RNA–Protein interactions for RNA: ENST00000517935.1

CDH12P3-201, Transcript of cadherin 12 pseudogene 3, humanhuman

BASIC

Gene CDH12P3, Length 295 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P3-201ENST00000517935 KIF12Q96FN5 646 aa7.96□□□□□ -1.14
CDH12P3-201ENST00000517935 KIF1AQ12756 1690 aa7.95□□□□□ -1.14
CDH12P3-201ENST00000517935 ABCA3Q99758 1704 aa7.95□□□□□ -1.14
CDH12P3-201ENST00000517935 KIF3CO14782 793 aa7.95□□□□□ -1.14
CDH12P3-201ENST00000517935 TOMM70O94826 608 aa7.95□□□□□ -1.14
CDH12P3-201ENST00000517935 PELP1Q8IZL8 1130 aaKnown RBP7.95□□□□□ -1.14
CDH12P3-201ENST00000517935 MAP3K13O43283 966 aa7.94□□□□□ -1.14
CDH12P3-201ENST00000517935 RTN4Q9NQC3 1192 aaKnown RBP7.94□□□□□ -1.14
CDH12P3-201ENST00000517935 PCDHB13Q9Y5F0 798 aa7.94□□□□□ -1.14
CDH12P3-201ENST00000517935 GABBR2O75899 941 aa7.93□□□□□ -1.14
CDH12P3-201ENST00000517935 DHX57Q6P158 1386 aaKnown RBP7.93□□□□□ -1.14
CDH12P3-201ENST00000517935 ANKRD30AQ9BXX3 1397 aa7.93□□□□□ -1.14
CDH12P3-201ENST00000517935 WDR90Q96KV7 1748 aa7.92□□□□□ -1.14
CDH12P3-201ENST00000517935 YBX3P16989 372 aaKnown RBP eCLIP7.92□□□□□ -1.14
CDH12P3-201ENST00000517935 ZNF526Q8TF50 670 aaPredicted RBP7.92□□□□□ -1.14
CDH12P3-201ENST00000517935 TNS2Q63HR2 1409 aa7.92□□□□□ -1.14
CDH12P3-201ENST00000517935 LMOD2Q6P5Q4 547 aa7.91□□□□□ -1.14
CDH12P3-201ENST00000517935 ZNF467Q7Z7K2 595 aaPredicted RBP7.91□□□□□ -1.14
CDH12P3-201ENST00000517935 SLC16A10Q8TF71 515 aa7.91□□□□□ -1.14
CDH12P3-201ENST00000517935 NAIPQ13075 1403 aa7.91□□□□□ -1.14
CDH12P3-201ENST00000517935 TNRC18O15417 2968 aaPredicted RBP7.9□□□□□ -1.14
CDH12P3-201ENST00000517935 OVOS2A0A0G2JMS6 1433 aa7.9□□□□□ -1.14
CDH12P3-201ENST00000517935 OVOS2A0A0J9YW53 1432 aa7.9□□□□□ -1.14
CDH12P3-201ENST00000517935 OVOS2Q6IE36 1432 aa7.9□□□□□ -1.14
CDH12P3-201ENST00000517935 POLD1P28340 1107 aa7.9□□□□□ -1.14
CDH12P3-201ENST00000517935 FAM161AQ3B820 660 aa7.9□□□□□ -1.14
CDH12P3-201ENST00000517935 MS4A3Q96HJ5 214 aa7.9□□□□□ -1.14
CDH12P3-201ENST00000517935 GALR2O43603 387 aaPredicted RBP7.89□□□□□ -1.15
CDH12P3-201ENST00000517935 TXNRD1Q16881 649 aa7.89□□□□□ -1.15
CDH12P3-201ENST00000517935 PRDM11Q9NQV5 511 aa7.89□□□□□ -1.15
CDH12P3-201ENST00000517935 THRAP3Q9Y2W1 955 aaKnown RBP7.89□□□□□ -1.15
CDH12P3-201ENST00000517935 ZNF326Q5BKZ1 582 aaKnown RBP7.88□□□□□ -1.15
CDH12P3-201ENST00000517935 IFNL1Q8IU54 200 aa7.88□□□□□ -1.15
CDH12P3-201ENST00000517935 TCP11L2Q8N4U5 519 aa7.88□□□□□ -1.15
CDH12P3-201ENST00000517935 NLGN2Q8NFZ4 835 aa7.88□□□□□ -1.15
CDH12P3-201ENST00000517935 RBM46Q8TBY0 533 aaKnown RBP7.88□□□□□ -1.15
CDH12P3-201ENST00000517935 PCDHB8Q9UN66 801 aa7.88□□□□□ -1.15
CDH12P3-201ENST00000517935 PHF8Q9UPP1 1060 aa7.88□□□□□ -1.15
CDH12P3-201ENST00000517935 BCL9O00512 1426 aa7.87□□□□□ -1.15
CDH12P3-201ENST00000517935 TECPR2O15040 1411 aa7.87□□□□□ -1.15
CDH12P3-201ENST00000517935 NUTM2FA1L443 756 aa7.87□□□□□ -1.15
CDH12P3-201ENST00000517935 VGFO15240 615 aaPredicted RBP7.87□□□□□ -1.15
CDH12P3-201ENST00000517935 HSPA1AP0DMV8 641 aaKnown RBP7.87□□□□□ -1.15
CDH12P3-201ENST00000517935 HSPA1BP0DMV9 641 aaKnown RBP7.87□□□□□ -1.15
CDH12P3-201ENST00000517935 MLLT1Q03111 559 aaPredicted RBP7.87□□□□□ -1.15
CDH12P3-201ENST00000517935 FSTL1Q12841 308 aa7.87□□□□□ -1.15
CDH12P3-201ENST00000517935 TAOK2Q9UL54 1235 aa7.87□□□□□ -1.15
CDH12P3-201ENST00000517935 NRXN1Q9ULB1 1477 aa7.87□□□□□ -1.15
CDH12P3-201ENST00000517935 DAPK1P53355 1430 aa7.86□□□□□ -1.15
CDH12P3-201ENST00000517935 PEAK1Q9H792 1746 aa7.86□□□□□ -1.15
CDH12P3-201ENST00000517935 E9PCH4 1651 aa7.86□□□□□ -1.15
CDH12P3-201ENST00000517935 RIOK3O14730 519 aaKnown RBP7.86□□□□□ -1.15
CDH12P3-201ENST00000517935 RGL2O15211 777 aa7.86□□□□□ -1.15
CDH12P3-201ENST00000517935 USP35Q9P2H5 1018 aa7.86□□□□□ -1.15
CDH12P3-201ENST00000517935 COL24A1Q17RW2 1714 aa7.86□□□□□ -1.15
CDH12P3-201ENST00000517935 TULP4Q9NRJ4 1543 aa7.85□□□□□ -1.15
CDH12P3-201ENST00000517935 RGS19P49795 217 aa7.85□□□□□ -1.15
CDH12P3-201ENST00000517935 ARHGEF28Q8N1W1 1705 aaKnown RBP7.85□□□□□ -1.15
CDH12P3-201ENST00000517935 FMN2Q9NZ56 1722 aa7.85□□□□□ -1.15
CDH12P3-201ENST00000517935 PARP4Q9UKK3 1724 aaKnown RBP7.85□□□□□ -1.15
CDH12P3-201ENST00000517935 ATP7BP35670 1465 aa7.85□□□□□ -1.15
CDH12P3-201ENST00000517935 EVA1CP58658 441 aa7.84□□□□□ -1.15
CDH12P3-201ENST00000517935 HTRA3P83110 453 aa7.84□□□□□ -1.15
CDH12P3-201ENST00000517935 STRN4Q9NRL3 753 aa7.84□□□□□ -1.15
CDH12P3-201ENST00000517935 ANKRD50Q9ULJ7 1429 aa7.84□□□□□ -1.15
CDH12P3-201ENST00000517935 SBF2Q86WG5 1849 aa7.83□□□□□ -1.16
CDH12P3-201ENST00000517935 PDAP1Q13442 181 aaKnown RBP7.83□□□□□ -1.16
CDH12P3-201ENST00000517935 PMFBP1Q8TBY8 1022 aa7.83□□□□□ -1.16
CDH12P3-201ENST00000517935 RNF25Q96BH1 459 aaPredicted RBP7.83□□□□□ -1.16
CDH12P3-201ENST00000517935 DCBLD2Q96PD2 775 aa7.83□□□□□ -1.16
CDH12P3-201ENST00000517935 PRDM10Q9NQV6 1147 aa7.83□□□□□ -1.16
CDH12P3-201ENST00000517935 SSH2Q76I76 1423 aa7.83□□□□□ -1.16
CDH12P3-201ENST00000517935 USP19O94966 1318 aa7.82□□□□□ -1.16
CDH12P3-201ENST00000517935 PTF1AQ7RTS3 328 aa7.82□□□□□ -1.16
CDH12P3-201ENST00000517935 KIAA0232Q92628 1395 aa7.82□□□□□ -1.16
CDH12P3-201ENST00000517935 KIAA1210Q9ULL0 1709 aa7.81□□□□□ -1.16
CDH12P3-201ENST00000517935 TIE1P35590 1138 aa7.81□□□□□ -1.16
CDH12P3-201ENST00000517935 PSEN1P49768 467 aa7.81□□□□□ -1.16
CDH12P3-201ENST00000517935 CHIC2Q9UKJ5 165 aa7.81□□□□□ -1.16
CDH12P3-201ENST00000517935 CD2APQ9Y5K6 639 aa7.81□□□□□ -1.16
CDH12P3-201ENST00000517935 ALS2Q96Q42 1657 aa7.81□□□□□ -1.16
CDH12P3-201ENST00000517935 TRPM3Q9HCF6 1732 aaPredicted RBP7.81□□□□□ -1.16
CDH12P3-201ENST00000517935 CRYBG1Q9Y4K1 1723 aa7.81□□□□□ -1.16
CDH12P3-201ENST00000517935 TOPAZ1Q8N9V7 1692 aa7.8□□□□□ -1.16
CDH12P3-201ENST00000517935 DDB1Q16531 1140 aa7.8□□□□□ -1.16
CDH12P3-201ENST00000517935 LARP1Q6PKG0 1096 aaKnown RBP7.8□□□□□ -1.16
CDH12P3-201ENST00000517935 WAPLQ7Z5K2 1190 aa7.8□□□□□ -1.16
CDH12P3-201ENST00000517935 C16orf71Q8IYS4 520 aaPredicted RBP7.8□□□□□ -1.16
CDH12P3-201ENST00000517935 TMEM106CQ9BVX2 250 aa7.8□□□□□ -1.16
CDH12P3-201ENST00000517935 TRPC6Q9Y210 931 aa7.8□□□□□ -1.16
CDH12P3-201ENST00000517935 PAPPAQ13219 1627 aa7.8□□□□□ -1.16
CDH12P3-201ENST00000517935 BRD4O60885 1362 aaPredicted RBP7.8□□□□□ -1.16
CDH12P3-201ENST00000517935 GPRASP1Q5JY77 1395 aa7.8□□□□□ -1.16
CDH12P3-201ENST00000517935 ABCC11Q96J66 1382 aa7.8□□□□□ -1.16
CDH12P3-201ENST00000517935 RPGRIP1LQ68CZ1 1315 aa7.79□□□□□ -1.16
CDH12P3-201ENST00000517935 CLTCL1P53675 1640 aa7.79□□□□□ -1.16
CDH12P3-201ENST00000517935 CHRNA2Q15822 529 aa7.79□□□□□ -1.16
CDH12P3-201ENST00000517935 SIRT1Q96EB6 747 aa7.79□□□□□ -1.16
CDH12P3-201ENST00000517935 ABHD8Q96I13 439 aa7.78□□□□□ -1.16
CDH12P3-201ENST00000517935 ANKRD30BQ9BXX2 1392 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms