IY17 1366 aa8.51□□□□□ -1.05
CHKA-204ENST00000528235 NBR1Q14596 966 aa8.51□□□□□ -1.05
CHKA-204ENST00000528235 AMOTL2Q9Y2J4 779 aa8.51□□□□□ -1.05
CHKA-204ENST00000528235 DCCP43146 1447 aa8.51□□□□□ -1.05
CHKA-204ENST00000528235 NALCNQ8IZF0 1738 aa8.51□□□□□ -1.05
CHKA-204ENST00000528235 EP400Q96L91 3159 aa8.51□□□□□ -1.05
CHKA-204ENST00000528235 RPRD2Q5VT52 1461 aaKnown RBP8.5□□□□□ -1.05
CHKA-204ENST00000528235 MST1RQ04912 1400 aa8.49□□□□□ -1.05
CHKA-204ENST00000528235 ADAMTS13Q76LX8 1427 aa8.49□□□□□ -1.05
CHKA-204ENST00000528235 TRIM6-TRIM34B2RNG4 842 aa8.49□□□□□ -1.05
CHKA-204ENST00000528235 MAP3K7O43318 606 aa8.49□□□□□ -1.05
CHKA-204ENST00000528235 EN1Q05925 392 aaPredicted RBP8.49□□□□□ -1.05
CHKA-204ENST00000528235 SF3B2Q13435 895 aaKnown RBP8.49□□□□□ -1.05
CHKA-204ENST00000528235 DDX17Q92841 729 aaKnown RBP8.49□□□□□ -1.05
CHKA-204ENST00000528235 CHIC2Q9UKJ5 165 aa8.49□□□□□ -1.05
CHKA-204ENST00000528235 XRN1Q8IZH2 1706 aaKnown RBP8.49□□□□□ -1.05
CHKA-204ENST00000528235 ANKRD30AQ9BXX3 1397 aa8.48□□□□□ -1.05
CHKA-204ENST00000528235 UNC13BO14795 1591 aa8.48□□□□□ -1.05
CHKA-204ENST00000528235 ABCC5O15440 1437 aa8.48□□□□□ -1.05
CHKA-204ENST00000528235 SOWAHBA6NEL2 793 aa8.48□□□□□ -1.05
CHKA-204ENST00000528235 NYAP1Q6ZVC0 841 aa8.48□□□□□ -1.05
CHKA-204ENST00000528235 ZFRQ96KR1 1074 aaKnown RBP8.48□□□□□ -1.05
CHKA-204ENST00000528235 DAPK1P53355 1430 aa8.47□□□□□ -1.05
CHKA-204ENST00000528235 E9PCH4 1651 aa8.47□□□□□ -1.05
CHKA-204ENST00000528235 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.47□□□□□ -1.05
CHKA-204ENST00000528235 RGS20O76081 388 aa8.47□□□□□ -1.05
CHKA-204ENST00000528235 PACS2Q86VP3 889 aa8.47□□□□□ -1.05
CHKA-204ENST00000528235 ARIH1Q9Y4X5 557 aaPredicted RBP8.47□□□□□ -1.05
CHKA-204ENST00000528235 LAMC1P11047 1609 aa8.47□□□□□ -1.05
CHKA-204ENST00000528235 COL22A1Q8NFW1 1626 aaPredicted RBP8.47□□□□□ -1.05
CHKA-204ENST00000528235 ATRNO75882 1429 aa8.46□□□□□ -1.05
CHKA-204ENST00000528235 PTCH1Q13635 1447 aa8.46□□□□□ -1.05
CHKA-204ENST00000528235 BCAMP50895 628 aa8.46□□□□□ -1.06
CHKA-204ENST00000528235 FAM98CQ17RN3 349 aaKnown RBP8.46□□□□□ -1.06
CHKA-204ENST00000528235 FNBP4Q8N3X1 1017 aaPredicted RBP8.46□□□□□ -1.06
CHKA-204ENST00000528235 SEPT9Q9UHD8 586 aaPredicted RBP8.46□□□□□ -1.06
CHKA-204ENST00000528235 SPHKAPQ2M3C7 1700 aa8.46□□□□□ -1.06
CHKA-204ENST00000528235 BLMP54132 1417 aaPredicted RBP8.46□□□□□ -1.06
CHKA-204ENST00000528235 PTPRUQ92729 1446 aa8.46□□□□□ -1.06
CHKA-204ENST00000528235 NRXN3Q9Y4C0 1643 aa8.44□□□□□ -1.06
CHKA-204ENST00000528235 TSR1Q2NL82 804 aaKnown RBP8.44□□□□□ -1.06
CHKA-204ENST00000528235 KANK4Q5T7N3 995 aaPredicted RBP8.44□□□□□ -1.06
CHKA-204ENST00000528235 DEFB132Q7Z7B7 95 aa8.44□□□□□ -1.06
CHKA-204ENST00000528235 GJD4Q96KN9 370 aaPredicted RBP8.44□□□□□ -1.06
CHKA-204ENST00000528235 ADGRL3Q9HAR2 1447 aa8.44□□□□□ -1.06
CHKA-204ENST00000528235 IQGAP3Q86VI3 1631 aa8.43□□□□□ -1.06
CHKA-204ENST00000528235 GRXCR2A6NFK2 248 aa8.43□□□□□ -1.06
CHKA-204ENST00000528235 LRCH3Q96II8 777 aa8.43□□□□□ -1.06
CHKA-204ENST00000528235 KIF1BO60333 1816 aa8.43□□□□□ -1.06
CHKA-204ENST00000528235 A0A0G2JS52 829 aa8.42□□□□□ -1.06
CHKA-204ENST00000528235 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.42□□□□□ -1.06
CHKA-204ENST00000528235 SOS2Q07890 1332 aaPredicted RBP8.42□□□□□ -1.06
CHKA-204ENST00000528235 VPS8Q8N3P4 1428 aa8.42□□□□□ -1.06
CHKA-204ENST00000528235 C1orf167Q5SNV9 1468 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms