RNA–Protein interactions for RNA: ENST00000523675.1

PTK2-248, Transcript of protein tyrosine kinase 2, humanhuman

TSL 3

Gene PTK2, Length 650 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2-248ENST00000523675 XPCQ01831 940 aaPredicted RBP12.32□□□□□ -0.44
PTK2-248ENST00000523675 BOLA1Q9Y3E2 137 aa12.32□□□□□ -0.44
PTK2-248ENST00000523675 RGPD8O14715 1765 aaPredicted RBP12.32□□□□□ -0.44
PTK2-248ENST00000523675 ARHGEF10O15013 1369 aa12.31□□□□□ -0.44
PTK2-248ENST00000523675 ATAD2Q6PL18 1390 aa12.31□□□□□ -0.44
PTK2-248ENST00000523675 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.31□□□□□ -0.44
PTK2-248ENST00000523675 TNS3Q68CZ2 1445 aa12.3□□□□□ -0.44
PTK2-248ENST00000523675 SNPHO15079 494 aa12.3□□□□□ -0.44
PTK2-248ENST00000523675 CCDC125Q86Z20 511 aa12.3□□□□□ -0.44
PTK2-248ENST00000523675 UNC5CLQ8IV45 518 aa12.3□□□□□ -0.44
PTK2-248ENST00000523675 GJD4Q96KN9 370 aaPredicted RBP12.3□□□□□ -0.44
PTK2-248ENST00000523675 SLIT2O94813 1529 aa12.29□□□□□ -0.44
PTK2-248ENST00000523675 TRAK1Q9UPV9 953 aa12.29□□□□□ -0.44
PTK2-248ENST00000523675 KDM2AQ9Y2K7 1162 aa12.29□□□□□ -0.44
PTK2-248ENST00000523675 WASLO00401 505 aaPredicted RBP12.28□□□□□ -0.44
PTK2-248ENST00000523675 SAFB2Q14151 953 aaKnown RBP eCLIP12.28□□□□□ -0.44
PTK2-248ENST00000523675 USP32Q8NFA0 1604 aa12.28□□□□□ -0.44
PTK2-248ENST00000523675 SOX12O15370 315 aa12.27□□□□□ -0.45
PTK2-248ENST00000523675 EP400Q96L91 3159 aa12.27□□□□□ -0.45
PTK2-248ENST00000523675 GPRASP1Q5JY77 1395 aa12.27□□□□□ -0.45
PTK2-248ENST00000523675 TULP4Q9NRJ4 1543 aa12.27□□□□□ -0.45
PTK2-248ENST00000523675 KIAA1210Q9ULL0 1709 aa12.26□□□□□ -0.45
PTK2-248ENST00000523675 HAP1P54257 671 aaPredicted RBP12.26□□□□□ -0.45
PTK2-248ENST00000523675 TMEM121BQ9BXQ6 578 aaPredicted RBP12.26□□□□□ -0.45
PTK2-248ENST00000523675 NWD2Q9ULI1 1742 aa12.25□□□□□ -0.45
PTK2-248ENST00000523675 G3V3G9 751 aa12.25□□□□□ -0.45
PTK2-248ENST00000523675 ONECUT3O60422 494 aaPredicted RBP12.25□□□□□ -0.45
PTK2-248ENST00000523675 VPS72Q15906 364 aa12.25□□□□□ -0.45
PTK2-248ENST00000523675 PMFBP1Q8TBY8 1022 aa12.25□□□□□ -0.45
PTK2-248ENST00000523675 ECM2O94769 699 aaPredicted RBP12.24□□□□□ -0.45
PTK2-248ENST00000523675 MINK1Q8N4C8 1332 aaPredicted RBP12.24□□□□□ -0.45
PTK2-248ENST00000523675 ARHGEF28Q8N1W1 1705 aaKnown RBP12.23□□□□□ -0.45
PTK2-248ENST00000523675 TRPM3Q9HCF6 1732 aaPredicted RBP12.23□□□□□ -0.45
PTK2-248ENST00000523675 RALGAPBQ86X10 1494 aa12.23□□□□□ -0.45
PTK2-248ENST00000523675 PRR36Q9H6K5 1346 aa12.23□□□□□ -0.45
PTK2-248ENST00000523675 LMOD2Q6P5Q4 547 aa12.23□□□□□ -0.45
PTK2-248ENST00000523675 HIRIP3Q9BW71 556 aaPredicted RBP12.23□□□□□ -0.45
PTK2-248ENST00000523675 ITSN1Q15811 1721 aa12.23□□□□□ -0.45
PTK2-248ENST00000523675 ABCA3Q99758 1704 aa12.23□□□□□ -0.45
PTK2-248ENST00000523675 ALS2Q96Q42 1657 aa12.22□□□□□ -0.45
PTK2-248ENST00000523675 NGDNQ8NEJ9 315 aaKnown RBP12.22□□□□□ -0.45
PTK2-248ENST00000523675 CABLES1Q8TDN4 633 aa12.22□□□□□ -0.45
PTK2-248ENST00000523675 MS4A4AQ96JQ5 239 aa12.22□□□□□ -0.45
PTK2-248ENST00000523675 TAOK2Q9UL54 1235 aa12.22□□□□□ -0.45
PTK2-248ENST00000523675 GLI3P10071 1580 aa12.22□□□□□ -0.45
PTK2-248ENST00000523675 FAM83GA6ND36 823 aa12.21□□□□□ -0.45
PTK2-248ENST00000523675 NUDT16Q96DE0 195 aaKnown RBP12.21□□□□□ -0.45
PTK2-248ENST00000523675 PLCH1Q4KWH8 1693 aa12.2□□□□□ -0.46
PTK2-248ENST00000523675 CDAN1Q8IWY9 1227 aa12.2□□□□□ -0.46
PTK2-248ENST00000523675 BCL11BQ9C0K0 894 aaPredicted RBP12.2□□□□□ -0.46
PTK2-248ENST00000523675 ATP7BP35670 1465 aa12.2□□□□□ -0.46
PTK2-248ENST00000523675 POLR3AO14802 1390 aaPredicted RBP12.19□□□□□ -0.46
PTK2-248ENST00000523675 PLEKHG3A1L390 1219 aa12.19□□□□□ -0.46
PTK2-248ENST00000523675 CDK19Q9BWU1 502 aa12.19□□□□□ -0.46
PTK2-248ENST00000523675 COL14A1Q05707 1796 aaKnown RBP12.19□□□□□ -0.46
PTK2-248ENST00000523675 SEPT12Q8IYM1 358 aa12.18□□□□□ -0.46
PTK2-248ENST00000523675 BLMP54132 1417 aaPredicted RBP12.18□□□□□ -0.46
PTK2-248ENST00000523675 RGL2O15211 777 aa12.17□□□□□ -0.46
PTK2-248ENST00000523675 MICALL2Q8IY33 904 aa12.17□□□□□ -0.46
PTK2-248ENST00000523675 BTG4Q9NY30 223 aa12.17□□□□□ -0.46
PTK2-248ENST00000523675 BRD4O60885 1362 aaPredicted RBP12.17□□□□□ -0.46
PTK2-248ENST00000523675 NBPF8Q3BBV2 869 aa12.16□□□□□ -0.46
PTK2-248ENST00000523675 CCDC9Q9Y3X0 531 aaKnown RBP12.16□□□□□ -0.46
PTK2-248ENST00000523675 STK24Q9Y6E0 443 aa12.16□□□□□ -0.46
PTK2-248ENST00000523675 NRAPQ86VF7 1730 aa12.16□□□□□ -0.46
PTK2-248ENST00000523675 CRYBG1Q9Y4K1 1723 aa12.16□□□□□ -0.46
PTK2-248ENST00000523675 SRCAPQ6ZRS2 3230 aa12.16□□□□□ -0.46
PTK2-248ENST00000523675 TOPAZ1Q8N9V7 1692 aa12.16□□□□□ -0.46
PTK2-248ENST00000523675 BRWD3Q6RI45 1802 aa12.16□□□□□ -0.46
PTK2-248ENST00000523675 NBPF1Q3BBV0 1214 aa12.15□□□□□ -0.46
PTK2-248ENST00000523675 KRT27Q7Z3Y8 459 aa12.15□□□□□ -0.46
PTK2-248ENST00000523675 MARVELD3Q96A59 401 aa12.15□□□□□ -0.46
PTK2-248ENST00000523675 ACEP12821 1306 aa12.14□□□□□ -0.47
PTK2-248ENST00000523675 CENPJQ9HC77 1338 aaPredicted RBP12.14□□□□□ -0.47
PTK2-248ENST00000523675 SPATA31A5Q5VU36 1347 aa12.13□□□□□ -0.47
PTK2-248ENST00000523675 SPATA31A7Q8IWB4 1347 aa12.13□□□□□ -0.47
PTK2-248ENST00000523675 STK25O00506 426 aa12.13□□□□□ -0.47
PTK2-248ENST00000523675 HOXB3P14651 431 aaPredicted RBP12.13□□□□□ -0.47
PTK2-248ENST00000523675 SF3B2Q13435 895 aaKnown RBP12.13□□□□□ -0.47
PTK2-248ENST00000523675 FBXO22Q8NEZ5 403 aa12.13□□□□□ -0.47
PTK2-248ENST00000523675 L3MBTL2Q969R5 705 aa12.13□□□□□ -0.47
PTK2-248ENST00000523675 PRDM11Q9NQV5 511 aa12.13□□□□□ -0.47
PTK2-248ENST00000523675 NLRP6P59044 892 aa12.12□□□□□ -0.47
PTK2-248ENST00000523675 TMEM92Q6UXU6 159 aa12.12□□□□□ -0.47
PTK2-248ENST00000523675 CPDO75976 1380 aa12.11□□□□□ -0.47
PTK2-248ENST00000523675 KIAA0232Q92628 1395 aa12.11□□□□□ -0.47
PTK2-248ENST00000523675 SRPK2P78362 688 aaKnown RBP12.11□□□□□ -0.47
PTK2-248ENST00000523675 FAM98CQ17RN3 349 aaKnown RBP12.11□□□□□ -0.47
PTK2-248ENST00000523675 NLRP13Q86W25 1043 aa12.11□□□□□ -0.47
PTK2-248ENST00000523675 ABTB2Q8N961 1025 aa12.11□□□□□ -0.47
PTK2-248ENST00000523675 PHRF1Q9P1Y6 1649 aaKnown RBP12.11□□□□□ -0.47
PTK2-248ENST00000523675 MFRPQ9BY79 579 aa12.1□□□□□ -0.47
PTK2-248ENST00000523675 PPIP5K1Q6PFW1 1433 aa12.1□□□□□ -0.47
PTK2-248ENST00000523675 SPATA31A1Q5TZJ5 1347 aa12.1□□□□□ -0.47
PTK2-248ENST00000523675 QRICH2Q9H0J4 1663 aa12.09□□□□□ -0.47
PTK2-248ENST00000523675 USP19O94966 1318 aa12.09□□□□□ -0.47
PTK2-248ENST00000523675 EVC2Q86UK5 1308 aa12.09□□□□□ -0.47
PTK2-248ENST00000523675 TRPM1Q7Z4N2 1603 aa12.08□□□□□ -0.48
PTK2-248ENST00000523675 THSD7AQ9UPZ6 1657 aa12.08□□□□□ -0.48
PTK2-248ENST00000523675 A0A0G2JS52 829 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms