RNA–Protein interactions for RNA: ENST00000519116.5

CTNNA1-214, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-214ENST00000519116 TRPM3Q9HCF6 1732 aaPredicted RBP9.59□□□□□ -0.87
CTNNA1-214ENST00000519116 PTGER2P43116 358 aa9.58□□□□□ -0.88
CTNNA1-214ENST00000519116 NUTM2GQ5VZR2 741 aa9.58□□□□□ -0.88
CTNNA1-214ENST00000519116 BCL11BQ9C0K0 894 aaPredicted RBP9.58□□□□□ -0.88
CTNNA1-214ENST00000519116 IFT172Q9UG01 1749 aa9.58□□□□□ -0.88
CTNNA1-214ENST00000519116 CPDO75976 1380 aa9.58□□□□□ -0.88
CTNNA1-214ENST00000519116 ATP7BP35670 1465 aa9.58□□□□□ -0.88
CTNNA1-214ENST00000519116 ALS2Q96Q42 1657 aa9.58□□□□□ -0.88
CTNNA1-214ENST00000519116 OVOS2A0A0G2JMS6 1433 aa9.57□□□□□ -0.88
CTNNA1-214ENST00000519116 OVOS2A0A0J9YW53 1432 aa9.57□□□□□ -0.88
CTNNA1-214ENST00000519116 OVOS2Q6IE36 1432 aa9.57□□□□□ -0.88
CTNNA1-214ENST00000519116 NUDT16Q96DE0 195 aaKnown RBP9.57□□□□□ -0.88
CTNNA1-214ENST00000519116 SYT17Q9BSW7 474 aa9.57□□□□□ -0.88
CTNNA1-214ENST00000519116 FHDC1Q9C0D6 1143 aaPredicted RBP9.57□□□□□ -0.88
CTNNA1-214ENST00000519116 RREB1Q92766 1687 aa9.57□□□□□ -0.88
CTNNA1-214ENST00000519116 PDGFDQ9GZP0 370 aaPredicted RBP9.56□□□□□ -0.88
CTNNA1-214ENST00000519116 STK32BQ9NY57 414 aa9.56□□□□□ -0.88
CTNNA1-214ENST00000519116 NUP188Q5SRE5 1749 aa9.56□□□□□ -0.88
CTNNA1-214ENST00000519116 DDB1Q16531 1140 aa9.55□□□□□ -0.88
CTNNA1-214ENST00000519116 ABTB2Q8N961 1025 aa9.55□□□□□ -0.88
CTNNA1-214ENST00000519116 MTFR1LQ9H019 292 aa9.55□□□□□ -0.88
CTNNA1-214ENST00000519116 USP19O94966 1318 aa9.55□□□□□ -0.88
CTNNA1-214ENST00000519116 POLR3AO14802 1390 aaPredicted RBP9.54□□□□□ -0.88
CTNNA1-214ENST00000519116 GIGYF1O75420 1035 aaPredicted RBP9.54□□□□□ -0.88
CTNNA1-214ENST00000519116 GCP02774 474 aa9.54□□□□□ -0.88
CTNNA1-214ENST00000519116 NLRP13Q86W25 1043 aa9.54□□□□□ -0.88
CTNNA1-214ENST00000519116 PROM2Q8N271 834 aa9.54□□□□□ -0.88
CTNNA1-214ENST00000519116 CAMTA1Q9Y6Y1 1673 aa9.54□□□□□ -0.88
CTNNA1-214ENST00000519116 NRKQ7Z2Y5 1582 aa9.54□□□□□ -0.88
CTNNA1-214ENST00000519116 ACEP12821 1306 aa9.54□□□□□ -0.88
CTNNA1-214ENST00000519116 PLEKHG3A1L390 1219 aa9.53□□□□□ -0.88
CTNNA1-214ENST00000519116 CD44P16070 742 aaKnown RBP9.53□□□□□ -0.88
CTNNA1-214ENST00000519116 SLC15A2Q16348 729 aa9.53□□□□□ -0.88
CTNNA1-214ENST00000519116 TXNRD1Q16881 649 aa9.53□□□□□ -0.88
CTNNA1-214ENST00000519116 CDCA7Q9BWT1 371 aaPredicted RBP9.53□□□□□ -0.88
CTNNA1-214ENST00000519116 CDK19Q9BWU1 502 aa9.53□□□□□ -0.88
CTNNA1-214ENST00000519116 CREBZFQ9NS37 354 aa9.53□□□□□ -0.88
CTNNA1-214ENST00000519116 CCDC61Q9Y6R9 512 aa9.53□□□□□ -0.88
CTNNA1-214ENST00000519116 UTRNP46939 3433 aa9.53□□□□□ -0.88
CTNNA1-214ENST00000519116 CRB1P82279 1406 aa9.53□□□□□ -0.88
CTNNA1-214ENST00000519116 ADGRB1O14514 1584 aa9.53□□□□□ -0.88
CTNNA1-214ENST00000519116 RGPD8O14715 1765 aaPredicted RBP9.52□□□□□ -0.88
CTNNA1-214ENST00000519116 BCL9O00512 1426 aa9.52□□□□□ -0.89
CTNNA1-214ENST00000519116 STAC3Q96MF2 364 aa9.52□□□□□ -0.89
CTNNA1-214ENST00000519116 ARXQ96QS3 562 aa9.52□□□□□ -0.89
CTNNA1-214ENST00000519116 SGIP1Q9BQI5 828 aa9.52□□□□□ -0.89
CTNNA1-214ENST00000519116 COL5A2P05997 1499 aaPredicted RBP9.52□□□□□ -0.89
CTNNA1-214ENST00000519116 MAP3K5Q99683 1374 aa9.51□□□□□ -0.89
CTNNA1-214ENST00000519116 CRYBG1Q9Y4K1 1723 aa9.51□□□□□ -0.89
CTNNA1-214ENST00000519116 SPDYE4A6NLX3 237 aa9.51□□□□□ -0.89
CTNNA1-214ENST00000519116 POTEIP0CG38 1075 aa9.51□□□□□ -0.89
CTNNA1-214ENST00000519116 GPR162Q16538 588 aa9.51□□□□□ -0.89
CTNNA1-214ENST00000519116 TOM1L2Q6ZVM7 507 aa9.51□□□□□ -0.89
CTNNA1-214ENST00000519116 PTF1AQ7RTS3 328 aa9.51□□□□□ -0.89
CTNNA1-214ENST00000519116 AATKQ6ZMQ8 1374 aa9.5□□□□□ -0.89
CTNNA1-214ENST00000519116 MARCH10Q8NA82 808 aaPredicted RBP9.5□□□□□ -0.89
CTNNA1-214ENST00000519116 ZBTB7CA1YPR0 619 aa9.49□□□□□ -0.89
CTNNA1-214ENST00000519116 KDM2AQ9Y2K7 1162 aa9.49□□□□□ -0.89
CTNNA1-214ENST00000519116 BRD4O60885 1362 aaPredicted RBP9.49□□□□□ -0.89
CTNNA1-214ENST00000519116 CASZ1Q86V15 1759 aa9.48□□□□□ -0.89
CTNNA1-214ENST00000519116 DCAF11Q8TEB1 546 aa9.48□□□□□ -0.89
CTNNA1-214ENST00000519116 WDR17Q8IZU2 1322 aa9.48□□□□□ -0.89
CTNNA1-214ENST00000519116 PHRF1Q9P1Y6 1649 aaKnown RBP9.48□□□□□ -0.89
CTNNA1-214ENST00000519116 MYOM1P52179 1685 aa9.47□□□□□ -0.89
CTNNA1-214ENST00000519116 LMO7Q8WWI1 1683 aa9.47□□□□□ -0.89
CTNNA1-214ENST00000519116 PARP4Q9UKK3 1724 aaKnown RBP9.47□□□□□ -0.89
CTNNA1-214ENST00000519116 RGPD3A6NKT7 1758 aaPredicted RBP9.47□□□□□ -0.89
CTNNA1-214ENST00000519116 RGPD4Q7Z3J3 1758 aa9.47□□□□□ -0.89
CTNNA1-214ENST00000519116 EXOC5O00471 708 aa9.46□□□□□ -0.9
CTNNA1-214ENST00000519116 NLRP6P59044 892 aa9.46□□□□□ -0.9
CTNNA1-214ENST00000519116 CARD10Q9BWT7 1032 aa9.46□□□□□ -0.9
CTNNA1-214ENST00000519116 PEAK1Q9H792 1746 aa9.45□□□□□ -0.9
CTNNA1-214ENST00000519116 CSB-PGBD3P0DP91 1061 aa9.45□□□□□ -0.9
CTNNA1-214ENST00000519116 POLD1P28340 1107 aa9.45□□□□□ -0.9
CTNNA1-214ENST00000519116 SRPK2P78362 688 aaKnown RBP9.45□□□□□ -0.9
CTNNA1-214ENST00000519116 SLC16A10Q8TF71 515 aa9.45□□□□□ -0.9
CTNNA1-214ENST00000519116 PELP1Q8IZL8 1130 aaKnown RBP9.44□□□□□ -0.9
CTNNA1-214ENST00000519116 AXIN2Q9Y2T1 843 aa9.44□□□□□ -0.9
CTNNA1-214ENST00000519116 PPIP5K1Q6PFW1 1433 aa9.43□□□□□ -0.9
CTNNA1-214ENST00000519116 GRIN3BO60391 1043 aa9.43□□□□□ -0.9
CTNNA1-214ENST00000519116 LHX8Q68G74 356 aa9.43□□□□□ -0.9
CTNNA1-214ENST00000519116 ARHGEF25Q86VW2 580 aa9.43□□□□□ -0.9
CTNNA1-214ENST00000519116 KLHL34Q8N239 644 aa9.43□□□□□ -0.9
CTNNA1-214ENST00000519116 ZNF579Q8NAF0 562 aaKnown RBP9.43□□□□□ -0.9
CTNNA1-214ENST00000519116 LRRC37A3O60309 1634 aa9.42□□□□□ -0.9
CTNNA1-214ENST00000519116 CCDC7Q96M83 1385 aa9.42□□□□□ -0.9
CTNNA1-214ENST00000519116 CEP350Q5VT06 3117 aa9.42□□□□□ -0.9
CTNNA1-214ENST00000519116 ZNF827Q17R98 1081 aa9.42□□□□□ -0.9
CTNNA1-214ENST00000519116 KCNH5Q8NCM2 988 aa9.42□□□□□ -0.9
CTNNA1-214ENST00000519116 ACSBG1Q96GR2 724 aa9.42□□□□□ -0.9
CTNNA1-214ENST00000519116 ITSN1Q15811 1721 aa9.42□□□□□ -0.9
CTNNA1-214ENST00000519116 USP6P35125 1406 aa9.41□□□□□ -0.9
CTNNA1-214ENST00000519116 CPSF1Q10570 1443 aaKnown RBP9.41□□□□□ -0.9
CTNNA1-214ENST00000519116 MNX1P50219 401 aaPredicted RBP9.41□□□□□ -0.9
CTNNA1-214ENST00000519116 CLCN6P51797 869 aa9.41□□□□□ -0.9
CTNNA1-214ENST00000519116 CABP2Q9NPB3 220 aa9.41□□□□□ -0.9
CTNNA1-214ENST00000519116 CABP1Q9NZU7 370 aa9.41□□□□□ -0.9
CTNNA1-214ENST00000519116 SLIT3O75094 1523 aa9.41□□□□□ -0.9
CTNNA1-214ENST00000519116 TNS2Q63HR2 1409 aa9.4□□□□□ -0.9
CTNNA1-214ENST00000519116 HSPA6P17066 643 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms