RNA–Protein interactions for RNA: ENST00000516309.1

RNU6ATAC39P-201, Transcript of RNA, U6atac small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6ATAC39P, Length 149 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC39P-201ENST00000516309 EIF3JO75822 258 aaKnown RBP9.2□□□□□ -0.94
RNU6ATAC39P-201ENST00000516309 TIE1P35590 1138 aa9.2□□□□□ -0.94
RNU6ATAC39P-201ENST00000516309 USP46P62068 366 aa9.2□□□□□ -0.94
RNU6ATAC39P-201ENST00000516309 ZNF211Q13398 564 aaPredicted RBP9.2□□□□□ -0.94
RNU6ATAC39P-201ENST00000516309 HSP90AB2PQ58FF8 381 aa9.2□□□□□ -0.94
RNU6ATAC39P-201ENST00000516309 NT5DC4Q86YG4 428 aa9.2□□□□□ -0.94
RNU6ATAC39P-201ENST00000516309 DEPDC4Q8N2C3 294 aa9.2□□□□□ -0.94
RNU6ATAC39P-201ENST00000516309 CCDC136Q96JN2 1154 aa9.2□□□□□ -0.94
RNU6ATAC39P-201ENST00000516309 SPACA7Q96KW9 195 aa9.2□□□□□ -0.94
RNU6ATAC39P-201ENST00000516309 BRINP2Q9C0B6 783 aa9.2□□□□□ -0.94
RNU6ATAC39P-201ENST00000516309 CAPN10Q9HC96 672 aa9.2□□□□□ -0.94
RNU6ATAC39P-201ENST00000516309 KLHL42Q9P2K6 505 aa9.2□□□□□ -0.94
RNU6ATAC39P-201ENST00000516309 TTLL13PA6NNM8 815 aa9.19□□□□□ -0.94
RNU6ATAC39P-201ENST00000516309 ATP5J2-PTCD1G3V325 749 aa9.19□□□□□ -0.94
RNU6ATAC39P-201ENST00000516309 ITGAEP38570 1179 aa9.19□□□□□ -0.94
RNU6ATAC39P-201ENST00000516309 NR1H3Q13133 447 aa9.19□□□□□ -0.94
RNU6ATAC39P-201ENST00000516309 MTMR2Q13614 643 aa9.19□□□□□ -0.94
RNU6ATAC39P-201ENST00000516309 GNL2Q13823 731 aaKnown RBP9.19□□□□□ -0.94
RNU6ATAC39P-201ENST00000516309 ZCRB1Q8TBF4 217 aaKnown RBP9.19□□□□□ -0.94
RNU6ATAC39P-201ENST00000516309 NAP1L5Q96NT1 182 aaPredicted RBP9.19□□□□□ -0.94
RNU6ATAC39P-201ENST00000516309 TBX22Q9Y458 520 aa9.19□□□□□ -0.94
RNU6ATAC39P-201ENST00000516309 PARNO95453 639 aaKnown RBP9.18□□□□□ -0.94
RNU6ATAC39P-201ENST00000516309 RNF135Q8IUD6 432 aa9.18□□□□□ -0.94
RNU6ATAC39P-201ENST00000516309 TMEM87AQ8NBN3 555 aa9.18□□□□□ -0.94
RNU6ATAC39P-201ENST00000516309 PKNOX2Q96KN3 472 aa9.18□□□□□ -0.94
RNU6ATAC39P-201ENST00000516309 TGIF2Q9GZN2 237 aa9.18□□□□□ -0.94
RNU6ATAC39P-201ENST00000516309 ANO2Q9NQ90 1003 aa9.18□□□□□ -0.94
RNU6ATAC39P-201ENST00000516309 TERF2IPQ9NYB0 399 aa9.18□□□□□ -0.94
RNU6ATAC39P-201ENST00000516309 PPP1R3GB7ZBB8 358 aa9.17□□□□□ -0.94
RNU6ATAC39P-201ENST00000516309 NR6A1Q15406 480 aa9.17□□□□□ -0.94
RNU6ATAC39P-201ENST00000516309 APBB1IPQ7Z5R6 666 aaPredicted RBP9.17□□□□□ -0.94
RNU6ATAC39P-201ENST00000516309 RGL4Q8IZJ4 473 aa9.17□□□□□ -0.94
RNU6ATAC39P-201ENST00000516309 PDCD7Q8N8D1 485 aaKnown RBP9.17□□□□□ -0.94
RNU6ATAC39P-201ENST00000516309 PMFBP1Q8TBY8 1022 aa9.17□□□□□ -0.94
RNU6ATAC39P-201ENST00000516309 VTI1AQ96AJ9 217 aa9.17□□□□□ -0.94
RNU6ATAC39P-201ENST00000516309 ZSWIM4Q9H7M6 989 aa9.17□□□□□ -0.94
RNU6ATAC39P-201ENST00000516309 NOP58Q9Y2X3 529 aaKnown RBP9.17□□□□□ -0.94
RNU6ATAC39P-201ENST00000516309 HOXA2O43364 376 aa9.16□□□□□ -0.94
RNU6ATAC39P-201ENST00000516309 C21orf2O43822 256 aa9.16□□□□□ -0.94
RNU6ATAC39P-201ENST00000516309 SOGA3Q5TF21 947 aa9.16□□□□□ -0.94
RNU6ATAC39P-201ENST00000516309 RDH13Q8NBN7 331 aa9.16□□□□□ -0.94
RNU6ATAC39P-201ENST00000516309 LAS1LQ9Y4W2 734 aaKnown RBP9.16□□□□□ -0.94
RNU6ATAC39P-201ENST00000516309 CCDC194A0A1B0GVG4 234 aa9.15□□□□□ -0.94
RNU6ATAC39P-201ENST00000516309 PRSS12P56730 875 aa9.15□□□□□ -0.94
RNU6ATAC39P-201ENST00000516309 PSME1Q06323 249 aa9.15□□□□□ -0.94
RNU6ATAC39P-201ENST00000516309 DPYDQ12882 1025 aa9.15□□□□□ -0.94
RNU6ATAC39P-201ENST00000516309 FAM50AQ14320 339 aaKnown RBP9.15□□□□□ -0.94
RNU6ATAC39P-201ENST00000516309 C6orf132Q5T0Z8 1188 aa9.15□□□□□ -0.94
RNU6ATAC39P-201ENST00000516309 ASTLQ6HA08 431 aaPredicted RBP9.15□□□□□ -0.94
RNU6ATAC39P-201ENST00000516309 METTL16Q86W50 562 aaKnown RBP9.15□□□□□ -0.94
RNU6ATAC39P-201ENST00000516309 GPATCH11Q8N954 259 aa9.15□□□□□ -0.94
RNU6ATAC39P-201ENST00000516309 MS4A3Q96HJ5 214 aa9.15□□□□□ -0.94
RNU6ATAC39P-201ENST00000516309 PIF1Q9H611 641 aa9.15□□□□□ -0.94
RNU6ATAC39P-201ENST00000516309 FAN1Q9Y2M0 1017 aa9.15□□□□□ -0.94
RNU6ATAC39P-201ENST00000516309 XPCQ01831 940 aaPredicted RBP9.14□□□□□ -0.95
RNU6ATAC39P-201ENST00000516309 RNF187Q5TA31 235 aaPredicted RBP9.14□□□□□ -0.95
RNU6ATAC39P-201ENST00000516309 RNF34Q969K3 372 aa9.14□□□□□ -0.95
RNU6ATAC39P-201ENST00000516309 MRS2Q9HD23 443 aa9.14□□□□□ -0.95
RNU6ATAC39P-201ENST00000516309 SCUBE2Q9NQ36 999 aa9.14□□□□□ -0.95
RNU6ATAC39P-201ENST00000516309 METTL5Q9NRN9 209 aaKnown RBP9.14□□□□□ -0.95
RNU6ATAC39P-201ENST00000516309 CHPF2Q9P2E5 772 aa9.14□□□□□ -0.95
RNU6ATAC39P-201ENST00000516309 PCDHGC3Q9UN70 934 aa9.14□□□□□ -0.95
RNU6ATAC39P-201ENST00000516309 TRIM35Q9UPQ4 493 aa9.14□□□□□ -0.95
RNU6ATAC39P-201ENST00000516309 TAS1R3Q7RTX0 852 aa9.13□□□□□ -0.95
RNU6ATAC39P-201ENST00000516309 CCAR1Q8IX12 1150 aaKnown RBP9.13□□□□□ -0.95
RNU6ATAC39P-201ENST00000516309 SLC39A7Q92504 469 aa9.13□□□□□ -0.95
RNU6ATAC39P-201ENST00000516309 JPH4Q96JJ6 628 aa9.13□□□□□ -0.95
RNU6ATAC39P-201ENST00000516309 PRDM10Q9NQV6 1147 aa9.13□□□□□ -0.95
RNU6ATAC39P-201ENST00000516309 CFAP99D6REC4 459 aa9.12□□□□□ -0.95
RNU6ATAC39P-201ENST00000516309 ATMINO43313 823 aaPredicted RBP9.12□□□□□ -0.95
RNU6ATAC39P-201ENST00000516309 PRMT3O60678 531 aa9.12□□□□□ -0.95
RNU6ATAC39P-201ENST00000516309 DNAJB2P25686 324 aa9.12□□□□□ -0.95
RNU6ATAC39P-201ENST00000516309 DNAJA1P31689 397 aaKnown RBP9.12□□□□□ -0.95
RNU6ATAC39P-201ENST00000516309 NCOA4Q13772 614 aa9.12□□□□□ -0.95
RNU6ATAC39P-201ENST00000516309 LDLRAD1Q5T700 205 aa9.12□□□□□ -0.95
RNU6ATAC39P-201ENST00000516309 NLGN1Q8N2Q7 840 aa9.12□□□□□ -0.95
RNU6ATAC39P-201ENST00000516309 FAM174AQ8TBP5 190 aa9.12□□□□□ -0.95
RNU6ATAC39P-201ENST00000516309 CDCA7LQ96GN5 454 aa9.12□□□□□ -0.95
RNU6ATAC39P-201ENST00000516309 P4HBP07237 508 aaKnown RBP9.11□□□□□ -0.95
RNU6ATAC39P-201ENST00000516309 TCEAL1Q15170 157 aa9.11□□□□□ -0.95
RNU6ATAC39P-201ENST00000516309 TMEM92Q6UXU6 159 aa9.11□□□□□ -0.95
RNU6ATAC39P-201ENST00000516309 GMLQ99445 158 aa9.11□□□□□ -0.95
RNU6ATAC39P-201ENST00000516309 EYA1Q99502 592 aa9.11□□□□□ -0.95
RNU6ATAC39P-201ENST00000516309 CXXC1Q9P0U4 656 aaPredicted RBP9.11□□□□□ -0.95
RNU6ATAC39P-201ENST00000516309 POTEFA5A3E0 1075 aa9.1□□□□□ -0.95
RNU6ATAC39P-201ENST00000516309 ZBBXA8MT70 800 aa9.1□□□□□ -0.95
RNU6ATAC39P-201ENST00000516309 CREB3O43889 395 aa9.1□□□□□ -0.95
RNU6ATAC39P-201ENST00000516309 FBXO45P0C2W1 286 aa9.1□□□□□ -0.95
RNU6ATAC39P-201ENST00000516309 ZEB1P37275 1124 aaPredicted RBP9.1□□□□□ -0.95
RNU6ATAC39P-201ENST00000516309 FKBP4Q02790 459 aaKnown RBP eCLIP9.1□□□□□ -0.95
RNU6ATAC39P-201ENST00000516309 RBL2Q08999 1139 aa9.1□□□□□ -0.95
RNU6ATAC39P-201ENST00000516309 SF3B2Q13435 895 aaKnown RBP9.1□□□□□ -0.95
RNU6ATAC39P-201ENST00000516309 OGFOD1Q8N543 542 aa9.1□□□□□ -0.95
RNU6ATAC39P-201ENST00000516309 C6orf229H3BNL8 230 aa9.09□□□□□ -0.95
RNU6ATAC39P-201ENST00000516309 FANCCQ00597 558 aa9.09□□□□□ -0.95
RNU6ATAC39P-201ENST00000516309 GUCA2AQ02747 115 aa9.09□□□□□ -0.95
RNU6ATAC39P-201ENST00000516309 SLFNL1Q499Z3 407 aa9.09□□□□□ -0.95
RNU6ATAC39P-201ENST00000516309 TMTC2Q8N394 836 aa9.09□□□□□ -0.95
RNU6ATAC39P-201ENST00000516309 GTF3C2Q8WUA4 911 aaPredicted RBP9.09□□□□□ -0.95
RNU6ATAC39P-201ENST00000516309 PMM1Q92871 262 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms