RNA–Protein interactions for RNA: ENST00000524111.5

SREK1-215, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, human

TSL 5

Gene SREK1, Length 4,074 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREK1-215	ENST00000524111	RILPL2	Q969X0	211 aa		10.84	□□□□□ -0.67
SREK1-215	ENST00000524111	ADGRB3	O60242	1522 aa		10.83	□□□□□ -0.68
SREK1-215	ENST00000524111	CASC1	Q6TDU7	716 aa		10.83	□□□□□ -0.68
SREK1-215	ENST00000524111	CFAP44	Q96MT7	982 aa		10.83	□□□□□ -0.68
SREK1-215	ENST00000524111	BRPF3	Q9ULD4	1205 aa		10.83	□□□□□ -0.68
SREK1-215	ENST00000524111	TEF	Q10587	303 aa		10.83	□□□□□ -0.68
SREK1-215	ENST00000524111	IFT57	Q9NWB7	429 aa		10.83	□□□□□ -0.68
SREK1-215	ENST00000524111	PRR36	Q9H6K5	1346 aa		10.82	□□□□□ -0.68
SREK1-215	ENST00000524111	KCNA6	P17658	529 aa		10.82	□□□□□ -0.68
SREK1-215	ENST00000524111	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	10.82	□□□□□ -0.68
SREK1-215	ENST00000524111	TSHZ3	Q63HK5	1081 aa		10.82	□□□□□ -0.68
SREK1-215	ENST00000524111	FOXD4L3	Q6VB84	417 aa	Predicted RBP	10.82	□□□□□ -0.68
SREK1-215	ENST00000524111	USP35	Q9P2H5	1018 aa		10.82	□□□□□ -0.68
SREK1-215	ENST00000524111	EXOC6B	Q9Y2D4	811 aa		10.82	□□□□□ -0.68
SREK1-215	ENST00000524111	ANXA1	P04083	346 aa		10.81	□□□□□ -0.68
SREK1-215	ENST00000524111	TBC1D2	Q9BYX2	928 aa		10.81	□□□□□ -0.68
SREK1-215	ENST00000524111	ZNF330	Q9Y3S2	320 aa	Predicted RBP	10.81	□□□□□ -0.68
SREK1-215	ENST00000524111	IQGAP1	P46940	1657 aa		10.81	□□□□□ -0.68
SREK1-215	ENST00000524111	C16orf71	Q8IYS4	520 aa	Predicted RBP	10.81	□□□□□ -0.68
SREK1-215	ENST00000524111	ZBTB40	Q9NUA8	1239 aa		10.81	□□□□□ -0.68
SREK1-215	ENST00000524111	PPP6R1	Q9UPN7	881 aa		10.81	□□□□□ -0.68
SREK1-215	ENST00000524111	MAP3K19	Q56UN5	1328 aa		10.81	□□□□□ -0.68
SREK1-215	ENST00000524111	GLI2	P10070	1586 aa		10.81	□□□□□ -0.68
SREK1-215	ENST00000524111	AAMP	Q13685	434 aa		10.81	□□□□□ -0.68
SREK1-215	ENST00000524111	TULP4	Q9NRJ4	1543 aa		10.81	□□□□□ -0.68
SREK1-215	ENST00000524111	MROH2A	A6NES4	1674 aa		10.81	□□□□□ -0.68
SREK1-215	ENST00000524111	HMMR	O75330	724 aa		10.8	□□□□□ -0.68
SREK1-215	ENST00000524111	MRPL50	Q8N5N7	158 aa	Known RBP	10.8	□□□□□ -0.68
SREK1-215	ENST00000524111	CCDC9	Q9Y3X0	531 aa	Known RBP	10.8	□□□□□ -0.68
SREK1-215	ENST00000524111	MROH1	Q8NDA8	1641 aa		10.8	□□□□□ -0.68
SREK1-215	ENST00000524111	ZC3H6	P61129	1189 aa	Known RBP	10.8	□□□□□ -0.68
SREK1-215	ENST00000524111	ALDH1L2	Q3SY69	923 aa		10.8	□□□□□ -0.68
SREK1-215	ENST00000524111	MEIS3	Q99687	375 aa		10.8	□□□□□ -0.68
SREK1-215	ENST00000524111	AIMP1	Q12904	312 aa	Known RBP	10.8	□□□□□ -0.68
SREK1-215	ENST00000524111	FRMPD1	Q5SYB0	1578 aa		10.8	□□□□□ -0.68
SREK1-215	ENST00000524111	MTHFSD	Q2M296	383 aa	Known RBP	10.79	□□□□□ -0.68
SREK1-215	ENST00000524111	LAMC1	P11047	1609 aa		10.79	□□□□□ -0.68
SREK1-215	ENST00000524111	IL16	Q14005	1332 aa		10.79	□□□□□ -0.68
SREK1-215	ENST00000524111	ROBO2	Q9HCK4	1378 aa		10.79	□□□□□ -0.68
SREK1-215	ENST00000524111	HDGFL1	Q5TGJ6	251 aa		10.79	□□□□□ -0.68
SREK1-215	ENST00000524111	QRICH2	Q9H0J4	1663 aa		10.78	□□□□□ -0.68
SREK1-215	ENST00000524111	G2E3	Q7L622	706 aa		10.78	□□□□□ -0.68
SREK1-215	ENST00000524111	EYA1	Q99502	592 aa		10.78	□□□□□ -0.68
SREK1-215	ENST00000524111	RBM42	Q9BTD8	480 aa	Known RBP	10.78	□□□□□ -0.68
SREK1-215	ENST00000524111	IL1RAPL2	Q9NP60	686 aa		10.78	□□□□□ -0.68
SREK1-215	ENST00000524111	DIP2C	Q9Y2E4	1556 aa		10.78	□□□□□ -0.68
SREK1-215	ENST00000524111	GAS2L2	Q8NHY3	880 aa		10.78	□□□□□ -0.68
SREK1-215	ENST00000524111	TBC1D32	Q96NH3	1257 aa		10.78	□□□□□ -0.68
SREK1-215	ENST00000524111	NLRP2	Q9NX02	1062 aa		10.78	□□□□□ -0.68
SREK1-215	ENST00000524111	MAP4K4	O95819	1239 aa	Predicted RBP	10.77	□□□□□ -0.68
SREK1-215	ENST00000524111	OTUD7A	Q8TE49	926 aa	Predicted RBP	10.77	□□□□□ -0.68
SREK1-215	ENST00000524111	PHF23	Q9BUL5	403 aa	Predicted RBP	10.77	□□□□□ -0.68
SREK1-215	ENST00000524111	VWDE	Q8N2E2	1590 aa		10.77	□□□□□ -0.68
SREK1-215	ENST00000524111	ADGRB1	O14514	1584 aa		10.77	□□□□□ -0.69
SREK1-215	ENST00000524111	TAOK2	Q9UL54	1235 aa		10.77	□□□□□ -0.69
SREK1-215	ENST00000524111	C1orf141	Q5JVX7	400 aa		10.77	□□□□□ -0.69
SREK1-215	ENST00000524111	ZNF530	Q6P9A1	599 aa	Predicted RBP	10.77	□□□□□ -0.69
SREK1-215	ENST00000524111	MPRIP	Q6WCQ1	1025 aa		10.77	□□□□□ -0.69
SREK1-215	ENST00000524111	PROSER2	Q86WR7	435 aa	Predicted RBP	10.77	□□□□□ -0.69
SREK1-215	ENST00000524111	ANKLE2	Q86XL3	938 aa		10.77	□□□□□ -0.69
SREK1-215	ENST00000524111	LRRC59	Q96AG4	307 aa	Known RBP	10.77	□□□□□ -0.69
SREK1-215	ENST00000524111	GCC1	Q96CN9	775 aa		10.77	□□□□□ -0.69
SREK1-215	ENST00000524111	TMEM2	Q9UHN6	1383 aa		10.76	□□□□□ -0.69
SREK1-215	ENST00000524111	HDAC1	Q13547	482 aa	Predicted RBP	10.76	□□□□□ -0.69
SREK1-215	ENST00000524111	PHF8	Q9UPP1	1060 aa		10.76	□□□□□ -0.69
SREK1-215	ENST00000524111	ZBTB7B	O15156	539 aa	Predicted RBP	10.76	□□□□□ -0.69
SREK1-215	ENST00000524111	LMTK2	Q8IWU2	1503 aa		10.76	□□□□□ -0.69
SREK1-215	ENST00000524111	CFAP74	Q9C0B2	1584 aa		10.76	□□□□□ -0.69
SREK1-215	ENST00000524111	ANO2	Q9NQ90	1003 aa		10.76	□□□□□ -0.69
SREK1-215	ENST00000524111	CDC45	O75419	566 aa		10.75	□□□□□ -0.69
SREK1-215	ENST00000524111	ARHGAP31	Q2M1Z3	1444 aa		10.75	□□□□□ -0.69
SREK1-215	ENST00000524111	DEPDC5	O75140	1603 aa		10.75	□□□□□ -0.69
SREK1-215	ENST00000524111	A2ML1	A8K2U0	1454 aa		10.75	□□□□□ -0.69
SREK1-215	ENST00000524111	GOLGA6L22	H0YM25	854 aa		10.75	□□□□□ -0.69
SREK1-215	ENST00000524111	KCNJ4	P48050	445 aa		10.75	□□□□□ -0.69
SREK1-215	ENST00000524111	NUCB1	Q02818	461 aa		10.75	□□□□□ -0.69
SREK1-215	ENST00000524111	SMC5	Q8IY18	1101 aa		10.75	□□□□□ -0.69
SREK1-215	ENST00000524111	EDC4	Q6P2E9	1401 aa	Known RBP	10.75	□□□□□ -0.69
SREK1-215	ENST00000524111	NEXMIF	Q5QGS0	1516 aa		10.75	□□□□□ -0.69
SREK1-215	ENST00000524111	GNAT3	A8MTJ3	354 aa		10.75	□□□□□ -0.69
SREK1-215	ENST00000524111	TBC1D9	Q6ZT07	1266 aa		10.75	□□□□□ -0.69
SREK1-215	ENST00000524111	CHMP5	Q9NZZ3	219 aa		10.75	□□□□□ -0.69
SREK1-215	ENST00000524111	SURF6	O75683	361 aa	Known RBP	10.74	□□□□□ -0.69
SREK1-215	ENST00000524111	UBTFL1	P0CB47	393 aa	Predicted RBP	10.74	□□□□□ -0.69
SREK1-215	ENST00000524111	CCDC30	Q5VVM6	783 aa		10.74	□□□□□ -0.69
SREK1-215	ENST00000524111	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	10.74	□□□□□ -0.69
SREK1-215	ENST00000524111	CAMSAP1	Q5T5Y3	1602 aa		10.74	□□□□□ -0.69
SREK1-215	ENST00000524111	C9orf78	Q9NZ63	289 aa	Predicted RBP	10.74	□□□□□ -0.69
SREK1-215	ENST00000524111	NRXN1	Q9ULB1	1477 aa		10.74	□□□□□ -0.69
SREK1-215	ENST00000524111	CHMP3	Q9Y3E7	222 aa		10.74	□□□□□ -0.69
SREK1-215	ENST00000524111	ZFYVE9	O95405	1425 aa		10.73	□□□□□ -0.69
SREK1-215	ENST00000524111	PTPRM	P28827	1452 aa		10.73	□□□□□ -0.69
SREK1-215	ENST00000524111	GNAI2	P04899	355 aa		10.73	□□□□□ -0.69
SREK1-215	ENST00000524111	ALK	Q9UM73	1620 aa		10.73	□□□□□ -0.69
SREK1-215	ENST00000524111	FLII	Q13045	1269 aa		10.73	□□□□□ -0.69
SREK1-215	ENST00000524111	LRRFIP2	Q9Y608	721 aa	Known RBP	10.72	□□□□□ -0.69
SREK1-215	ENST00000524111	NUTM1	Q86Y26	1132 aa		10.72	□□□□□ -0.69
SREK1-215	ENST00000524111	ORAI2	Q96SN7	254 aa		10.72	□□□□□ -0.69
SREK1-215	ENST00000524111	PIK3C2B	O00750	1634 aa		10.72	□□□□□ -0.69
SREK1-215	ENST00000524111	INTS3	Q68E01	1043 aa	Known RBP	10.71	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms