RNA–Protein interactions for RNA: ENST00000524602.5

CHD7-202, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 1 (best) BASIC

Gene CHD7, Length 3,456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-202ENST00000524602 PRKAR2BP31323 418 aa10.46□□□□□ -0.73
CHD7-202ENST00000524602 GNAI1P63096 354 aa10.46□□□□□ -0.73
CHD7-202ENST00000524602 LMOD3Q0VAK6 560 aa10.46□□□□□ -0.73
CHD7-202ENST00000524602 WAPLQ7Z5K2 1190 aa10.46□□□□□ -0.73
CHD7-202ENST00000524602 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.46□□□□□ -0.73
CHD7-202ENST00000524602 AKAP12Q02952 1782 aa10.46□□□□□ -0.74
CHD7-202ENST00000524602 SIRT1Q96EB6 747 aa10.46□□□□□ -0.74
CHD7-202ENST00000524602 METP08581 1390 aa10.46□□□□□ -0.74
CHD7-202ENST00000524602 C3P01024 1663 aa10.45□□□□□ -0.74
CHD7-202ENST00000524602 TRHP20396 242 aaPredicted RBP10.45□□□□□ -0.74
CHD7-202ENST00000524602 SLKQ9H2G2 1235 aaPredicted RBP10.45□□□□□ -0.74
CHD7-202ENST00000524602 KCNA4P22459 653 aa10.45□□□□□ -0.74
CHD7-202ENST00000524602 CEBPAP49715 358 aaPredicted RBP10.45□□□□□ -0.74
CHD7-202ENST00000524602 GCC1Q96CN9 775 aa10.45□□□□□ -0.74
CHD7-202ENST00000524602 ITSN1Q15811 1721 aa10.45□□□□□ -0.74
CHD7-202ENST00000524602 FER1L4A9Z1Z3 1794 aa10.45□□□□□ -0.74
CHD7-202ENST00000524602 TECPR2O15040 1411 aa10.45□□□□□ -0.74
CHD7-202ENST00000524602 PLEKHG5O94827 1062 aa10.45□□□□□ -0.74
CHD7-202ENST00000524602 TMEM2Q9UHN6 1383 aa10.44□□□□□ -0.74
CHD7-202ENST00000524602 KIF24Q5T7B8 1368 aa10.44□□□□□ -0.74
CHD7-202ENST00000524602 DLG5Q8TDM6 1919 aa10.44□□□□□ -0.74
CHD7-202ENST00000524602 CPS1P31327 1500 aa10.44□□□□□ -0.74
CHD7-202ENST00000524602 TULP1O00294 542 aaPredicted RBP10.44□□□□□ -0.74
CHD7-202ENST00000524602 ZNF853P0CG23 659 aa10.44□□□□□ -0.74
CHD7-202ENST00000524602 RBM25P49756 843 aaKnown RBP10.44□□□□□ -0.74
CHD7-202ENST00000524602 NRKQ7Z2Y5 1582 aa10.44□□□□□ -0.74
CHD7-202ENST00000524602 WASLO00401 505 aaPredicted RBP10.43□□□□□ -0.74
CHD7-202ENST00000524602 IL13P35225 146 aa10.43□□□□□ -0.74
CHD7-202ENST00000524602 BMP2KLQ5H9B9 411 aa10.43□□□□□ -0.74
CHD7-202ENST00000524602 CHD1LQ86WJ1 897 aa10.43□□□□□ -0.74
CHD7-202ENST00000524602 VAMP4O75379 141 aa10.43□□□□□ -0.74
CHD7-202ENST00000524602 MFAP1P55081 439 aaKnown RBP10.43□□□□□ -0.74
CHD7-202ENST00000524602 L1TD1Q5T7N2 865 aaKnown RBP10.43□□□□□ -0.74
CHD7-202ENST00000524602 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.43□□□□□ -0.74
CHD7-202ENST00000524602 MRPL50Q8N5N7 158 aaKnown RBP10.43□□□□□ -0.74
CHD7-202ENST00000524602 CHMP5Q9NZZ3 219 aa10.43□□□□□ -0.74
CHD7-202ENST00000524602 ZBTB7BO15156 539 aaPredicted RBP10.42□□□□□ -0.74
CHD7-202ENST00000524602 HDGFP51858 240 aaKnown RBP10.42□□□□□ -0.74
CHD7-202ENST00000524602 SNX21Q969T3 373 aa10.42□□□□□ -0.74
CHD7-202ENST00000524602 NCOA3Q9Y6Q9 1424 aa10.42□□□□□ -0.74
CHD7-202ENST00000524602 ABCC4O15439 1325 aa10.42□□□□□ -0.74
CHD7-202ENST00000524602 HSCBQ8IWL3 235 aa10.42□□□□□ -0.74
CHD7-202ENST00000524602 TXNDC2Q86VQ3 553 aa10.42□□□□□ -0.74
CHD7-202ENST00000524602 CFAP44Q96MT7 982 aa10.41□□□□□ -0.74
CHD7-202ENST00000524602 HAP1P54257 671 aaPredicted RBP10.41□□□□□ -0.74
CHD7-202ENST00000524602 PHACTR3Q96KR7 559 aa10.41□□□□□ -0.74
CHD7-202ENST00000524602 COG3Q96JB2 828 aa10.41□□□□□ -0.74
CHD7-202ENST00000524602 ZNF692Q9BU19 519 aaPredicted RBP10.41□□□□□ -0.74
CHD7-202ENST00000524602 API5Q9BZZ5 524 aaKnown RBP10.41□□□□□ -0.74
CHD7-202ENST00000524602 LTKP29376 864 aa10.4□□□□□ -0.74
CHD7-202ENST00000524602 ADAMTS13Q76LX8 1427 aa10.4□□□□□ -0.74
CHD7-202ENST00000524602 MBIPQ9NS73 344 aa10.4□□□□□ -0.74
CHD7-202ENST00000524602 MCM4P33991 863 aa10.39□□□□□ -0.75
CHD7-202ENST00000524602 EMILIN1Q9Y6C2 1016 aa10.39□□□□□ -0.75
CHD7-202ENST00000524602 CCDC61Q9Y6R9 512 aa10.39□□□□□ -0.75
CHD7-202ENST00000524602 HMOX1P09601 288 aa10.39□□□□□ -0.75
CHD7-202ENST00000524602 LNPKQ9C0E8 428 aa10.39□□□□□ -0.75
CHD7-202ENST00000524602 TWISTNBQ3B726 338 aaPredicted RBP10.39□□□□□ -0.75
CHD7-202ENST00000524602 NUDT16Q96DE0 195 aaKnown RBP10.39□□□□□ -0.75
CHD7-202ENST00000524602 CIZ1Q9ULV3 898 aaPredicted RBP10.39□□□□□ -0.75
CHD7-202ENST00000524602 TOPAZ1Q8N9V7 1692 aa10.38□□□□□ -0.75
CHD7-202ENST00000524602 NME9Q86XW9 330 aa10.38□□□□□ -0.75
CHD7-202ENST00000524602 VSIG10Q8N0Z9 540 aa10.38□□□□□ -0.75
CHD7-202ENST00000524602 PLEKHG1Q9ULL1 1385 aa10.38□□□□□ -0.75
CHD7-202ENST00000524602 DDX11L8A8MPP1 907 aa10.38□□□□□ -0.75
CHD7-202ENST00000524602 KLHL34Q8N239 644 aa10.38□□□□□ -0.75
CHD7-202ENST00000524602 FAM43AQ8N2R8 423 aa10.38□□□□□ -0.75
CHD7-202ENST00000524602 DDIT3P35638 169 aa10.38□□□□□ -0.75
CHD7-202ENST00000524602 NALCNQ8IZF0 1738 aa10.38□□□□□ -0.75
CHD7-202ENST00000524602 ROBO2Q9HCK4 1378 aa10.37□□□□□ -0.75
CHD7-202ENST00000524602 ANKRD45Q5TZF3 282 aa10.37□□□□□ -0.75
CHD7-202ENST00000524602 TSPYL6Q8N831 410 aa10.37□□□□□ -0.75
CHD7-202ENST00000524602 PTMSP20962 102 aa10.37□□□□□ -0.75
CHD7-202ENST00000524602 SLIT1O75093 1534 aa10.36□□□□□ -0.75
CHD7-202ENST00000524602 ISY1Q9ULR0 285 aaKnown RBP10.36□□□□□ -0.75
CHD7-202ENST00000524602 THUMPD2Q9BTF0 503 aaKnown RBP10.36□□□□□ -0.75
CHD7-202ENST00000524602 RGPD1P0DJD0 1748 aa10.36□□□□□ -0.75
CHD7-202ENST00000524602 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.36□□□□□ -0.75
CHD7-202ENST00000524602 KIAA0232Q92628 1395 aa10.36□□□□□ -0.75
CHD7-202ENST00000524602 NCKAP5LQ9HCH0 1330 aa10.36□□□□□ -0.75
CHD7-202ENST00000524602 ARHGAP23Q9P227 1491 aa10.36□□□□□ -0.75
CHD7-202ENST00000524602 FBLN1P23142 703 aa10.35□□□□□ -0.75
CHD7-202ENST00000524602 SLC26A8Q96RN1 970 aa10.35□□□□□ -0.75
CHD7-202ENST00000524602 FSD2A1L4K1 749 aa10.35□□□□□ -0.75
CHD7-202ENST00000524602 INTS3Q68E01 1043 aaKnown RBP10.35□□□□□ -0.75
CHD7-202ENST00000524602 ARXQ96QS3 562 aa10.35□□□□□ -0.75
CHD7-202ENST00000524602 EID1Q9Y6B2 187 aa10.35□□□□□ -0.75
CHD7-202ENST00000524602 SIRT2Q8IXJ6 389 aa10.35□□□□□ -0.75
CHD7-202ENST00000524602 GOLGA6L3A6NEY3 463 aa10.34□□□□□ -0.75
CHD7-202ENST00000524602 C8orf58Q8NAV2 365 aa10.34□□□□□ -0.75
CHD7-202ENST00000524602 OVOS2A0A0J9YW53 1432 aa10.34□□□□□ -0.75
CHD7-202ENST00000524602 OVOS2Q6IE36 1432 aa10.34□□□□□ -0.75
CHD7-202ENST00000524602 PTPRUQ92729 1446 aa10.34□□□□□ -0.75
CHD7-202ENST00000524602 CDC45O75419 566 aa10.34□□□□□ -0.75
CHD7-202ENST00000524602 AEBP2Q6ZN18 517 aaPredicted RBP10.34□□□□□ -0.75
CHD7-202ENST00000524602 RIMS1Q86UR5 1692 aaKnown RBP10.34□□□□□ -0.75
CHD7-202ENST00000524602 TBC1D9Q6ZT07 1266 aa10.34□□□□□ -0.75
CHD7-202ENST00000524602 PTPRCP08575 1304 aa10.33□□□□□ -0.76
CHD7-202ENST00000524602 TRAK2O60296 914 aa10.33□□□□□ -0.76
CHD7-202ENST00000524602 SPRYD3Q8NCJ5 442 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms