RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 PIK3CDO00329 1044 aa10.01□□□□□ -0.81
SKP1-208ENST00000521216 RNF135Q8IUD6 432 aa10.01□□□□□ -0.81
SKP1-208ENST00000521216 CYP4X1Q8N118 509 aa10.01□□□□□ -0.81
SKP1-208ENST00000521216 SKIP12755 728 aa10□□□□□ -0.81
SKP1-208ENST00000521216 UCN2Q96RP3 112 aa10□□□□□ -0.81
SKP1-208ENST00000521216 TFIP11Q9UBB9 837 aaKnown RBP10□□□□□ -0.81
SKP1-208ENST00000521216 RFX1P22670 979 aa9.99□□□□□ -0.81
SKP1-208ENST00000521216 FSHRP23945 695 aa9.99□□□□□ -0.81
SKP1-208ENST00000521216 RNF20Q5VTR2 975 aa9.99□□□□□ -0.81
SKP1-208ENST00000521216 TBC1D9Q6ZT07 1266 aa9.99□□□□□ -0.81
SKP1-208ENST00000521216 CDK15Q96Q40 435 aa9.99□□□□□ -0.81
SKP1-208ENST00000521216 PPP1R12CQ9BZL4 782 aa9.99□□□□□ -0.81
SKP1-208ENST00000521216 WASF2Q9Y6W5 498 aa9.99□□□□□ -0.81
SKP1-208ENST00000521216 PALM3A6NDB9 673 aaPredicted RBP9.98□□□□□ -0.81
SKP1-208ENST00000521216 GDF9O60383 454 aa9.98□□□□□ -0.81
SKP1-208ENST00000521216 RGS20O76081 388 aa9.98□□□□□ -0.81
SKP1-208ENST00000521216 SNIP1Q8TAD8 396 aaKnown RBP9.98□□□□□ -0.81
SKP1-208ENST00000521216 MAP4K5Q9Y4K4 846 aa9.98□□□□□ -0.81
SKP1-208ENST00000521216 ADH1CP00326 375 aa9.97□□□□□ -0.81
SKP1-208ENST00000521216 LMOD1P29536 600 aaPredicted RBP9.97□□□□□ -0.81
SKP1-208ENST00000521216 GRM5P41594 1212 aa9.97□□□□□ -0.81
SKP1-208ENST00000521216 TSGA10IPQ3SY00 556 aa9.96□□□□□ -0.82
SKP1-208ENST00000521216 INTS6LQ5JSJ4 861 aaKnown RBP9.96□□□□□ -0.82
SKP1-208ENST00000521216 DEPDC4Q8N2C3 294 aa9.96□□□□□ -0.82
SKP1-208ENST00000521216 PHTF2Q8N3S3 785 aa9.96□□□□□ -0.82
SKP1-208ENST00000521216 MPNDQ8N594 471 aa9.96□□□□□ -0.82
SKP1-208ENST00000521216 ESPNB1AK53 854 aa9.95□□□□□ -0.82
SKP1-208ENST00000521216 J3QL48 77 aa9.95□□□□□ -0.82
SKP1-208ENST00000521216 TRIM67Q6ZTA4 783 aa9.95□□□□□ -0.82
SKP1-208ENST00000521216 PLPP7Q8NBV4 271 aa9.95□□□□□ -0.82
SKP1-208ENST00000521216 PDZRN3Q9UPQ7 1066 aa9.95□□□□□ -0.82
SKP1-208ENST00000521216 DOLKQ9UPQ8 538 aa9.95□□□□□ -0.82
SKP1-208ENST00000521216 PCDHB11Q9Y5F2 797 aa9.95□□□□□ -0.82
SKP1-208ENST00000521216 ATP9BO43861 1147 aa9.94□□□□□ -0.82
SKP1-208ENST00000521216 NR5A1Q13285 461 aa9.94□□□□□ -0.82
SKP1-208ENST00000521216 OXLD1Q5BKU9 147 aa9.94□□□□□ -0.82
SKP1-208ENST00000521216 SEPT12Q8IYM1 358 aa9.94□□□□□ -0.82
SKP1-208ENST00000521216 CCDC85AQ96PX6 553 aaPredicted RBP9.94□□□□□ -0.82
SKP1-208ENST00000521216 USP17L5A8MUK1 530 aa9.93□□□□□ -0.82
SKP1-208ENST00000521216 ERVH48-1M5A8F1 160 aa9.93□□□□□ -0.82
SKP1-208ENST00000521216 NNTQ13423 1086 aa9.93□□□□□ -0.82
SKP1-208ENST00000521216 NFATC2IPQ8NCF5 419 aa9.93□□□□□ -0.82
SKP1-208ENST00000521216 NR3C2P08235 984 aa9.92□□□□□ -0.82
SKP1-208ENST00000521216 PRR20EP86478 221 aa9.92□□□□□ -0.82
SKP1-208ENST00000521216 PRR20CP86479 221 aa9.92□□□□□ -0.82
SKP1-208ENST00000521216 PRR20DP86480 221 aa9.92□□□□□ -0.82
SKP1-208ENST00000521216 PRR20BP86481 221 aa9.92□□□□□ -0.82
SKP1-208ENST00000521216 PRR20AP86496 221 aa9.92□□□□□ -0.82
SKP1-208ENST00000521216 CFAP70Q5T0N1 1121 aa9.92□□□□□ -0.82
SKP1-208ENST00000521216 CCDC116Q8IYX3 515 aa9.92□□□□□ -0.82
SKP1-208ENST00000521216 ESF1Q9H501 851 aaKnown RBP9.92□□□□□ -0.82
SKP1-208ENST00000521216 TMPRSS4Q9NRS4 437 aa9.92□□□□□ -0.82
SKP1-208ENST00000521216 TOR4AQ9NXH8 423 aa9.92□□□□□ -0.82
SKP1-208ENST00000521216 MAFBQ9Y5Q3 323 aaPredicted RBP9.92□□□□□ -0.82
SKP1-208ENST00000521216 USP17L3A6NCW0 530 aa9.91□□□□□ -0.82
SKP1-208ENST00000521216 USP17L4A6NCW7 530 aa9.91□□□□□ -0.82
SKP1-208ENST00000521216 DHX9Q08211 1270 aaKnown RBP9.91□□□□□ -0.82
SKP1-208ENST00000521216 MAP7D1Q3KQU3 841 aa9.91□□□□□ -0.82
SKP1-208ENST00000521216 CDCA8Q53HL2 280 aa9.91□□□□□ -0.82
SKP1-208ENST00000521216 USP17L2Q6R6M4 530 aa9.91□□□□□ -0.82
SKP1-208ENST00000521216 USP17L1Q7RTZ2 530 aa9.91□□□□□ -0.82
SKP1-208ENST00000521216 CDCA7Q9BWT1 371 aaPredicted RBP9.91□□□□□ -0.82
SKP1-208ENST00000521216 NCOA4Q13772 614 aa9.9□□□□□ -0.82
SKP1-208ENST00000521216 PPP1R26Q5T8A7 1209 aaPredicted RBP9.9□□□□□ -0.82
SKP1-208ENST00000521216 SMPD1P17405 629 aa9.89□□□□□ -0.83
SKP1-208ENST00000521216 EML3Q32P44 896 aa9.89□□□□□ -0.83
SKP1-208ENST00000521216 CYLDQ9NQC7 956 aa9.89□□□□□ -0.83
SKP1-208ENST00000521216 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.88□□□□□ -0.83
SKP1-208ENST00000521216 GFRA3O60609 400 aa9.88□□□□□ -0.83
SKP1-208ENST00000521216 TRAF7Q6Q0C0 670 aa9.88□□□□□ -0.83
SKP1-208ENST00000521216 CCDC125Q86Z20 511 aa9.88□□□□□ -0.83
SKP1-208ENST00000521216 EMILIN1Q9Y6C2 1016 aa9.88□□□□□ -0.83
SKP1-208ENST00000521216 MYCP01106 439 aaPredicted RBP9.87□□□□□ -0.83
SKP1-208ENST00000521216 USP4Q13107 963 aa9.87□□□□□ -0.83
SKP1-208ENST00000521216 ZNF784Q8NCA9 323 aaPredicted RBP9.87□□□□□ -0.83
SKP1-208ENST00000521216 VRTNQ9H8Y1 702 aa9.87□□□□□ -0.83
SKP1-208ENST00000521216 PGPEP1Q9NXJ5 209 aa9.87□□□□□ -0.83
SKP1-208ENST00000521216 MKRN1Q9UHC7 482 aaKnown RBP9.87□□□□□ -0.83
SKP1-208ENST00000521216 CHIC2Q9UKJ5 165 aa9.87□□□□□ -0.83
SKP1-208ENST00000521216 FAM187AA6NFU0 413 aa9.86□□□□□ -0.83
SKP1-208ENST00000521216 SCTRP47872 440 aa9.86□□□□□ -0.83
SKP1-208ENST00000521216 WDR4P57081 412 aaKnown RBP9.86□□□□□ -0.83
SKP1-208ENST00000521216 PLEKHM2Q8IWE5 1019 aa9.86□□□□□ -0.83
SKP1-208ENST00000521216 HPS1Q92902 700 aa9.86□□□□□ -0.83
SKP1-208ENST00000521216 NOD1Q9Y239 953 aa9.86□□□□□ -0.83
SKP1-208ENST00000521216 LZTS3O60299 673 aaPredicted RBP9.85□□□□□ -0.83
SKP1-208ENST00000521216 ZIC2O95409 532 aaPredicted RBP9.85□□□□□ -0.83
SKP1-208ENST00000521216 MYT1Q01538 1121 aa9.85□□□□□ -0.83
SKP1-208ENST00000521216 TRIM52Q96A61 297 aa9.85□□□□□ -0.83
SKP1-208ENST00000521216 SIRT1Q96EB6 747 aa9.85□□□□□ -0.83
SKP1-208ENST00000521216 CC2D2BQ6DHV5 1058 aa9.84□□□□□ -0.83
SKP1-208ENST00000521216 PBXIP1Q96AQ6 731 aa9.84□□□□□ -0.83
SKP1-208ENST00000521216 ITPKCQ96DU7 683 aa9.84□□□□□ -0.83
SKP1-208ENST00000521216 ACIN1Q9UKV3 1341 aaKnown RBP9.83□□□□□ -0.84
SKP1-208ENST00000521216 PSME1Q06323 249 aa9.83□□□□□ -0.84
SKP1-208ENST00000521216 ZFAND3Q9H8U3 227 aa9.83□□□□□ -0.84
SKP1-208ENST00000521216 RASA1P20936 1047 aa9.82□□□□□ -0.84
SKP1-208ENST00000521216 CBLBQ13191 982 aa9.82□□□□□ -0.84
SKP1-208ENST00000521216 PKDCCQ504Y2 493 aa9.82□□□□□ -0.84
SKP1-208ENST00000521216 KANK4Q5T7N3 995 aaPredicted RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms