RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 PLA2G2CQ5R387 149 aa7.18□□□□□ -1.26
SKP1-212ENST00000523966 IFFO2Q5TF58 517 aa7.18□□□□□ -1.26
SKP1-212ENST00000523966 PIK3CDO00329 1044 aa7.17□□□□□ -1.26
SKP1-212ENST00000523966 GIGYF1O75420 1035 aaPredicted RBP7.17□□□□□ -1.26
SKP1-212ENST00000523966 SLC19A1P41440 591 aa7.17□□□□□ -1.26
SKP1-212ENST00000523966 ARID5BQ14865 1188 aa7.17□□□□□ -1.26
SKP1-212ENST00000523966 EML3Q32P44 896 aa7.17□□□□□ -1.26
SKP1-212ENST00000523966 C4orf48Q5BLP8 95 aa7.17□□□□□ -1.26
SKP1-212ENST00000523966 RC3H1Q5TC82 1133 aaKnown RBP7.17□□□□□ -1.26
SKP1-212ENST00000523966 VASH1Q7L8A9 365 aaPredicted RBP7.17□□□□□ -1.26
SKP1-212ENST00000523966 PLPP7Q8NBV4 271 aa7.17□□□□□ -1.26
SKP1-212ENST00000523966 PLA2G2EQ9NZK7 142 aa7.17□□□□□ -1.26
SKP1-212ENST00000523966 DOLKQ9UPQ8 538 aa7.17□□□□□ -1.26
SKP1-212ENST00000523966 USP17L3A6NCW0 530 aa7.16□□□□□ -1.26
SKP1-212ENST00000523966 USP17L4A6NCW7 530 aa7.16□□□□□ -1.26
SKP1-212ENST00000523966 LARP1Q6PKG0 1096 aaKnown RBP7.16□□□□□ -1.26
SKP1-212ENST00000523966 USP17L2Q6R6M4 530 aa7.16□□□□□ -1.26
SKP1-212ENST00000523966 USP17L1Q7RTZ2 530 aa7.16□□□□□ -1.26
SKP1-212ENST00000523966 PLEKHM2Q8IWE5 1019 aa7.16□□□□□ -1.26
SKP1-212ENST00000523966 TRMT44Q8IYL2 757 aaKnown RBP7.16□□□□□ -1.26
SKP1-212ENST00000523966 SIRT1Q96EB6 747 aa7.16□□□□□ -1.26
SKP1-212ENST00000523966 RAB15P59190 212 aa7.15□□□□□ -1.26
SKP1-212ENST00000523966 TRIM50Q86XT4 487 aa7.15□□□□□ -1.26
SKP1-212ENST00000523966 SEPT12Q8IYM1 358 aa7.15□□□□□ -1.26
SKP1-212ENST00000523966 DEPDC4Q8N2C3 294 aa7.15□□□□□ -1.26
SKP1-212ENST00000523966 KCTD15Q96SI1 283 aaPredicted RBP7.15□□□□□ -1.26
SKP1-212ENST00000523966 C1QTNF2Q9BXJ5 285 aa7.15□□□□□ -1.26
SKP1-212ENST00000523966 NOD1Q9Y239 953 aa7.15□□□□□ -1.26
SKP1-212ENST00000523966 RBM19Q9Y4C8 960 aaKnown RBP7.15□□□□□ -1.26
SKP1-212ENST00000523966 ATP5J2-PTCD1G3V325 749 aa7.14□□□□□ -1.27
SKP1-212ENST00000523966 SKOR1P84550 965 aa7.14□□□□□ -1.27
SKP1-212ENST00000523966 NCOA4Q13772 614 aa7.14□□□□□ -1.27
SKP1-212ENST00000523966 OXLD1Q5BKU9 147 aa7.14□□□□□ -1.27
SKP1-212ENST00000523966 LIAT1Q6ZQX7 453 aa7.14□□□□□ -1.27
SKP1-212ENST00000523966 PHTF2Q8N3S3 785 aa7.14□□□□□ -1.27
SKP1-212ENST00000523966 RETREG2Q8NC44 543 aa7.14□□□□□ -1.27
SKP1-212ENST00000523966 MKRN1Q9UHC7 482 aaKnown RBP7.14□□□□□ -1.27
SKP1-212ENST00000523966 ATP1A2P50993 1020 aa7.13□□□□□ -1.27
SKP1-212ENST00000523966 USP4Q13107 963 aa7.13□□□□□ -1.27
SKP1-212ENST00000523966 PCDHB11Q9Y5F2 797 aa7.13□□□□□ -1.27
SKP1-212ENST00000523966 ATG7O95352 703 aa7.12□□□□□ -1.27
SKP1-212ENST00000523966 MYCP01106 439 aaPredicted RBP7.12□□□□□ -1.27
SKP1-212ENST00000523966 RASA1P20936 1047 aa7.12□□□□□ -1.27
SKP1-212ENST00000523966 DHX9Q08211 1270 aaKnown RBP7.12□□□□□ -1.27
SKP1-212ENST00000523966 MAP4K5Q9Y4K4 846 aa7.12□□□□□ -1.27
SKP1-212ENST00000523966 A0A0G2JS52 829 aa7.11□□□□□ -1.27
SKP1-212ENST00000523966 ESPNB1AK53 854 aa7.11□□□□□ -1.27
SKP1-212ENST00000523966 KANK4Q5T7N3 995 aaPredicted RBP7.11□□□□□ -1.27
SKP1-212ENST00000523966 CCDC85AQ96PX6 553 aaPredicted RBP7.11□□□□□ -1.27
SKP1-212ENST00000523966 USTQ9Y2C2 406 aa7.11□□□□□ -1.27
SKP1-212ENST00000523966 ZBTB7CA1YPR0 619 aa7.1□□□□□ -1.27
SKP1-212ENST00000523966 WNT7AO00755 349 aa7.1□□□□□ -1.27
SKP1-212ENST00000523966 SRPK2P78362 688 aaKnown RBP7.1□□□□□ -1.27
SKP1-212ENST00000523966 PSME1Q06323 249 aa7.1□□□□□ -1.27
SKP1-212ENST00000523966 ZNF697Q5TEC3 545 aa7.1□□□□□ -1.27
SKP1-212ENST00000523966 SPRYD7Q5W111 196 aa7.1□□□□□ -1.27
SKP1-212ENST00000523966 TRAIPQ9BWF2 469 aa7.1□□□□□ -1.27
SKP1-212ENST00000523966 CHIC2Q9UKJ5 165 aa7.1□□□□□ -1.27
SKP1-212ENST00000523966 FAM196BA6NMK8 535 aa7.09□□□□□ -1.27
SKP1-212ENST00000523966 FOXC1Q12948 553 aa7.09□□□□□ -1.27
SKP1-212ENST00000523966 TSGA10IPQ3SY00 556 aa7.09□□□□□ -1.27
SKP1-212ENST00000523966 TRAF7Q6Q0C0 670 aa7.09□□□□□ -1.27
SKP1-212ENST00000523966 ZNF598Q86UK7 904 aaKnown RBP7.09□□□□□ -1.27
SKP1-212ENST00000523966 MPNDQ8N594 471 aa7.09□□□□□ -1.27
SKP1-212ENST00000523966 KCTD17Q8N5Z5 321 aa7.09□□□□□ -1.27
SKP1-212ENST00000523966 FAM200AQ8TCP9 573 aa7.09□□□□□ -1.27
SKP1-212ENST00000523966 CDK15Q96Q40 435 aa7.09□□□□□ -1.27
SKP1-212ENST00000523966 PRKD2Q9BZL6 878 aa7.09□□□□□ -1.27
SKP1-212ENST00000523966 DNAAF2Q9NVR5 837 aaKnown RBP7.09□□□□□ -1.27
SKP1-212ENST00000523966 WASF2Q9Y6W5 498 aa7.09□□□□□ -1.27
SKP1-212ENST00000523966 FSHRP23945 695 aa7.08□□□□□ -1.28
SKP1-212ENST00000523966 GTF2IP78347 998 aa7.08□□□□□ -1.28
SKP1-212ENST00000523966 NR5A1Q13285 461 aa7.08□□□□□ -1.28
SKP1-212ENST00000523966 ELOAQ14241 798 aaKnown RBP7.08□□□□□ -1.28
SKP1-212ENST00000523966 INTS6LQ5JSJ4 861 aaKnown RBP7.08□□□□□ -1.28
SKP1-212ENST00000523966 OGFOD1Q8N543 542 aa7.08□□□□□ -1.28
SKP1-212ENST00000523966 MRGPRX2Q96LB1 330 aa7.08□□□□□ -1.28
SKP1-212ENST00000523966 NOVA2Q9UNW9 492 aaKnown RBP7.08□□□□□ -1.28
SKP1-212ENST00000523966 V9GY48 417 aaPredicted RBP7.08□□□□□ -1.28
SKP1-212ENST00000523966 USP17L15C9J2P7 530 aa7.07□□□□□ -1.28
SKP1-212ENST00000523966 USP17L10C9JJH3 530 aa7.07□□□□□ -1.28
SKP1-212ENST00000523966 USP17L13C9JLJ4 530 aa7.07□□□□□ -1.28
SKP1-212ENST00000523966 USP17L12C9JPN9 530 aa7.07□□□□□ -1.28
SKP1-212ENST00000523966 USP17L11C9JVI0 530 aa7.07□□□□□ -1.28
SKP1-212ENST00000523966 USP17L21D6R901 530 aa7.07□□□□□ -1.28
SKP1-212ENST00000523966 USP17L18D6R9N7 530 aa7.07□□□□□ -1.28
SKP1-212ENST00000523966 USP17L22D6RA61 530 aa7.07□□□□□ -1.28
SKP1-212ENST00000523966 USP17L17D6RBQ6 530 aa7.07□□□□□ -1.28
SKP1-212ENST00000523966 USP17L19D6RCP7 530 aa7.07□□□□□ -1.28
SKP1-212ENST00000523966 USP17L20D6RJB6 530 aa7.07□□□□□ -1.28
SKP1-212ENST00000523966 ERVH48-1M5A8F1 160 aa7.07□□□□□ -1.28
SKP1-212ENST00000523966 ADH1CP00326 375 aa7.07□□□□□ -1.28
SKP1-212ENST00000523966 USP17L24Q0WX57 530 aa7.07□□□□□ -1.28
SKP1-212ENST00000523966 AEBP1Q8IUX7 1158 aa7.07□□□□□ -1.28
SKP1-212ENST00000523966 CCDC116Q8IYX3 515 aa7.07□□□□□ -1.28
SKP1-212ENST00000523966 LARGE2Q8N3Y3 721 aa7.07□□□□□ -1.28
SKP1-212ENST00000523966 CDCA7Q9BWT1 371 aaPredicted RBP7.07□□□□□ -1.28
SKP1-212ENST00000523966 PGPEP1Q9NXJ5 209 aa7.07□□□□□ -1.28
SKP1-212ENST00000523966 TLL2Q9Y6L7 1015 aa7.07□□□□□ -1.28
SKP1-212ENST00000523966 TTC24A2A3L6 582 aaPredicted RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 235.2 ms