RNA–Protein interactions for RNA: ENST00000510557.5

LIN54-209, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 2 BASIC

Gene LIN54, Length 2,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-209ENST00000510557 NFE2L2Q16236 605 aa23.97■■□□□ 1.43
LIN54-209ENST00000510557 REREQ9P2R6 1566 aa23.97■■□□□ 1.43
LIN54-209ENST00000510557 NUCB1Q02818 461 aa23.96■■□□□ 1.43
LIN54-209ENST00000510557 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.95■■□□□ 1.435e-6■■■□□ 15.5
LIN54-209ENST00000510557 MFAP1P55081 439 aaKnown RBP23.95■■□□□ 1.42
LIN54-209ENST00000510557 AGLP35573 1532 aa23.94■■□□□ 1.42
LIN54-209ENST00000510557 GNAI1P63096 354 aa23.94■■□□□ 1.42
LIN54-209ENST00000510557 A2ML1A8K2U0 1454 aa23.93■■□□□ 1.42
LIN54-209ENST00000510557 IFT57Q9NWB7 429 aa23.93■■□□□ 1.42
LIN54-209ENST00000510557 EDC4Q6P2E9 1401 aaKnown RBP23.93■■□□□ 1.42
LIN54-209ENST00000510557 LMOD3Q0VAK6 560 aa23.92■■□□□ 1.42
LIN54-209ENST00000510557 GCC1Q96CN9 775 aa23.92■■□□□ 1.42
LIN54-209ENST00000510557 RIMS2Q9UQ26 1411 aa23.91■■□□□ 1.42
LIN54-209ENST00000510557 CHD1LQ86WJ1 897 aa23.91■■□□□ 1.42
LIN54-209ENST00000510557 AATKQ6ZMQ8 1374 aa23.91■■□□□ 1.42
LIN54-209ENST00000510557 SPATA31D1Q6ZQQ2 1576 aa23.9■■□□□ 1.42
LIN54-209ENST00000510557 MAP2P11137 1827 aaKnown RBP23.9■■□□□ 1.42
LIN54-209ENST00000510557 CPSF1Q10570 1443 aaKnown RBP23.9■■□□□ 1.42
LIN54-209ENST00000510557 CDK12Q9NYV4 1490 aaPredicted RBP23.9■■□□□ 1.42
LIN54-209ENST00000510557 VAMP4O75379 141 aa23.9■■□□□ 1.42
LIN54-209ENST00000510557 WAPLQ7Z5K2 1190 aa23.9■■□□□ 1.42
LIN54-209ENST00000510557 PIK3R4Q99570 1358 aa23.89■■□□□ 1.42
LIN54-209ENST00000510557 HSCBQ8IWL3 235 aa23.89■■□□□ 1.41
LIN54-209ENST00000510557 MRPL50Q8N5N7 158 aaKnown RBP23.89■■□□□ 1.41
LIN54-209ENST00000510557 PTCH1Q13635 1447 aa23.88■■□□□ 1.41
LIN54-209ENST00000510557 SETD1AO15047 1707 aaKnown RBP23.88■■□□□ 1.41
LIN54-209ENST00000510557 WASLO00401 505 aaPredicted RBP23.88■■□□□ 1.41
LIN54-209ENST00000510557 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.88■■□□□ 1.41
LIN54-209ENST00000510557 ZBTB7BO15156 539 aaPredicted RBP23.87■■□□□ 1.41
LIN54-209ENST00000510557 IL13P35225 146 aa23.87■■□□□ 1.41
LIN54-209ENST00000510557 RBM25P49756 843 aaKnown RBP23.87■■□□□ 1.41
LIN54-209ENST00000510557 RIMBP3CA6NJZ7 1639 aa23.87■■□□□ 1.41
LIN54-209ENST00000510557 RIMBP3BA6NNM3 1639 aa23.87■■□□□ 1.41
LIN54-209ENST00000510557 RIMBP3Q9UFD9 1639 aa23.87■■□□□ 1.41
LIN54-209ENST00000510557 BMP2KLQ5H9B9 411 aa23.86■■□□□ 1.41
LIN54-209ENST00000510557 PHACTR3Q96KR7 559 aa23.86■■□□□ 1.41
LIN54-209ENST00000510557 HMOX1P09601 288 aa23.86■■□□□ 1.41
LIN54-209ENST00000510557 ZNF853P0CG23 659 aa23.86■■□□□ 1.41
LIN54-209ENST00000510557 KIAA1211Q6ZU35 1233 aa23.86■■□□□ 1.41
LIN54-209ENST00000510557 ZNF692Q9BU19 519 aaPredicted RBP23.86■■□□□ 1.41
LIN54-209ENST00000510557 SIRT1Q96EB6 747 aa23.85■■□□□ 1.41
LIN54-209ENST00000510557 LNPKQ9C0E8 428 aa23.85■■□□□ 1.41
LIN54-209ENST00000510557 NCOA3Q9Y6Q9 1424 aa23.84■■□□□ 1.41
LIN54-209ENST00000510557 SNX21Q969T3 373 aa23.84■■□□□ 1.41
LIN54-209ENST00000510557 COG3Q96JB2 828 aa23.84■■□□□ 1.41
LIN54-209ENST00000510557 CFAP44Q96MT7 982 aa23.84■■□□□ 1.41
LIN54-209ENST00000510557 HDGFP51858 240 aaKnown RBP23.83■■□□□ 1.41
LIN54-209ENST00000510557 SKOR2Q2VWA4 1001 aaPredicted RBP23.83■■□□□ 1.41
LIN54-209ENST00000510557 PTMSP20962 102 aa23.82■■□□□ 1.4
LIN54-209ENST00000510557 API5Q9BZZ5 524 aaKnown RBP23.82■■□□□ 1.4
LIN54-209ENST00000510557 EMILIN1Q9Y6C2 1016 aa23.82■■□□□ 1.4
LIN54-209ENST00000510557 FAM69CQ0P6D2 419 aa23.82■■□□□ 1.4
LIN54-209ENST00000510557 ABCC4O15439 1325 aa23.82■■□□□ 1.4
LIN54-209ENST00000510557 CCDC173Q0VFZ6 552 aa23.81■■□□□ 1.4
LIN54-209ENST00000510557 GAS2L3Q86XJ1 694 aa23.81■■□□□ 1.4
LIN54-209ENST00000510557 MBIPQ9NS73 344 aa23.81■■□□□ 1.4
LIN54-209ENST00000510557 FBLN1P23142 703 aa23.81■■□□□ 1.4
LIN54-209ENST00000510557 TWISTNBQ3B726 338 aaPredicted RBP23.81■■□□□ 1.4
LIN54-209ENST00000510557 ANKRD45Q5TZF3 282 aa23.81■■□□□ 1.4
LIN54-209ENST00000510557 GBP4Q96PP9 640 aa23.81■■□□□ 1.4
LIN54-209ENST00000510557 KIF24Q5T7B8 1368 aa23.81■■□□□ 1.4
LIN54-209ENST00000510557 HAP1P54257 671 aaPredicted RBP23.8■■□□□ 1.4
LIN54-209ENST00000510557 CCDC61Q9Y6R9 512 aa23.8■■□□□ 1.4
LIN54-209ENST00000510557 DDIT3P35638 169 aa23.8■■□□□ 1.4
LIN54-209ENST00000510557 NME9Q86XW9 330 aa23.8■■□□□ 1.4
LIN54-209ENST00000510557 NUDT16Q96DE0 195 aaKnown RBP23.8■■□□□ 1.4
LIN54-209ENST00000510557 TSPYL6Q8N831 410 aa23.78■■□□□ 1.4
LIN54-209ENST00000510557 THUMPD2Q9BTF0 503 aaKnown RBP23.78■■□□□ 1.4
LIN54-209ENST00000510557 PODXL2Q9NZ53 605 aa23.78■■□□□ 1.4
LIN54-209ENST00000510557 CIZ1Q9ULV3 898 aaPredicted RBP23.78■■□□□ 1.4
LIN54-209ENST00000510557 ZSCAN30Q86W11 494 aa23.77■■□□□ 1.4
LIN54-209ENST00000510557 TNPO1Q92973 898 aaKnown RBP23.77■■□□□ 1.4
LIN54-209ENST00000510557 MON2Q7Z3U7 1717 aa23.77■■□□□ 1.4
LIN54-209ENST00000510557 KNDC1Q76NI1 1749 aa23.77■■□□□ 1.4
LIN54-209ENST00000510557 OFD1O75665 1012 aa23.77■■□□□ 1.4
LIN54-209ENST00000510557 TERF1P54274 439 aa23.77■■□□□ 1.4
LIN54-209ENST00000510557 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.77■■□□□ 1.4
LIN54-209ENST00000510557 PPP1R9BQ96SB3 815 aa23.77■■□□□ 1.4
LIN54-209ENST00000510557 DIP2BQ9P265 1576 aa23.76■■□□□ 1.39
LIN54-209ENST00000510557 NRXN3Q9Y4C0 1643 aa23.76■■□□□ 1.39
LIN54-209ENST00000510557 CYB5RLQ6IPT4 315 aa23.76■■□□□ 1.39
LIN54-209ENST00000510557 TECPR2O15040 1411 aa23.75■■□□□ 1.39
LIN54-209ENST00000510557 ANP32BQ92688 251 aaKnown RBP23.75■■□□□ 1.39
LIN54-209ENST00000510557 MAP7D2Q96T17 732 aa23.75■■□□□ 1.39
LIN54-209ENST00000510557 METP08581 1390 aa23.74■■□□□ 1.39
LIN54-209ENST00000510557 MSNP26038 577 aaKnown RBP23.73■■□□□ 1.39
LIN54-209ENST00000510557 TXNDC2Q86VQ3 553 aa23.73■■□□□ 1.39
LIN54-209ENST00000510557 ELL2O00472 640 aaPredicted RBP23.72■■□□□ 1.39
LIN54-209ENST00000510557 AKAP12Q02952 1782 aa23.72■■□□□ 1.39
LIN54-209ENST00000510557 DLG5Q8TDM6 1919 aa23.72■■□□□ 1.39
LIN54-209ENST00000510557 C8orf58Q8NAV2 365 aa23.72■■□□□ 1.39
LIN54-209ENST00000510557 ITSN1Q15811 1721 aa23.72■■□□□ 1.39
LIN54-209ENST00000510557 NASPP49321 788 aaPredicted RBP23.71■■□□□ 1.39
LIN54-209ENST00000510557 RAB3GAP1Q15042 981 aa23.71■■□□□ 1.39
LIN54-209ENST00000510557 C1orf115Q9H7X2 142 aa23.71■■□□□ 1.39
LIN54-209ENST00000510557 PRDM4Q9UKN5 801 aa23.71■■□□□ 1.39
LIN54-209ENST00000510557 C3P01024 1663 aa23.71■■□□□ 1.39
LIN54-209ENST00000510557 ESF1Q9H501 851 aaKnown RBP23.71■■□□□ 1.39
LIN54-209ENST00000510557 HSP90AB1P08238 724 aaKnown RBP23.7■■□□□ 1.38
LIN54-209ENST00000510557 SIRT2Q8IXJ6 389 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms