RNA–Protein interactions for RNA: ENST00000524815.5

PACS1-203, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4 BASIC

Gene PACS1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-203ENST00000524815 TOM1L2Q6ZVM7 507 aa21.69■■□□□ 1.06
PACS1-203ENST00000524815 AXIN2Q9Y2T1 843 aa21.69■■□□□ 1.06
PACS1-203ENST00000524815 BRD4O60885 1362 aaPredicted RBP21.69■■□□□ 1.06
PACS1-203ENST00000524815 SLIT3O75094 1523 aa21.69■■□□□ 1.06
PACS1-203ENST00000524815 ZNF784Q8NCA9 323 aaPredicted RBP21.68■■□□□ 1.06
PACS1-203ENST00000524815 BCL9O00512 1426 aa21.68■■□□□ 1.06
PACS1-203ENST00000524815 COL18A1P39060 1754 aa21.67■■□□□ 1.06
PACS1-203ENST00000524815 ATF5Q9Y2D1 282 aaPredicted RBP21.67■■□□□ 1.06
PACS1-203ENST00000524815 MYOM1P52179 1685 aa21.66■■□□□ 1.06
PACS1-203ENST00000524815 USP6P35125 1406 aa21.66■■□□□ 1.06
PACS1-203ENST00000524815 CABP1Q9NZU7 370 aa21.66■■□□□ 1.06
PACS1-203ENST00000524815 KIAA1210Q9ULL0 1709 aa21.66■■□□□ 1.06
PACS1-203ENST00000524815 WDR17Q8IZU2 1322 aa21.65■■□□□ 1.06
PACS1-203ENST00000524815 TXNRD1Q16881 649 aa21.64■■□□□ 1.05
PACS1-203ENST00000524815 CENPJQ9HC77 1338 aaPredicted RBP21.63■■□□□ 1.05
PACS1-203ENST00000524815 SLC15A2Q16348 729 aa21.63■■□□□ 1.05
PACS1-203ENST00000524815 SYT17Q9BSW7 474 aa21.63■■□□□ 1.05
PACS1-203ENST00000524815 CDCA7Q9BWT1 371 aaPredicted RBP21.63■■□□□ 1.05
PACS1-203ENST00000524815 FHDC1Q9C0D6 1143 aaPredicted RBP21.63■■□□□ 1.05
PACS1-203ENST00000524815 WNK3Q9BYP7 1800 aa21.62■■□□□ 1.05
PACS1-203ENST00000524815 STK32BQ9NY57 414 aa21.62■■□□□ 1.05
PACS1-203ENST00000524815 ARHGEF25Q86VW2 580 aa21.61■■□□□ 1.05
PACS1-203ENST00000524815 SGIP1Q9BQI5 828 aa21.61■■□□□ 1.05
PACS1-203ENST00000524815 CARD10Q9BWT7 1032 aa21.6■■□□□ 1.05
PACS1-203ENST00000524815 PIK3C2AO00443 1686 aa21.6■■□□□ 1.05
PACS1-203ENST00000524815 CPSF1Q10570 1443 aaKnown RBP21.59■■□□□ 1.05
PACS1-203ENST00000524815 MTFR1LQ9H019 292 aa21.58■■□□□ 1.05
PACS1-203ENST00000524815 AKAP12Q02952 1782 aa21.58■■□□□ 1.04
PACS1-203ENST00000524815 EXOC5O00471 708 aa21.57■■□□□ 1.04
PACS1-203ENST00000524815 RGPD5Q99666 1765 aa21.55■■□□□ 1.04
PACS1-203ENST00000524815 QRICH2Q9H0J4 1663 aa21.54■■□□□ 1.04
PACS1-203ENST00000524815 CSB-PGBD3P0DP91 1061 aa21.54■■□□□ 1.04
PACS1-203ENST00000524815 KCNH5Q8NCM2 988 aa21.54■■□□□ 1.04
PACS1-203ENST00000524815 TTC21BQ7Z4L5 1316 aa21.54■■□□□ 1.04
PACS1-203ENST00000524815 SOX12O15370 315 aa21.53■■□□□ 1.04
PACS1-203ENST00000524815 C1QTNF8P60827 252 aa21.52■■□□□ 1.04
PACS1-203ENST00000524815 SENP3-EIF4A1A0A087X0R7 540 aa21.51■■□□□ 1.03
PACS1-203ENST00000524815 ARXQ96QS3 562 aa21.51■■□□□ 1.03
PACS1-203ENST00000524815 CCDC7Q96M83 1385 aa21.5■■□□□ 1.03
PACS1-203ENST00000524815 TNS2Q63HR2 1409 aa21.5■■□□□ 1.03
PACS1-203ENST00000524815 ACSBG1Q96GR2 724 aa21.5■■□□□ 1.03
PACS1-203ENST00000524815 ZNF692Q9BU19 519 aaPredicted RBP21.5■■□□□ 1.03
PACS1-203ENST00000524815 EVC2Q86UK5 1308 aa21.5■■□□□ 1.03
PACS1-203ENST00000524815 NFAT5O94916 1531 aa21.5■■□□□ 1.03
PACS1-203ENST00000524815 CHD4Q14839 1912 aa21.49■■□□□ 1.03
PACS1-203ENST00000524815 TRPM1Q7Z4N2 1603 aa21.49■■□□□ 1.03
PACS1-203ENST00000524815 MAP3K5Q99683 1374 aa21.48■■□□□ 1.03
PACS1-203ENST00000524815 NHSQ6T4R5 1651 aa21.48■■□□□ 1.03
PACS1-203ENST00000524815 PAPPAQ13219 1627 aa21.47■■□□□ 1.03
PACS1-203ENST00000524815 TTC21AQ8NDW8 1320 aa21.47■■□□□ 1.03
PACS1-203ENST00000524815 ZNF827Q17R98 1081 aa21.46■■□□□ 1.03
PACS1-203ENST00000524815 LRRC4BQ9NT99 713 aa21.45■■□□□ 1.02
PACS1-203ENST00000524815 ABCC6O95255 1503 aa21.44■■□□□ 1.02
PACS1-203ENST00000524815 ERBB3P21860 1342 aa21.42■■□□□ 1.02
PACS1-203ENST00000524815 GPR162Q16538 588 aa21.42■■□□□ 1.02
PACS1-203ENST00000524815 AKT1S1Q96B36 256 aa21.41■■□□□ 1.02
PACS1-203ENST00000524815 NLRP2Q9NX02 1062 aa21.41■■□□□ 1.02
PACS1-203ENST00000524815 KTN1Q86UP2 1357 aaKnown RBP21.4■■□□□ 1.02
PACS1-203ENST00000524815 IL2RBP14784 551 aa21.4■■□□□ 1.02
PACS1-203ENST00000524815 BTAF1O14981 1849 aa21.4■■□□□ 1.02
PACS1-203ENST00000524815 USP31Q70CQ4 1352 aa21.38■■□□□ 1.01
PACS1-203ENST00000524815 L3MBTL2Q969R5 705 aa21.38■■□□□ 1.01
PACS1-203ENST00000524815 GOLGB1Q14789 3259 aaKnown RBP21.36■■□□□ 1.01
PACS1-203ENST00000524815 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.36■■□□□ 1.01
PACS1-203ENST00000524815 SLC16A10Q8TF71 515 aa21.36■■□□□ 1.01
PACS1-203ENST00000524815 PNPLA7Q6ZV29 1317 aa21.35■■□□□ 1.01
PACS1-203ENST00000524815 GIGYF1O75420 1035 aaPredicted RBP21.35■■□□□ 1.01
PACS1-203ENST00000524815 ANKRD24Q8TF21 1146 aa21.35■■□□□ 1.01
PACS1-203ENST00000524815 SLC27A3Q5K4L6 730 aa21.34■■□□□ 1.01
PACS1-203ENST00000524815 NME9Q86XW9 330 aa21.34■■□□□ 1.01
PACS1-203ENST00000524815 KLHL34Q8N239 644 aa21.34■■□□□ 1.01
PACS1-203ENST00000524815 COL24A1Q17RW2 1714 aa21.33■■□□□ 1.01
PACS1-203ENST00000524815 MON2Q7Z3U7 1717 aa21.32■■□□□ 1
PACS1-203ENST00000524815 POLD1P28340 1107 aa21.32■■□□□ 1
PACS1-203ENST00000524815 IFFO2Q5TF58 517 aa21.32■■□□□ 1
PACS1-203ENST00000524815 PELP1Q8IZL8 1130 aaKnown RBP21.32■■□□□ 1
PACS1-203ENST00000524815 NLGN2Q8NFZ4 835 aa21.32■■□□□ 1
PACS1-203ENST00000524815 USP54Q70EL1 1684 aa21.31■■□□□ 1
PACS1-203ENST00000524815 KCNQ4P56696 695 aa21.31■■□□□ 1
PACS1-203ENST00000524815 KAT6BQ8WYB5 2073 aa21.31■■□□□ 1
PACS1-203ENST00000524815 QSER1Q2KHR3 1735 aa21.31■■□□□ 1
PACS1-203ENST00000524815 SBNO2Q9Y2G9 1366 aa21.31■■□□□ 1
PACS1-203ENST00000524815 CD163L1Q9NR16 1453 aa21.31■■□□□ 1
PACS1-203ENST00000524815 DDX54Q8TDD1 881 aaKnown RBP21.3■■□□□ 1
PACS1-203ENST00000524815 ROCK2O75116 1388 aaKnown RBP21.3■■□□□ 1
PACS1-203ENST00000524815 LTN1O94822 1766 aa21.3■■□□□ 1
PACS1-203ENST00000524815 SHANK3Q9BYB0 1731 aa21.29■■□□□ 1
PACS1-203ENST00000524815 TFCP2L1Q9NZI6 479 aa21.29■■□□□ 1
PACS1-203ENST00000524815 YBX3P16989 372 aaKnown RBP eCLIP21.27■■□□□ 1
PACS1-203ENST00000524815 PRIM1P49642 420 aaKnown RBP21.26■□□□□ 0.99
PACS1-203ENST00000524815 TUBGCP6Q96RT7 1819 aa21.26■□□□□ 0.99
PACS1-203ENST00000524815 CEP350Q5VT06 3117 aa21.25■□□□□ 0.99
PACS1-203ENST00000524815 SIN3AQ96ST3 1273 aa21.25■□□□□ 0.99
PACS1-203ENST00000524815 NSD2O96028 1365 aa21.24■□□□□ 0.99
PACS1-203ENST00000524815 IP6K1Q92551 441 aa21.24■□□□□ 0.99
PACS1-203ENST00000524815 SYTL4Q96C24 671 aaPredicted RBP21.23■□□□□ 0.99
PACS1-203ENST00000524815 SLC12A5Q9H2X9 1139 aa21.23■□□□□ 0.99
PACS1-203ENST00000524815 ANKRD36BQ8N2N9 1353 aa21.23■□□□□ 0.99
PACS1-203ENST00000524815 GRIN3BO60391 1043 aa21.22■□□□□ 0.99
PACS1-203ENST00000524815 TMC1Q8TDI8 760 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms