RNA–Protein interactions for RNA: ENST00000516419.1

SNORA48.9-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 162 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.9-201ENST00000516419 PALM3A6NDB9 673 aaPredicted RBP12.36□□□□□ -0.43
SNORA48.9-201ENST00000516419 ESPNB1AK53 854 aa12.36□□□□□ -0.43
SNORA48.9-201ENST00000516419 PIK3CDO00329 1044 aa12.36□□□□□ -0.43
SNORA48.9-201ENST00000516419 GIGYF1O75420 1035 aaPredicted RBP12.36□□□□□ -0.43
SNORA48.9-201ENST00000516419 FOXC1Q12948 553 aa12.36□□□□□ -0.43
SNORA48.9-201ENST00000516419 TBC1D9Q6ZT07 1266 aa12.36□□□□□ -0.43
SNORA48.9-201ENST00000516419 KCTD15Q96SI1 283 aaPredicted RBP12.36□□□□□ -0.43
SNORA48.9-201ENST00000516419 TFIP11Q9UBB9 837 aaKnown RBP12.36□□□□□ -0.43
SNORA48.9-201ENST00000516419 ATP9BO43861 1147 aa12.35□□□□□ -0.43
SNORA48.9-201ENST00000516419 ARID5BQ14865 1188 aa12.35□□□□□ -0.43
SNORA48.9-201ENST00000516419 CCDC125Q86Z20 511 aa12.35□□□□□ -0.43
SNORA48.9-201ENST00000516419 SEPT12Q8IYM1 358 aa12.35□□□□□ -0.43
SNORA48.9-201ENST00000516419 PKD2L1Q9P0L9 805 aa12.35□□□□□ -0.43
SNORA48.9-201ENST00000516419 SKIP12755 728 aa12.34□□□□□ -0.43
SNORA48.9-201ENST00000516419 TLL2Q9Y6L7 1015 aa12.34□□□□□ -0.43
SNORA48.9-201ENST00000516419 CFAP70Q5T0N1 1121 aa12.33□□□□□ -0.44
SNORA48.9-201ENST00000516419 CHIC2Q9UKJ5 165 aa12.33□□□□□ -0.44
SNORA48.9-201ENST00000516419 GDF9O60383 454 aa12.32□□□□□ -0.44
SNORA48.9-201ENST00000516419 MAP7D1Q3KQU3 841 aa12.32□□□□□ -0.44
SNORA48.9-201ENST00000516419 MAFBQ9Y5Q3 323 aaPredicted RBP12.32□□□□□ -0.44
SNORA48.9-201ENST00000516419 ADH1CP00326 375 aa12.31□□□□□ -0.44
SNORA48.9-201ENST00000516419 LMOD1P29536 600 aaPredicted RBP12.31□□□□□ -0.44
SNORA48.9-201ENST00000516419 GRM5P41594 1212 aa12.31□□□□□ -0.44
SNORA48.9-201ENST00000516419 PLPP7Q8NBV4 271 aa12.31□□□□□ -0.44
SNORA48.9-201ENST00000516419 LZTS3O60299 673 aaPredicted RBP12.3□□□□□ -0.44
SNORA48.9-201ENST00000516419 NR5A1Q13285 461 aa12.3□□□□□ -0.44
SNORA48.9-201ENST00000516419 INTS6LQ5JSJ4 861 aaKnown RBP12.3□□□□□ -0.44
SNORA48.9-201ENST00000516419 SNIP1Q8TAD8 396 aaKnown RBP12.3□□□□□ -0.44
SNORA48.9-201ENST00000516419 USP17L5A8MUK1 530 aa12.29□□□□□ -0.44
SNORA48.9-201ENST00000516419 PLEKHM2Q8IWE5 1019 aa12.29□□□□□ -0.44
SNORA48.9-201ENST00000516419 CCDC85AQ96PX6 553 aaPredicted RBP12.29□□□□□ -0.44
SNORA48.9-201ENST00000516419 ALDH1A1P00352 501 aa12.28□□□□□ -0.44
SNORA48.9-201ENST00000516419 RFX1P22670 979 aa12.28□□□□□ -0.44
SNORA48.9-201ENST00000516419 FSHRP23945 695 aa12.28□□□□□ -0.44
SNORA48.9-201ENST00000516419 TRAF7Q6Q0C0 670 aa12.28□□□□□ -0.44
SNORA48.9-201ENST00000516419 DOLKQ9UPQ8 538 aa12.28□□□□□ -0.44
SNORA48.9-201ENST00000516419 USP17L3A6NCW0 530 aa12.27□□□□□ -0.45
SNORA48.9-201ENST00000516419 USP17L4A6NCW7 530 aa12.27□□□□□ -0.45
SNORA48.9-201ENST00000516419 PRR20EP86478 221 aa12.27□□□□□ -0.45
SNORA48.9-201ENST00000516419 PRR20CP86479 221 aa12.27□□□□□ -0.45
SNORA48.9-201ENST00000516419 PRR20DP86480 221 aa12.27□□□□□ -0.45
SNORA48.9-201ENST00000516419 PRR20BP86481 221 aa12.27□□□□□ -0.45
SNORA48.9-201ENST00000516419 PRR20AP86496 221 aa12.27□□□□□ -0.45
SNORA48.9-201ENST00000516419 DHX9Q08211 1270 aaKnown RBP12.27□□□□□ -0.45
SNORA48.9-201ENST00000516419 TSGA10IPQ3SY00 556 aa12.27□□□□□ -0.45
SNORA48.9-201ENST00000516419 USP17L2Q6R6M4 530 aa12.27□□□□□ -0.45
SNORA48.9-201ENST00000516419 USP17L1Q7RTZ2 530 aa12.27□□□□□ -0.45
SNORA48.9-201ENST00000516419 CYP4X1Q8N118 509 aa12.27□□□□□ -0.45
SNORA48.9-201ENST00000516419 PPP1R15AO75807 674 aaPredicted RBP12.26□□□□□ -0.45
SNORA48.9-201ENST00000516419 RAB15P59190 212 aa12.26□□□□□ -0.45
SNORA48.9-201ENST00000516419 TTC24A2A3L6 582 aaPredicted RBP12.25□□□□□ -0.45
SNORA48.9-201ENST00000516419 TNFRSF10AO00220 468 aa12.25□□□□□ -0.45
SNORA48.9-201ENST00000516419 TRIM67Q6ZTA4 783 aa12.25□□□□□ -0.45
SNORA48.9-201ENST00000516419 TRIM52Q96A61 297 aa12.25□□□□□ -0.45
SNORA48.9-201ENST00000516419 TOR4AQ9NXH8 423 aa12.25□□□□□ -0.45
SNORA48.9-201ENST00000516419 PCDHB11Q9Y5F2 797 aa12.25□□□□□ -0.45
SNORA48.9-201ENST00000516419 WASF2Q9Y6W5 498 aa12.25□□□□□ -0.45
SNORA48.9-201ENST00000516419 ERVH48-1M5A8F1 160 aa12.24□□□□□ -0.45
SNORA48.9-201ENST00000516419 NCOA4Q13772 614 aa12.24□□□□□ -0.45
SNORA48.9-201ENST00000516419 EML3Q32P44 896 aa12.24□□□□□ -0.45
SNORA48.9-201ENST00000516419 CCDC116Q8IYX3 515 aa12.24□□□□□ -0.45
SNORA48.9-201ENST00000516419 PBXIP1Q96AQ6 731 aa12.24□□□□□ -0.45
SNORA48.9-201ENST00000516419 SRPK2P78362 688 aaKnown RBP12.23□□□□□ -0.45
SNORA48.9-201ENST00000516419 DEPDC4Q8N2C3 294 aa12.23□□□□□ -0.45
SNORA48.9-201ENST00000516419 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.22□□□□□ -0.45
SNORA48.9-201ENST00000516419 SIRT1Q96EB6 747 aa12.22□□□□□ -0.45
SNORA48.9-201ENST00000516419 CDCA7Q9BWT1 371 aaPredicted RBP12.22□□□□□ -0.45
SNORA48.9-201ENST00000516419 VRTNQ9H8Y1 702 aa12.22□□□□□ -0.45
SNORA48.9-201ENST00000516419 USP4Q13107 963 aa12.21□□□□□ -0.45
SNORA48.9-201ENST00000516419 NNTQ13423 1086 aa12.21□□□□□ -0.45
SNORA48.9-201ENST00000516419 OXLD1Q5BKU9 147 aa12.21□□□□□ -0.45
SNORA48.9-201ENST00000516419 ACIN1Q9UKV3 1341 aaKnown RBP12.2□□□□□ -0.46
SNORA48.9-201ENST00000516419 J3QL48 77 aa12.2□□□□□ -0.46
SNORA48.9-201ENST00000516419 NR3C2P08235 984 aa12.2□□□□□ -0.46
SNORA48.9-201ENST00000516419 KANK4Q5T7N3 995 aaPredicted RBP12.2□□□□□ -0.46
SNORA48.9-201ENST00000516419 ARXQ96QS3 562 aa12.2□□□□□ -0.46
SNORA48.9-201ENST00000516419 MKRN1Q9UHC7 482 aaKnown RBP12.2□□□□□ -0.46
SNORA48.9-201ENST00000516419 NOD1Q9Y239 953 aa12.2□□□□□ -0.46
SNORA48.9-201ENST00000516419 EMILIN1Q9Y6C2 1016 aa12.2□□□□□ -0.46
SNORA48.9-201ENST00000516419 ATP5J2-PTCD1G3V325 749 aa12.19□□□□□ -0.46
SNORA48.9-201ENST00000516419 PPP1R26Q5T8A7 1209 aaPredicted RBP12.19□□□□□ -0.46
SNORA48.9-201ENST00000516419 PGPEP1Q9NXJ5 209 aa12.19□□□□□ -0.46
SNORA48.9-201ENST00000516419 SMPD1P17405 629 aa12.18□□□□□ -0.46
SNORA48.9-201ENST00000516419 TRIM50Q86XT4 487 aa12.18□□□□□ -0.46
SNORA48.9-201ENST00000516419 TMPRSS4Q9NRS4 437 aa12.18□□□□□ -0.46
SNORA48.9-201ENST00000516419 MYCP01106 439 aaPredicted RBP12.17□□□□□ -0.46
SNORA48.9-201ENST00000516419 ERVK-9P63128 1117 aa12.17□□□□□ -0.46
SNORA48.9-201ENST00000516419 CC2D2BQ6DHV5 1058 aa12.17□□□□□ -0.46
SNORA48.9-201ENST00000516419 PDZRN3Q9UPQ7 1066 aa12.17□□□□□ -0.46
SNORA48.9-201ENST00000516419 MYT1Q01538 1121 aa12.16□□□□□ -0.46
SNORA48.9-201ENST00000516419 CDCA8Q53HL2 280 aa12.16□□□□□ -0.46
SNORA48.9-201ENST00000516419 ZNF784Q8NCA9 323 aaPredicted RBP12.16□□□□□ -0.46
SNORA48.9-201ENST00000516419 ESF1Q9H501 851 aaKnown RBP12.16□□□□□ -0.46
SNORA48.9-201ENST00000516419 ATG7O95352 703 aa12.14□□□□□ -0.47
SNORA48.9-201ENST00000516419 SCTRP47872 440 aa12.14□□□□□ -0.47
SNORA48.9-201ENST00000516419 ATP1A2P50993 1020 aa12.14□□□□□ -0.47
SNORA48.9-201ENST00000516419 LARP1Q6PKG0 1096 aaKnown RBP12.14□□□□□ -0.47
SNORA48.9-201ENST00000516419 CYLDQ9NQC7 956 aa12.14□□□□□ -0.47
SNORA48.9-201ENST00000516419 RASA1P20936 1047 aa12.13□□□□□ -0.47
SNORA48.9-201ENST00000516419 HOMEZQ8IX15 550 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms