RNA–Protein interactions for RNA: ENST00000519479.1

PCDHGB4-201, Transcript of protocadherin gamma subfamily B, 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB4, Length 4,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4-201ENST00000519479 MIS18AQ9NYP9 233 aa13.81□□□□□ -0.2
PCDHGB4-201ENST00000519479 NLRP1Q9C000 1473 aa13.81□□□□□ -0.2
PCDHGB4-201ENST00000519479 TMEM2Q9UHN6 1383 aa13.81□□□□□ -0.2
PCDHGB4-201ENST00000519479 EVA1CP58658 441 aa13.81□□□□□ -0.2
PCDHGB4-201ENST00000519479 SKOR2Q2VWA4 1001 aaPredicted RBP13.81□□□□□ -0.2
PCDHGB4-201ENST00000519479 DNTTIP2Q5QJE6 756 aaKnown RBP13.81□□□□□ -0.2
PCDHGB4-201ENST00000519479 TAOK2Q9UL54 1235 aa13.81□□□□□ -0.2
PCDHGB4-201ENST00000519479 C8orf34Q49A92 452 aa13.81□□□□□ -0.2
PCDHGB4-201ENST00000519479 TET3O43151 1660 aa13.81□□□□□ -0.2
PCDHGB4-201ENST00000519479 TRPM2O94759 1503 aa13.81□□□□□ -0.2
PCDHGB4-201ENST00000519479 PTPRTO14522 1441 aa13.81□□□□□ -0.2
PCDHGB4-201ENST00000519479 CCDC9Q9Y3X0 531 aaKnown RBP13.81□□□□□ -0.2
PCDHGB4-201ENST00000519479 MSNP26038 577 aaKnown RBP13.8□□□□□ -0.2
PCDHGB4-201ENST00000519479 ABCC3O15438 1527 aa13.8□□□□□ -0.2
PCDHGB4-201ENST00000519479 CFAP65Q6ZU64 1925 aaKnown RBP13.8□□□□□ -0.2
PCDHGB4-201ENST00000519479 POLKQ9UBT6 870 aa13.8□□□□□ -0.2
PCDHGB4-201ENST00000519479 FAM83GA6ND36 823 aa13.8□□□□□ -0.2
PCDHGB4-201ENST00000519479 GNAI2P04899 355 aa13.79□□□□□ -0.2
PCDHGB4-201ENST00000519479 IQGAP3Q86VI3 1631 aa13.79□□□□□ -0.2
PCDHGB4-201ENST00000519479 ZRSR1Q15695 479 aaKnown RBP13.79□□□□□ -0.2
PCDHGB4-201ENST00000519479 FOXD4L6Q3SYB3 417 aaPredicted RBP13.79□□□□□ -0.2
PCDHGB4-201ENST00000519479 FOXD4L3Q6VB84 417 aaPredicted RBP13.79□□□□□ -0.2
PCDHGB4-201ENST00000519479 MBIPQ9NS73 344 aa13.79□□□□□ -0.2
PCDHGB4-201ENST00000519479 ERVK-7P63135 1459 aa13.78□□□□□ -0.2
PCDHGB4-201ENST00000519479 CCT4P50991 539 aaKnown RBP13.78□□□□□ -0.2
PCDHGB4-201ENST00000519479 HDGFL1Q5TGJ6 251 aa13.78□□□□□ -0.2
PCDHGB4-201ENST00000519479 DIAPH3Q9NSV4 1193 aa13.78□□□□□ -0.2
PCDHGB4-201ENST00000519479 UNC13BO14795 1591 aa13.78□□□□□ -0.2
PCDHGB4-201ENST00000519479 UGGT1Q9NYU2 1555 aa13.78□□□□□ -0.2
PCDHGB4-201ENST00000519479 ZRANB1Q9UGI0 708 aa13.78□□□□□ -0.2
PCDHGB4-201ENST00000519479 PRDM15P57071 1507 aaPredicted RBP13.78□□□□□ -0.2
PCDHGB4-201ENST00000519479 SYAP1Q96A49 352 aaPredicted RBP13.78□□□□□ -0.2
PCDHGB4-201ENST00000519479 PHF8Q9UPP1 1060 aa13.78□□□□□ -0.2
PCDHGB4-201ENST00000519479 KDM2BQ8NHM5 1336 aa13.77□□□□□ -0.2
PCDHGB4-201ENST00000519479 EFCAB6Q5THR3 1501 aa13.77□□□□□ -0.21
PCDHGB4-201ENST00000519479 TRAK2O60296 914 aa13.77□□□□□ -0.21
PCDHGB4-201ENST00000519479 NEXNQ0ZGT2 675 aa13.77□□□□□ -0.21
PCDHGB4-201ENST00000519479 MSH6P52701 1360 aa13.77□□□□□ -0.21
PCDHGB4-201ENST00000519479 SURF6O75683 361 aaKnown RBP13.77□□□□□ -0.21
PCDHGB4-201ENST00000519479 RPAP2Q8IXW5 612 aaPredicted RBP13.77□□□□□ -0.21
PCDHGB4-201ENST00000519479 YTHDC2Q9H6S0 1430 aaKnown RBP13.77□□□□□ -0.21
PCDHGB4-201ENST00000519479 INO80Q9ULG1 1556 aaPredicted RBP13.77□□□□□ -0.21
PCDHGB4-201ENST00000519479 AGLP35573 1532 aa13.77□□□□□ -0.21
PCDHGB4-201ENST00000519479 BRPF3Q9ULD4 1205 aa13.76□□□□□ -0.21
PCDHGB4-201ENST00000519479 IFIT2P09913 472 aaKnown RBP13.76□□□□□ -0.21
PCDHGB4-201ENST00000519479 KCNH5Q8NCM2 988 aa13.76□□□□□ -0.21
PCDHGB4-201ENST00000519479 ACEP12821 1306 aa13.76□□□□□ -0.21
PCDHGB4-201ENST00000519479 NUCB2P80303 420 aa13.76□□□□□ -0.21
PCDHGB4-201ENST00000519479 VSIG10Q8N0Z9 540 aa13.76□□□□□ -0.21
PCDHGB4-201ENST00000519479 SBNO2Q9Y2G9 1366 aa13.76□□□□□ -0.21
PCDHGB4-201ENST00000519479 DDX58O95786 925 aaKnown RBP13.75□□□□□ -0.21
PCDHGB4-201ENST00000519479 TTC5Q8N0Z6 440 aa13.75□□□□□ -0.21
PCDHGB4-201ENST00000519479 RAPGEF4Q8WZA2 1011 aa13.75□□□□□ -0.21
PCDHGB4-201ENST00000519479 AIMP1Q12904 312 aaKnown RBP13.75□□□□□ -0.21
PCDHGB4-201ENST00000519479 HDAC1Q13547 482 aaPredicted RBP13.75□□□□□ -0.21
PCDHGB4-201ENST00000519479 TBC1D2Q9BYX2 928 aa13.75□□□□□ -0.21
PCDHGB4-201ENST00000519479 RSPH6AQ9H0K4 717 aa13.75□□□□□ -0.21
PCDHGB4-201ENST00000519479 NLRP2Q9NX02 1062 aa13.75□□□□□ -0.21
PCDHGB4-201ENST00000519479 RABEP1Q15276 862 aa13.75□□□□□ -0.21
PCDHGB4-201ENST00000519479 HSP90AB4PQ58FF6 505 aa13.74□□□□□ -0.21
PCDHGB4-201ENST00000519479 SIRT1Q96EB6 747 aa13.74□□□□□ -0.21
PCDHGB4-201ENST00000519479 PPIP5K1Q6PFW1 1433 aa13.74□□□□□ -0.21
PCDHGB4-201ENST00000519479 PHACTR3Q96KR7 559 aa13.74□□□□□ -0.21
PCDHGB4-201ENST00000519479 RUFY2Q8WXA3 655 aa13.74□□□□□ -0.21
PCDHGB4-201ENST00000519479 DIP2CQ9Y2E4 1556 aa13.74□□□□□ -0.21
PCDHGB4-201ENST00000519479 PLEKHO1Q53GL0 409 aaPredicted RBP13.74□□□□□ -0.21
PCDHGB4-201ENST00000519479 GORABQ5T7V8 394 aa13.74□□□□□ -0.21
PCDHGB4-201ENST00000519479 TBC1D32Q96NH3 1257 aa13.73□□□□□ -0.21
PCDHGB4-201ENST00000519479 NPHP1O15259 732 aa13.73□□□□□ -0.21
PCDHGB4-201ENST00000519479 MCTP1Q6DN14 999 aa13.73□□□□□ -0.21
PCDHGB4-201ENST00000519479 IL27Q8NEV9 243 aa13.73□□□□□ -0.21
PCDHGB4-201ENST00000519479 LMTK2Q8IWU2 1503 aa13.73□□□□□ -0.21
PCDHGB4-201ENST00000519479 NCKAP5LQ9HCH0 1330 aa13.73□□□□□ -0.21
PCDHGB4-201ENST00000519479 KCNA6P17658 529 aa13.73□□□□□ -0.21
PCDHGB4-201ENST00000519479 HSP90AB2PQ58FF8 381 aa13.73□□□□□ -0.21
PCDHGB4-201ENST00000519479 GNAT3A8MTJ3 354 aa13.73□□□□□ -0.21
PCDHGB4-201ENST00000519479 NEK4P51957 841 aa13.73□□□□□ -0.21
PCDHGB4-201ENST00000519479 G3BP1Q13283 466 aaKnown RBP eCLIP13.73□□□□□ -0.21
PCDHGB4-201ENST00000519479 ZNF530Q6P9A1 599 aaPredicted RBP13.73□□□□□ -0.21
PCDHGB4-201ENST00000519479 LRRCC1Q9C099 1032 aa13.73□□□□□ -0.21
PCDHGB4-201ENST00000519479 MEX3CQ5U5Q3 659 aaKnown RBP13.72□□□□□ -0.21
PCDHGB4-201ENST00000519479 K7ELQ4 463 aaPredicted RBP13.72□□□□□ -0.21
PCDHGB4-201ENST00000519479 C19orf44Q9H6X5 657 aa13.72□□□□□ -0.21
PCDHGB4-201ENST00000519479 ZNF521Q96K83 1311 aa13.72□□□□□ -0.21
PCDHGB4-201ENST00000519479 KDM5AP29375 1690 aaKnown RBP13.72□□□□□ -0.21
PCDHGB4-201ENST00000519479 F6X3S4 739 aa13.72□□□□□ -0.21
PCDHGB4-201ENST00000519479 MCM4P33991 863 aa13.72□□□□□ -0.21
PCDHGB4-201ENST00000519479 AEBP1Q8IUX7 1158 aa13.72□□□□□ -0.21
PCDHGB4-201ENST00000519479 MYOM2P54296 1465 aa13.72□□□□□ -0.21
PCDHGB4-201ENST00000519479 TRPM1Q7Z4N2 1603 aa13.71□□□□□ -0.21
PCDHGB4-201ENST00000519479 EXOC6BQ9Y2D4 811 aa13.71□□□□□ -0.21
PCDHGB4-201ENST00000519479 TTC21BQ7Z4L5 1316 aa13.71□□□□□ -0.21
PCDHGB4-201ENST00000519479 SMARCA5O60264 1052 aaPredicted RBP13.71□□□□□ -0.21
PCDHGB4-201ENST00000519479 TAF7LQ5H9L4 462 aa13.71□□□□□ -0.21
PCDHGB4-201ENST00000519479 TSPYL6Q8N831 410 aa13.71□□□□□ -0.21
PCDHGB4-201ENST00000519479 C8orf58Q8NAV2 365 aa13.71□□□□□ -0.21
PCDHGB4-201ENST00000519479 ARHGEF40Q8TER5 1519 aa13.71□□□□□ -0.21
PCDHGB4-201ENST00000519479 RIC3Q7Z5B4 369 aa13.71□□□□□ -0.21
PCDHGB4-201ENST00000519479 ARHGAP45Q92619 1136 aa13.71□□□□□ -0.21
PCDHGB4-201ENST00000519479 SRCIN1Q9C0H9 1055 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms