RNA–Protein interactions for RNA: ENST00000524523.1

CTR9-202, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene CTR9, Length 902 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-202ENST00000524523 CAMSAP1Q5T5Y3 1602 aa10.26□□□□□ -0.77
CTR9-202ENST00000524523 COL17A1Q9UMD9 1497 aaPredicted RBP10.26□□□□□ -0.77
CTR9-202ENST00000524523 ONECUT3O60422 494 aaPredicted RBP10.26□□□□□ -0.77
CTR9-202ENST00000524523 PROX2Q3B8N5 592 aa10.26□□□□□ -0.77
CTR9-202ENST00000524523 RNF166Q96A37 237 aaPredicted RBP10.26□□□□□ -0.77
CTR9-202ENST00000524523 NBPF3Q9H094 633 aa10.26□□□□□ -0.77
CTR9-202ENST00000524523 RABGEF1Q9UJ41 708 aa10.26□□□□□ -0.77
CTR9-202ENST00000524523 PER1O15534 1290 aaPredicted RBP10.25□□□□□ -0.77
CTR9-202ENST00000524523 IDI1Q13907 227 aa10.25□□□□□ -0.77
CTR9-202ENST00000524523 YTHDC1Q96MU7 727 aaKnown RBP10.25□□□□□ -0.77
CTR9-202ENST00000524523 PIK3C2GO75747 1445 aa10.24□□□□□ -0.77
CTR9-202ENST00000524523 TRIM6-TRIM34B2RNG4 842 aa10.24□□□□□ -0.77
CTR9-202ENST00000524523 ADGRF5Q8IZF2 1346 aa10.24□□□□□ -0.77
CTR9-202ENST00000524523 NPC1L1Q9UHC9 1359 aa10.24□□□□□ -0.77
CTR9-202ENST00000524523 BHMG1C9JSJ3 638 aaPredicted RBP10.23□□□□□ -0.77
CTR9-202ENST00000524523 TULP1O00294 542 aaPredicted RBP10.23□□□□□ -0.77
CTR9-202ENST00000524523 HDGFP51858 240 aaKnown RBP10.23□□□□□ -0.77
CTR9-202ENST00000524523 MRPL50Q8N5N7 158 aaKnown RBP10.23□□□□□ -0.77
CTR9-202ENST00000524523 CDHR5Q9HBB8 845 aa10.23□□□□□ -0.77
CTR9-202ENST00000524523 KIAA1468Q9P260 1216 aa10.23□□□□□ -0.77
CTR9-202ENST00000524523 INSRP06213 1382 aa10.23□□□□□ -0.77
CTR9-202ENST00000524523 ARHGEF40Q8TER5 1519 aa10.23□□□□□ -0.77
CTR9-202ENST00000524523 IFT172Q9UG01 1749 aa10.22□□□□□ -0.77
CTR9-202ENST00000524523 KIF13AQ9H1H9 1805 aa10.22□□□□□ -0.77
CTR9-202ENST00000524523 NUTM2FA1L443 756 aa10.22□□□□□ -0.77
CTR9-202ENST00000524523 PRSS12P56730 875 aa10.22□□□□□ -0.77
CTR9-202ENST00000524523 CFAP70Q5T0N1 1121 aa10.22□□□□□ -0.77
CTR9-202ENST00000524523 PACS2Q86VP3 889 aa10.22□□□□□ -0.77
CTR9-202ENST00000524523 CDCA7LQ96GN5 454 aa10.22□□□□□ -0.77
CTR9-202ENST00000524523 BRD4O60885 1362 aaPredicted RBP10.22□□□□□ -0.77
CTR9-202ENST00000524523 IQGAP1P46940 1657 aa10.22□□□□□ -0.77
CTR9-202ENST00000524523 GOLGA8CPA6NN73 597 aa10.21□□□□□ -0.77
CTR9-202ENST00000524523 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.21□□□□□ -0.77
CTR9-202ENST00000524523 ESF1Q9H501 851 aaKnown RBP10.21□□□□□ -0.77
CTR9-202ENST00000524523 ERVK-7P63135 1459 aa10.21□□□□□ -0.78
CTR9-202ENST00000524523 SYNMO15061 1565 aa10.21□□□□□ -0.78
CTR9-202ENST00000524523 SPATA31D1Q6ZQQ2 1576 aa10.2□□□□□ -0.78
CTR9-202ENST00000524523 MYBBP1AQ9BQG0 1328 aaKnown RBP10.2□□□□□ -0.78
CTR9-202ENST00000524523 UGGT1Q9NYU2 1555 aa10.19□□□□□ -0.78
CTR9-202ENST00000524523 DISP3Q9P2K9 1392 aa10.19□□□□□ -0.78
CTR9-202ENST00000524523 MRS2Q9HD23 443 aa10.19□□□□□ -0.78
CTR9-202ENST00000524523 NPDC1Q9NQX5 325 aaPredicted RBP10.19□□□□□ -0.78
CTR9-202ENST00000524523 RBM27Q9P2N5 1060 aaKnown RBP10.19□□□□□ -0.78
CTR9-202ENST00000524523 TSKSQ9UJT2 592 aa10.19□□□□□ -0.78
CTR9-202ENST00000524523 ZMYM3Q14202 1370 aa10.18□□□□□ -0.78
CTR9-202ENST00000524523 PARD3Q8TEW0 1356 aa10.18□□□□□ -0.78
CTR9-202ENST00000524523 CENPJQ9HC77 1338 aaPredicted RBP10.18□□□□□ -0.78
CTR9-202ENST00000524523 TPRNQ4KMQ1 711 aa10.18□□□□□ -0.78
CTR9-202ENST00000524523 LAPTM4BQ86VI4 370 aa10.18□□□□□ -0.78
CTR9-202ENST00000524523 NLRP13Q86W25 1043 aa10.18□□□□□ -0.78
CTR9-202ENST00000524523 GTF3C3Q9Y5Q9 886 aa10.18□□□□□ -0.78
CTR9-202ENST00000524523 PPLO60437 1756 aa10.18□□□□□ -0.78
CTR9-202ENST00000524523 NEXMIFQ5QGS0 1516 aa10.17□□□□□ -0.78
CTR9-202ENST00000524523 PTGDRQ13258 359 aa10.17□□□□□ -0.78
CTR9-202ENST00000524523 RBM26Q5T8P6 1007 aaKnown RBP10.17□□□□□ -0.78
CTR9-202ENST00000524523 TMC1Q8TDI8 760 aa10.17□□□□□ -0.78
CTR9-202ENST00000524523 SIRT1Q96EB6 747 aa10.17□□□□□ -0.78
CTR9-202ENST00000524523 PANK3Q9H999 370 aa10.17□□□□□ -0.78
CTR9-202ENST00000524523 PREX1Q8TCU6 1659 aa10.17□□□□□ -0.78
CTR9-202ENST00000524523 TMEM131LA2VDJ0 1609 aa10.17□□□□□ -0.78
CTR9-202ENST00000524523 MYO3AQ8NEV4 1616 aa10.17□□□□□ -0.78
CTR9-202ENST00000524523 ADGRB1O14514 1584 aa10.17□□□□□ -0.78
CTR9-202ENST00000524523 FCHSD2O94868 740 aa10.16□□□□□ -0.78
CTR9-202ENST00000524523 PNISRQ8TF01 805 aaKnown RBP10.16□□□□□ -0.78
CTR9-202ENST00000524523 KCTD12Q96CX2 325 aaKnown RBP10.16□□□□□ -0.78
CTR9-202ENST00000524523 KNSTRNQ9Y448 316 aa10.16□□□□□ -0.78
CTR9-202ENST00000524523 TSPOAP1O95153 1857 aa10.16□□□□□ -0.78
CTR9-202ENST00000524523 SIGLEC1Q9BZZ2 1709 aa10.16□□□□□ -0.78
CTR9-202ENST00000524523 NINLQ9Y2I6 1382 aa10.15□□□□□ -0.78
CTR9-202ENST00000524523 FBXO31Q5XUX0 539 aaPredicted RBP10.15□□□□□ -0.78
CTR9-202ENST00000524523 POLR3GLQ9BT43 218 aa10.15□□□□□ -0.78
CTR9-202ENST00000524523 ZBED9Q6R2W3 1325 aa10.14□□□□□ -0.79
CTR9-202ENST00000524523 NBPF26B4DH59 902 aa10.14□□□□□ -0.79
CTR9-202ENST00000524523 PADI6Q6TGC4 694 aa10.14□□□□□ -0.79
CTR9-202ENST00000524523 WNT2BQ93097 391 aa10.14□□□□□ -0.79
CTR9-202ENST00000524523 SEPT9Q9UHD8 586 aaPredicted RBP10.14□□□□□ -0.79
CTR9-202ENST00000524523 MROH2AA6NES4 1674 aa10.14□□□□□ -0.79
CTR9-202ENST00000524523 KDM5AP29375 1690 aaKnown RBP10.14□□□□□ -0.79
CTR9-202ENST00000524523 LRPPRCP42704 1394 aaKnown RBP10.14□□□□□ -0.79
CTR9-202ENST00000524523 EVC2Q86UK5 1308 aa10.13□□□□□ -0.79
CTR9-202ENST00000524523 A2ML1A8K2U0 1454 aa10.13□□□□□ -0.79
CTR9-202ENST00000524523 FAM98CQ17RN3 349 aaKnown RBP10.13□□□□□ -0.79
CTR9-202ENST00000524523 FAM198AQ9UFP1 575 aa10.13□□□□□ -0.79
CTR9-202ENST00000524523 NLRP1Q9C000 1473 aa10.12□□□□□ -0.79
CTR9-202ENST00000524523 HNRNPUQ00839 825 aaKnown RBP eCLIP10.12□□□□□ -0.79
CTR9-202ENST00000524523 ERICH6BQ5W0A0 696 aa10.12□□□□□ -0.79
CTR9-202ENST00000524523 TTC13Q8NBP0 860 aa10.12□□□□□ -0.79
CTR9-202ENST00000524523 TATDN2Q93075 761 aa10.12□□□□□ -0.79
CTR9-202ENST00000524523 PNMA3Q9UL41 463 aa10.12□□□□□ -0.79
CTR9-202ENST00000524523 ANKK1Q8NFD2 765 aa10.11□□□□□ -0.79
CTR9-202ENST00000524523 ZFRQ96KR1 1074 aaKnown RBP10.11□□□□□ -0.79
CTR9-202ENST00000524523 HCSTQ9UBK5 93 aa10.11□□□□□ -0.79
CTR9-202ENST00000524523 TNRQ92752 1358 aa10.11□□□□□ -0.79
CTR9-202ENST00000524523 ABCC11Q96J66 1382 aa10.11□□□□□ -0.79
CTR9-202ENST00000524523 HIC1Q14526 733 aa10.1□□□□□ -0.79
CTR9-202ENST00000524523 CCDC184Q52MB2 194 aa10.1□□□□□ -0.79
CTR9-202ENST00000524523 NUDT18Q6ZVK8 323 aa10.1□□□□□ -0.79
CTR9-202ENST00000524523 GPIHBP1Q8IV16 184 aa10.1□□□□□ -0.79
CTR9-202ENST00000524523 NGEFQ8N5V2 710 aa10.1□□□□□ -0.79
CTR9-202ENST00000524523 TRAK1Q9UPV9 953 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms