RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 PIK3C2AO00443 1686 aa16.67■□□□□ 0.26
TRAPPC9-203ENST00000517667 TOM1L2Q6ZVM7 507 aa16.67■□□□□ 0.26
TRAPPC9-203ENST00000517667 ANO8Q9HCE9 1232 aaPredicted RBP16.67■□□□□ 0.26
TRAPPC9-203ENST00000517667 ZBTB7CA1YPR0 619 aa16.66■□□□□ 0.26
TRAPPC9-203ENST00000517667 WDR17Q8IZU2 1322 aa16.66■□□□□ 0.26
TRAPPC9-203ENST00000517667 NLRP6P59044 892 aa16.65■□□□□ 0.26
TRAPPC9-203ENST00000517667 CENPJQ9HC77 1338 aaPredicted RBP16.65■□□□□ 0.26
TRAPPC9-203ENST00000517667 CHD4Q14839 1912 aa16.64■□□□□ 0.26
TRAPPC9-203ENST00000517667 CPSF1Q10570 1443 aaKnown RBP16.63■□□□□ 0.25
TRAPPC9-203ENST00000517667 ZBTB7AO95365 584 aa16.63■□□□□ 0.25
TRAPPC9-203ENST00000517667 CABP2Q9NPB3 220 aa16.63■□□□□ 0.25
TRAPPC9-203ENST00000517667 STK32BQ9NY57 414 aa16.63■□□□□ 0.25
TRAPPC9-203ENST00000517667 RGPD5Q99666 1765 aa16.63■□□□□ 0.25
TRAPPC9-203ENST00000517667 PTGER2P43116 358 aa16.62■□□□□ 0.25
TRAPPC9-203ENST00000517667 MARCH10Q8NA82 808 aaPredicted RBP16.62■□□□□ 0.25
TRAPPC9-203ENST00000517667 ABCC6O95255 1503 aa16.61■□□□□ 0.25
TRAPPC9-203ENST00000517667 TRPM1Q7Z4N2 1603 aa16.61■□□□□ 0.25
TRAPPC9-203ENST00000517667 PROM2Q8N271 834 aa16.61■□□□□ 0.25
TRAPPC9-203ENST00000517667 ZNF784Q8NCA9 323 aaPredicted RBP16.61■□□□□ 0.25
TRAPPC9-203ENST00000517667 PDGFDQ9GZP0 370 aaPredicted RBP16.61■□□□□ 0.25
TRAPPC9-203ENST00000517667 NHSQ6T4R5 1651 aa16.61■□□□□ 0.25
TRAPPC9-203ENST00000517667 SLC15A2Q16348 729 aa16.6■□□□□ 0.25
TRAPPC9-203ENST00000517667 TXNRD1Q16881 649 aa16.6■□□□□ 0.25
TRAPPC9-203ENST00000517667 NBPF1Q3BBV0 1214 aa16.6■□□□□ 0.25
TRAPPC9-203ENST00000517667 PTF1AQ7RTS3 328 aa16.6■□□□□ 0.25
TRAPPC9-203ENST00000517667 KCNH5Q8NCM2 988 aa16.6■□□□□ 0.25
TRAPPC9-203ENST00000517667 CABP1Q9NZU7 370 aa16.6■□□□□ 0.25
TRAPPC9-203ENST00000517667 CARD10Q9BWT7 1032 aa16.59■□□□□ 0.25
TRAPPC9-203ENST00000517667 MTFR1LQ9H019 292 aa16.59■□□□□ 0.25
TRAPPC9-203ENST00000517667 AXIN2Q9Y2T1 843 aa16.59■□□□□ 0.25
TRAPPC9-203ENST00000517667 SYT17Q9BSW7 474 aa16.58■□□□□ 0.24
TRAPPC9-203ENST00000517667 FHDC1Q9C0D6 1143 aaPredicted RBP16.58■□□□□ 0.24
TRAPPC9-203ENST00000517667 ATF5Q9Y2D1 282 aaPredicted RBP16.58■□□□□ 0.24
TRAPPC9-203ENST00000517667 CCDC7Q96M83 1385 aa16.58■□□□□ 0.24
TRAPPC9-203ENST00000517667 TNS2Q63HR2 1409 aa16.58■□□□□ 0.24
TRAPPC9-203ENST00000517667 EXOC5O00471 708 aa16.57■□□□□ 0.24
TRAPPC9-203ENST00000517667 CSB-PGBD3P0DP91 1061 aa16.57■□□□□ 0.24
TRAPPC9-203ENST00000517667 ARHGEF25Q86VW2 580 aa16.57■□□□□ 0.24
TRAPPC9-203ENST00000517667 PAPPAQ13219 1627 aa16.56■□□□□ 0.24
TRAPPC9-203ENST00000517667 NFAT5O94916 1531 aa16.55■□□□□ 0.24
TRAPPC9-203ENST00000517667 MAP3K5Q99683 1374 aa16.55■□□□□ 0.24
TRAPPC9-203ENST00000517667 EVC2Q86UK5 1308 aa16.55■□□□□ 0.24
TRAPPC9-203ENST00000517667 ZNF692Q9BU19 519 aaPredicted RBP16.55■□□□□ 0.24
TRAPPC9-203ENST00000517667 TTC21AQ8NDW8 1320 aa16.54■□□□□ 0.24
TRAPPC9-203ENST00000517667 SGIP1Q9BQI5 828 aa16.54■□□□□ 0.24
TRAPPC9-203ENST00000517667 TTC21BQ7Z4L5 1316 aa16.53■□□□□ 0.24
TRAPPC9-203ENST00000517667 BTAF1O14981 1849 aa16.53■□□□□ 0.24
TRAPPC9-203ENST00000517667 USP54Q70EL1 1684 aa16.53■□□□□ 0.24
TRAPPC9-203ENST00000517667 ARXQ96QS3 562 aa16.52■□□□□ 0.24
TRAPPC9-203ENST00000517667 QSER1Q2KHR3 1735 aa16.52■□□□□ 0.24
TRAPPC9-203ENST00000517667 MON2Q7Z3U7 1717 aa16.52■□□□□ 0.24
TRAPPC9-203ENST00000517667 SENP3-EIF4A1A0A087X0R7 540 aa16.51■□□□□ 0.23
TRAPPC9-203ENST00000517667 LTN1O94822 1766 aa16.51■□□□□ 0.23
TRAPPC9-203ENST00000517667 SOX12O15370 315 aa16.5■□□□□ 0.23
TRAPPC9-203ENST00000517667 C1QTNF8P60827 252 aa16.5■□□□□ 0.23
TRAPPC9-203ENST00000517667 KTN1Q86UP2 1357 aaKnown RBP16.48■□□□□ 0.23
TRAPPC9-203ENST00000517667 COL24A1Q17RW2 1714 aa16.48■□□□□ 0.23
TRAPPC9-203ENST00000517667 ERBB3P21860 1342 aa16.47■□□□□ 0.23
TRAPPC9-203ENST00000517667 ACSBG1Q96GR2 724 aa16.46■□□□□ 0.23
TRAPPC9-203ENST00000517667 IL2RBP14784 551 aa16.45■□□□□ 0.22
TRAPPC9-203ENST00000517667 GPR162Q16538 588 aa16.45■□□□□ 0.22
TRAPPC9-203ENST00000517667 SLC16A10Q8TF71 515 aa16.45■□□□□ 0.22
TRAPPC9-203ENST00000517667 FAM208AQ9UK61 1670 aaKnown RBP16.45■□□□□ 0.22
TRAPPC9-203ENST00000517667 KAT6BQ8WYB5 2073 aa16.44■□□□□ 0.22
TRAPPC9-203ENST00000517667 USP31Q70CQ4 1352 aa16.44■□□□□ 0.22
TRAPPC9-203ENST00000517667 NLRP2Q9NX02 1062 aa16.44■□□□□ 0.22
TRAPPC9-203ENST00000517667 GOLGB1Q14789 3259 aaKnown RBP16.44■□□□□ 0.22
TRAPPC9-203ENST00000517667 POLD1P28340 1107 aa16.43■□□□□ 0.22
TRAPPC9-203ENST00000517667 ZNF827Q17R98 1081 aa16.43■□□□□ 0.22
TRAPPC9-203ENST00000517667 ROCK2O75116 1388 aaKnown RBP16.42■□□□□ 0.22
TRAPPC9-203ENST00000517667 GIGYF1O75420 1035 aaPredicted RBP16.42■□□□□ 0.22
TRAPPC9-203ENST00000517667 SLC27A3Q5K4L6 730 aa16.42■□□□□ 0.22
TRAPPC9-203ENST00000517667 TUBGCP6Q96RT7 1819 aa16.42■□□□□ 0.22
TRAPPC9-203ENST00000517667 AKT1S1Q96B36 256 aa16.4■□□□□ 0.22
TRAPPC9-203ENST00000517667 LRRC4BQ9NT99 713 aa16.4■□□□□ 0.22
TRAPPC9-203ENST00000517667 SBNO2Q9Y2G9 1366 aa16.39■□□□□ 0.21
TRAPPC9-203ENST00000517667 LY75O60449 1722 aa16.39■□□□□ 0.21
TRAPPC9-203ENST00000517667 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.39■□□□□ 0.21
TRAPPC9-203ENST00000517667 KLHL34Q8N239 644 aa16.39■□□□□ 0.21
TRAPPC9-203ENST00000517667 ANKRD24Q8TF21 1146 aa16.39■□□□□ 0.21
TRAPPC9-203ENST00000517667 L3MBTL2Q969R5 705 aa16.39■□□□□ 0.21
TRAPPC9-203ENST00000517667 SHANK3Q9BYB0 1731 aa16.39■□□□□ 0.21
TRAPPC9-203ENST00000517667 DOT1LQ8TEK3 1739 aa16.38■□□□□ 0.21
TRAPPC9-203ENST00000517667 PNPLA7Q6ZV29 1317 aa16.37■□□□□ 0.21
TRAPPC9-203ENST00000517667 CD163L1Q9NR16 1453 aa16.36■□□□□ 0.21
TRAPPC9-203ENST00000517667 PELP1Q8IZL8 1130 aaKnown RBP16.36■□□□□ 0.21
TRAPPC9-203ENST00000517667 TFCP2L1Q9NZI6 479 aa16.36■□□□□ 0.21
TRAPPC9-203ENST00000517667 EDC4Q6P2E9 1401 aaKnown RBP16.36■□□□□ 0.21
TRAPPC9-203ENST00000517667 IFFO2Q5TF58 517 aa16.35■□□□□ 0.21
TRAPPC9-203ENST00000517667 HDGFL2Q7Z4V5 671 aaPredicted RBP16.35■□□□□ 0.21
TRAPPC9-203ENST00000517667 NME9Q86XW9 330 aa16.35■□□□□ 0.21
TRAPPC9-203ENST00000517667 ANKRD36BQ8N2N9 1353 aa16.35■□□□□ 0.21
TRAPPC9-203ENST00000517667 CEP350Q5VT06 3117 aa16.34■□□□□ 0.21
TRAPPC9-203ENST00000517667 GRIN3BO60391 1043 aa16.34■□□□□ 0.21
TRAPPC9-203ENST00000517667 DDX54Q8TDD1 881 aaKnown RBP16.33■□□□□ 0.2
TRAPPC9-203ENST00000517667 NLGN2Q8NFZ4 835 aa16.32■□□□□ 0.2
TRAPPC9-203ENST00000517667 SYTL4Q96C24 671 aaPredicted RBP16.32■□□□□ 0.2
TRAPPC9-203ENST00000517667 TMC1Q8TDI8 760 aa16.31■□□□□ 0.2
TRAPPC9-203ENST00000517667 IP6K1Q92551 441 aa16.31■□□□□ 0.2
TRAPPC9-203ENST00000517667 TERF2IPQ9NYB0 399 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms