RNA–Protein interactions for RNA: ENST00000516759.1

RNU7-28P-201, Transcript of RNA, U7 small nuclear 28 pseudogene, humanhuman

BASIC

Gene RNU7-28P, Length 62 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU7-28P-201ENST00000516759 INTS6LQ5JSJ4 861 aaKnown RBP3.41□□□□□ -1.86
RNU7-28P-201ENST00000516759 KCTD15Q96SI1 283 aaPredicted RBP3.41□□□□□ -1.86
RNU7-28P-201ENST00000516759 DACH1Q9UI36 760 aa3.41□□□□□ -1.86
RNU7-28P-201ENST00000516759 SCTRP47872 440 aa3.4□□□□□ -1.87
RNU7-28P-201ENST00000516759 PRR20EP86478 221 aa3.4□□□□□ -1.87
RNU7-28P-201ENST00000516759 PRR20CP86479 221 aa3.4□□□□□ -1.87
RNU7-28P-201ENST00000516759 PRR20DP86480 221 aa3.4□□□□□ -1.87
RNU7-28P-201ENST00000516759 PRR20BP86481 221 aa3.4□□□□□ -1.87
RNU7-28P-201ENST00000516759 PRR20AP86496 221 aa3.4□□□□□ -1.87
RNU7-28P-201ENST00000516759 WASHC4Q2M389 1173 aa3.4□□□□□ -1.87
RNU7-28P-201ENST00000516759 CFAP70Q5T0N1 1121 aa3.4□□□□□ -1.87
RNU7-28P-201ENST00000516759 TRAF7Q6Q0C0 670 aa3.4□□□□□ -1.87
RNU7-28P-201ENST00000516759 DZIP3Q86Y13 1208 aaKnown RBP3.4□□□□□ -1.87
RNU7-28P-201ENST00000516759 DEPDC4Q8N2C3 294 aa3.4□□□□□ -1.87
RNU7-28P-201ENST00000516759 KDF1Q8NAX2 398 aaPredicted RBP3.4□□□□□ -1.87
RNU7-28P-201ENST00000516759 SNIP1Q8TAD8 396 aaKnown RBP3.4□□□□□ -1.87
RNU7-28P-201ENST00000516759 ZFAND3Q9H8U3 227 aa3.4□□□□□ -1.87
RNU7-28P-201ENST00000516759 TFIP11Q9UBB9 837 aaKnown RBP3.4□□□□□ -1.87
RNU7-28P-201ENST00000516759 CHIC2Q9UKJ5 165 aa3.4□□□□□ -1.87
RNU7-28P-201ENST00000516759 PDZRN3Q9UPQ7 1066 aa3.4□□□□□ -1.87
RNU7-28P-201ENST00000516759 ERVH48-1M5A8F1 160 aa3.39□□□□□ -1.87
RNU7-28P-201ENST00000516759 GFRA3O60609 400 aa3.39□□□□□ -1.87
RNU7-28P-201ENST00000516759 LILRA1O75019 489 aa3.39□□□□□ -1.87
RNU7-28P-201ENST00000516759 RGS20O76081 388 aa3.39□□□□□ -1.87
RNU7-28P-201ENST00000516759 FSHRP23945 695 aa3.39□□□□□ -1.87
RNU7-28P-201ENST00000516759 CBLBQ13191 982 aa3.39□□□□□ -1.87
RNU7-28P-201ENST00000516759 CDCA8Q53HL2 280 aa3.39□□□□□ -1.87
RNU7-28P-201ENST00000516759 VASH1Q7L8A9 365 aaPredicted RBP3.39□□□□□ -1.87
RNU7-28P-201ENST00000516759 CCDC82Q8N4S0 544 aa3.39□□□□□ -1.87
RNU7-28P-201ENST00000516759 MPNDQ8N594 471 aa3.39□□□□□ -1.87
RNU7-28P-201ENST00000516759 MAP4K5Q9Y4K4 846 aa3.39□□□□□ -1.87
RNU7-28P-201ENST00000516759 PALM3A6NDB9 673 aaPredicted RBP3.38□□□□□ -1.87
RNU7-28P-201ENST00000516759 ADH1CP00326 375 aa3.38□□□□□ -1.87
RNU7-28P-201ENST00000516759 TIMP2P16035 220 aa3.38□□□□□ -1.87
RNU7-28P-201ENST00000516759 EIF4G2P78344 907 aaKnown RBP eCLIP3.38□□□□□ -1.87
RNU7-28P-201ENST00000516759 NNTQ13423 1086 aa3.38□□□□□ -1.87
RNU7-28P-201ENST00000516759 PPP1R26Q5T8A7 1209 aaPredicted RBP3.38□□□□□ -1.87
RNU7-28P-201ENST00000516759 CYP4X1Q8N118 509 aa3.38□□□□□ -1.87
RNU7-28P-201ENST00000516759 ITPKCQ96DU7 683 aa3.38□□□□□ -1.87
RNU7-28P-201ENST00000516759 CALR3Q96L12 384 aaKnown RBP3.38□□□□□ -1.87
RNU7-28P-201ENST00000516759 PPP1R12CQ9BZL4 782 aa3.38□□□□□ -1.87
RNU7-28P-201ENST00000516759 PRM3Q9NNZ6 103 aa3.38□□□□□ -1.87
RNU7-28P-201ENST00000516759 TTC24A2A3L6 582 aaPredicted RBP3.37□□□□□ -1.87
RNU7-28P-201ENST00000516759 CARNS1A5YM72 827 aa3.37□□□□□ -1.87
RNU7-28P-201ENST00000516759 ZBTB7BO15156 539 aaPredicted RBP3.37□□□□□ -1.87
RNU7-28P-201ENST00000516759 ST8SIA5O15466 376 aa3.37□□□□□ -1.87
RNU7-28P-201ENST00000516759 DKK1O94907 266 aa3.37□□□□□ -1.87
RNU7-28P-201ENST00000516759 SKIP12755 728 aa3.37□□□□□ -1.87
RNU7-28P-201ENST00000516759 RFX1P22670 979 aa3.37□□□□□ -1.87
RNU7-28P-201ENST00000516759 SEMA3FQ13275 785 aa3.37□□□□□ -1.87
RNU7-28P-201ENST00000516759 KANK4Q5T7N3 995 aaPredicted RBP3.37□□□□□ -1.87
RNU7-28P-201ENST00000516759 ZNF784Q8NCA9 323 aaPredicted RBP3.37□□□□□ -1.87
RNU7-28P-201ENST00000516759 PNMA1Q8ND90 353 aa3.37□□□□□ -1.87
RNU7-28P-201ENST00000516759 SLC10A4Q96EP9 437 aa3.37□□□□□ -1.87
RNU7-28P-201ENST00000516759 AGBL1Q96MI9 1066 aa3.37□□□□□ -1.87
RNU7-28P-201ENST00000516759 ARID3AQ99856 593 aa3.37□□□□□ -1.87
RNU7-28P-201ENST00000516759 KIAA1024Q9UPX6 916 aa3.37□□□□□ -1.87
RNU7-28P-201ENST00000516759 MAFBQ9Y5Q3 323 aaPredicted RBP3.37□□□□□ -1.87
RNU7-28P-201ENST00000516759 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.36□□□□□ -1.87
RNU7-28P-201ENST00000516759 FAM187AA6NFU0 413 aa3.36□□□□□ -1.87
RNU7-28P-201ENST00000516759 USP17L5A8MUK1 530 aa3.36□□□□□ -1.87
RNU7-28P-201ENST00000516759 POTECB2RU33 542 aa3.36□□□□□ -1.87
RNU7-28P-201ENST00000516759 MYT1Q01538 1121 aa3.36□□□□□ -1.87
RNU7-28P-201ENST00000516759 RNF135Q8IUD6 432 aa3.36□□□□□ -1.87
RNU7-28P-201ENST00000516759 CCDC116Q8IYX3 515 aa3.36□□□□□ -1.87
RNU7-28P-201ENST00000516759 PLPP7Q8NBV4 271 aa3.36□□□□□ -1.87
RNU7-28P-201ENST00000516759 GAS2L2Q8NHY3 880 aa3.36□□□□□ -1.87
RNU7-28P-201ENST00000516759 OSBPL3Q9H4L5 887 aa3.36□□□□□ -1.87
RNU7-28P-201ENST00000516759 CYLDQ9NQC7 956 aa3.36□□□□□ -1.87
RNU7-28P-201ENST00000516759 PCDHB11Q9Y5F2 797 aa3.36□□□□□ -1.87
RNU7-28P-201ENST00000516759 PCDHGA11Q9Y5H2 935 aa3.36□□□□□ -1.87
RNU7-28P-201ENST00000516759 USP17L3A6NCW0 530 aa3.35□□□□□ -1.87
RNU7-28P-201ENST00000516759 USP17L4A6NCW7 530 aa3.35□□□□□ -1.87
RNU7-28P-201ENST00000516759 NRG2O14511 850 aaPredicted RBP3.35□□□□□ -1.87
RNU7-28P-201ENST00000516759 ATP9BO43861 1147 aa3.35□□□□□ -1.87
RNU7-28P-201ENST00000516759 LGR5O75473 907 aa3.35□□□□□ -1.87
RNU7-28P-201ENST00000516759 ZIC2O95409 532 aaPredicted RBP3.35□□□□□ -1.87
RNU7-28P-201ENST00000516759 AVPP01185 164 aa3.35□□□□□ -1.87
RNU7-28P-201ENST00000516759 LMOD1P29536 600 aaPredicted RBP3.35□□□□□ -1.87
RNU7-28P-201ENST00000516759 SOX11P35716 441 aa3.35□□□□□ -1.87
RNU7-28P-201ENST00000516759 WDR4P57081 412 aaKnown RBP3.35□□□□□ -1.87
RNU7-28P-201ENST00000516759 CLDN10P78369 228 aa3.35□□□□□ -1.87
RNU7-28P-201ENST00000516759 NR5A1Q13285 461 aa3.35□□□□□ -1.87
RNU7-28P-201ENST00000516759 NCOA4Q13772 614 aa3.35□□□□□ -1.87
RNU7-28P-201ENST00000516759 OXLD1Q5BKU9 147 aa3.35□□□□□ -1.87
RNU7-28P-201ENST00000516759 USP17L2Q6R6M4 530 aa3.35□□□□□ -1.87
RNU7-28P-201ENST00000516759 USP17L1Q7RTZ2 530 aa3.35□□□□□ -1.87
RNU7-28P-201ENST00000516759 TRIM46Q7Z4K8 759 aa3.35□□□□□ -1.87
RNU7-28P-201ENST00000516759 AAASQ9NRG9 546 aa3.35□□□□□ -1.87
RNU7-28P-201ENST00000516759 SLAIN2Q9P270 581 aa3.35□□□□□ -1.87
RNU7-28P-201ENST00000516759 BMP1P13497 986 aa3.34□□□□□ -1.87
RNU7-28P-201ENST00000516759 ERVK-9P63128 1117 aa3.34□□□□□ -1.87
RNU7-28P-201ENST00000516759 SLFNL1Q499Z3 407 aa3.34□□□□□ -1.87
RNU7-28P-201ENST00000516759 CRTC2Q53ET0 693 aaPredicted RBP3.34□□□□□ -1.87
RNU7-28P-201ENST00000516759 Q6ZVU0 165 aa3.34□□□□□ -1.87
RNU7-28P-201ENST00000516759 WASF2Q9Y6W5 498 aa3.34□□□□□ -1.87
RNU7-28P-201ENST00000516759 TMEM229AB2RXF0 380 aa3.33□□□□□ -1.88
RNU7-28P-201ENST00000516759 CAPN5O15484 640 aaPredicted RBP3.33□□□□□ -1.88
RNU7-28P-201ENST00000516759 DGAT1O75907 488 aa3.33□□□□□ -1.88
RNU7-28P-201ENST00000516759 SCNN1DP51172 638 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms