RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 SCARF1Q14162 830 aa8.37□□□□□ -1.07
USP48-211ENST00000526044 SH3RF1Q7Z6J0 888 aa8.37□□□□□ -1.07
USP48-211ENST00000526044 FAM174AQ8TBP5 190 aa8.37□□□□□ -1.07
USP48-211ENST00000526044 C4orf48Q5BLP8 95 aa8.36□□□□□ -1.07
USP48-211ENST00000526044 ARHGAP9Q9BRR9 750 aa8.36□□□□□ -1.07
USP48-211ENST00000526044 MAGEB6P1A0A0J9YX57 407 aa8.35□□□□□ -1.07
USP48-211ENST00000526044 ZBTB33Q86T24 672 aa8.35□□□□□ -1.07
USP48-211ENST00000526044 ZFP42Q96MM3 310 aa8.35□□□□□ -1.07
USP48-211ENST00000526044 TBC1D2BQ9UPU7 963 aa8.35□□□□□ -1.07
USP48-211ENST00000526044 NACADO15069 1562 aa8.35□□□□□ -1.07
USP48-211ENST00000526044 DCAF1Q9Y4B6 1507 aa8.34□□□□□ -1.07
USP48-211ENST00000526044 MPNDQ8N594 471 aa8.34□□□□□ -1.07
USP48-211ENST00000526044 CARD14Q9BXL6 1004 aa8.34□□□□□ -1.07
USP48-211ENST00000526044 GDPD2Q9HCC8 539 aa8.34□□□□□ -1.07
USP48-211ENST00000526044 ZBBXA8MT70 800 aa8.33□□□□□ -1.08
USP48-211ENST00000526044 UBTFP17480 764 aaKnown RBP8.33□□□□□ -1.08
USP48-211ENST00000526044 C1QTNF2Q9BXJ5 285 aa8.33□□□□□ -1.08
USP48-211ENST00000526044 GTF3C3Q9Y5Q9 886 aa8.33□□□□□ -1.08
USP48-211ENST00000526044 RAD21O60216 631 aa8.32□□□□□ -1.08
USP48-211ENST00000526044 GPR37L1O60883 481 aa8.32□□□□□ -1.08
USP48-211ENST00000526044 LORP23490 312 aaPredicted RBP8.32□□□□□ -1.08
USP48-211ENST00000526044 ERFEQ4G0M1 354 aa8.32□□□□□ -1.08
USP48-211ENST00000526044 ADAM32Q8TC27 787 aa8.32□□□□□ -1.08
USP48-211ENST00000526044 OCSTAMPQ9BR26 566 aa8.32□□□□□ -1.08
USP48-211ENST00000526044 MYO15BQ96JP2 1530 aa8.32□□□□□ -1.08
USP48-211ENST00000526044 ERBB4Q15303 1308 aa8.31□□□□□ -1.08
USP48-211ENST00000526044 RB1CC1Q8TDY2 1594 aa8.31□□□□□ -1.08
USP48-211ENST00000526044 ABL2P42684 1182 aa8.31□□□□□ -1.08
USP48-211ENST00000526044 TRMT44Q8IYL2 757 aaKnown RBP8.31□□□□□ -1.08
USP48-211ENST00000526044 CDK15Q96Q40 435 aa8.31□□□□□ -1.08
USP48-211ENST00000526044 COG6Q9Y2V7 657 aa8.31□□□□□ -1.08
USP48-211ENST00000526044 FBXO45P0C2W1 286 aa8.3□□□□□ -1.08
USP48-211ENST00000526044 NR1H3Q13133 447 aa8.3□□□□□ -1.08
USP48-211ENST00000526044 ARID5BQ14865 1188 aa8.3□□□□□ -1.08
USP48-211ENST00000526044 MRPL14Q6P1L8 145 aaKnown RBP8.3□□□□□ -1.08
USP48-211ENST00000526044 NNTQ13423 1086 aa8.29□□□□□ -1.08
USP48-211ENST00000526044 SLC10A4Q96EP9 437 aa8.29□□□□□ -1.08
USP48-211ENST00000526044 CDV3Q9UKY7 258 aaKnown RBP8.29□□□□□ -1.08
USP48-211ENST00000526044 ZNF330Q9Y3S2 320 aaPredicted RBP8.29□□□□□ -1.08
USP48-211ENST00000526044 TLL2Q9Y6L7 1015 aa8.29□□□□□ -1.08
USP48-211ENST00000526044 ADH1CP00326 375 aa8.28□□□□□ -1.08
USP48-211ENST00000526044 IRF5Q13568 498 aa8.28□□□□□ -1.08
USP48-211ENST00000526044 DZIP3Q86Y13 1208 aaKnown RBP8.28□□□□□ -1.08
USP48-211ENST00000526044 WWC1Q8IX03 1113 aa8.28□□□□□ -1.08
USP48-211ENST00000526044 PURBQ96QR8 312 aaKnown RBP8.28□□□□□ -1.08
USP48-211ENST00000526044 MAP4K5Q9Y4K4 846 aa8.28□□□□□ -1.08
USP48-211ENST00000526044 LOC100996750A0A140TA64 210 aa8.27□□□□□ -1.09
USP48-211ENST00000526044 WDR4P57081 412 aaKnown RBP8.27□□□□□ -1.09
USP48-211ENST00000526044 WASHC4Q2M389 1173 aa8.27□□□□□ -1.09
USP48-211ENST00000526044 VASH1Q7L8A9 365 aaPredicted RBP8.27□□□□□ -1.09
USP48-211ENST00000526044 ZNF592Q92610 1267 aa8.27□□□□□ -1.09
USP48-211ENST00000526044 POM121Q96HA1 1249 aa8.27□□□□□ -1.09
USP48-211ENST00000526044 KRTAP4-6Q9BYQ5 205 aa8.27□□□□□ -1.09
USP48-211ENST00000526044 GRM5P41594 1212 aa8.26□□□□□ -1.09
USP48-211ENST00000526044 MCCD1P59942 119 aaPredicted RBP8.26□□□□□ -1.09
USP48-211ENST00000526044 NR5A1Q13285 461 aa8.25□□□□□ -1.09
USP48-211ENST00000526044 PCDHB9Q9Y5E1 797 aa8.25□□□□□ -1.09
USP48-211ENST00000526044 MAN1A2O60476 641 aa8.24□□□□□ -1.09
USP48-211ENST00000526044 VSIG8P0DPA2 414 aa8.24□□□□□ -1.09
USP48-211ENST00000526044 TIMP2P16035 220 aa8.24□□□□□ -1.09
USP48-211ENST00000526044 EIF4G2P78344 907 aaKnown RBP eCLIP8.24□□□□□ -1.09
USP48-211ENST00000526044 VAC14Q08AM6 782 aa8.24□□□□□ -1.09
USP48-211ENST00000526044 NBPF20Q3BBV1 942 aa8.24□□□□□ -1.09
USP48-211ENST00000526044 KCTD15Q96SI1 283 aaPredicted RBP8.24□□□□□ -1.09
USP48-211ENST00000526044 UPP2O95045 317 aa8.23□□□□□ -1.09
USP48-211ENST00000526044 KCNMA1Q12791 1236 aa8.23□□□□□ -1.09
USP48-211ENST00000526044 SUZ12Q15022 739 aaKnown RBP8.23□□□□□ -1.09
USP48-211ENST00000526044 CLUAP1Q96AJ1 413 aa8.23□□□□□ -1.09
USP48-211ENST00000526044 SOBPA7XYQ1 873 aa8.22□□□□□ -1.09
USP48-211ENST00000526044 FSHRP23945 695 aa8.22□□□□□ -1.09
USP48-211ENST00000526044 A6NJR5 290 aa8.21□□□□□ -1.1
USP48-211ENST00000526044 NR3C2P08235 984 aa8.2□□□□□ -1.1
USP48-211ENST00000526044 SOX11P35716 441 aa8.2□□□□□ -1.1
USP48-211ENST00000526044 CCDC116Q8IYX3 515 aa8.2□□□□□ -1.1
USP48-211ENST00000526044 ESPNB1AK53 854 aa8.19□□□□□ -1.1
USP48-211ENST00000526044 RNF225M0QZC1 329 aaPredicted RBP8.19□□□□□ -1.1
USP48-211ENST00000526044 ZIC2O95409 532 aaPredicted RBP8.19□□□□□ -1.1
USP48-211ENST00000526044 DHX9Q08211 1270 aaKnown RBP8.19□□□□□ -1.1
USP48-211ENST00000526044 C6orf118Q5T5N4 469 aa8.19□□□□□ -1.1
USP48-211ENST00000526044 PROSER2Q86WR7 435 aaPredicted RBP8.19□□□□□ -1.1
USP48-211ENST00000526044 SEPT12Q8IYM1 358 aa8.19□□□□□ -1.1
USP48-211ENST00000526044 KCTD17Q8N5Z5 321 aa8.19□□□□□ -1.1
USP48-211ENST00000526044 GIGYF1O75420 1035 aaPredicted RBP8.18□□□□□ -1.1
USP48-211ENST00000526044 SEMA3FQ13275 785 aa8.18□□□□□ -1.1
USP48-211ENST00000526044 INTS6LQ5JSJ4 861 aaKnown RBP8.18□□□□□ -1.1
USP48-211ENST00000526044 RNF20Q5VTR2 975 aa8.18□□□□□ -1.1
USP48-211ENST00000526044 CCDC125Q86Z20 511 aa8.18□□□□□ -1.1
USP48-211ENST00000526044 FNBP4Q8N3X1 1017 aaPredicted RBP8.18□□□□□ -1.1
USP48-211ENST00000526044 TMEM151AQ8N4L1 468 aa8.18□□□□□ -1.1
USP48-211ENST00000526044 CEP126Q9P2H0 1117 aa8.18□□□□□ -1.1
USP48-211ENST00000526044 EMILIN1Q9Y6C2 1016 aa8.18□□□□□ -1.1
USP48-211ENST00000526044 PPFIA3O75145 1194 aa8.17□□□□□ -1.1
USP48-211ENST00000526044 BMP2P12643 396 aa8.17□□□□□ -1.1
USP48-211ENST00000526044 PPP1R26Q5T8A7 1209 aaPredicted RBP8.17□□□□□ -1.1
USP48-211ENST00000526044 KLF16Q9BXK1 252 aaPredicted RBP8.17□□□□□ -1.1
USP48-211ENST00000526044 RAB15P59190 212 aa8.16□□□□□ -1.1
USP48-211ENST00000526044 TRIM52Q96A61 297 aa8.16□□□□□ -1.1
USP48-211ENST00000526044 PGPEP1Q9NXJ5 209 aa8.16□□□□□ -1.1
USP48-211ENST00000526044 GDF11O95390 407 aa8.15□□□□□ -1.1
USP48-211ENST00000526044 ITPKCQ96DU7 683 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms