RNA–Protein interactions for RNA: ENST00000509384.5

LYSMD3-204, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 1,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-204ENST00000509384 SLIT3O75094 1523 aa16.62■□□□□ 0.25
LYSMD3-204ENST00000509384 PLEKHF1Q96S99 279 aa16.61■□□□□ 0.25
LYSMD3-204ENST00000509384 ZNF521Q96K83 1311 aa16.61■□□□□ 0.25
LYSMD3-204ENST00000509384 HOXC9P31274 260 aa16.6■□□□□ 0.25
LYSMD3-204ENST00000509384 RSPH6AQ9H0K4 717 aa16.6■□□□□ 0.25
LYSMD3-204ENST00000509384 ALS2Q96Q42 1657 aa16.59■□□□□ 0.25
LYSMD3-204ENST00000509384 GCP02774 474 aa16.59■□□□□ 0.25
LYSMD3-204ENST00000509384 NEFMP07197 916 aa16.59■□□□□ 0.25
LYSMD3-204ENST00000509384 HMOX1P09601 288 aa16.59■□□□□ 0.25
LYSMD3-204ENST00000509384 ARHGEF10O15013 1369 aa16.58■□□□□ 0.25
LYSMD3-204ENST00000509384 SPATA31A3Q5VYP0 1347 aa16.58■□□□□ 0.24
LYSMD3-204ENST00000509384 PLEKHG5O94827 1062 aa16.58■□□□□ 0.24
LYSMD3-204ENST00000509384 PRKAR2BP31323 418 aa16.58■□□□□ 0.24
LYSMD3-204ENST00000509384 NEUROD2Q15784 382 aa16.58■□□□□ 0.24
LYSMD3-204ENST00000509384 RRP7AQ9Y3A4 280 aaKnown RBP16.58■□□□□ 0.24
LYSMD3-204ENST00000509384 GOLGA2Q08379 1002 aa16.57■□□□□ 0.24
LYSMD3-204ENST00000509384 NCBP3Q53F19 620 aaKnown RBP16.57■□□□□ 0.24
LYSMD3-204ENST00000509384 CERKQ8TCT0 537 aa16.57■□□□□ 0.24
LYSMD3-204ENST00000509384 CDCA7LQ96GN5 454 aa16.57■□□□□ 0.24
LYSMD3-204ENST00000509384 SOS2Q07890 1332 aaPredicted RBP16.56■□□□□ 0.24
LYSMD3-204ENST00000509384 ZBTB7CA1YPR0 619 aa16.55■□□□□ 0.24
LYSMD3-204ENST00000509384 CCDC27Q2M243 656 aa16.55■□□□□ 0.24
LYSMD3-204ENST00000509384 WWC1Q8IX03 1113 aa16.55■□□□□ 0.24
LYSMD3-204ENST00000509384 IP6K1Q92551 441 aa16.55■□□□□ 0.24
LYSMD3-204ENST00000509384 TMPOP42166 694 aaKnown RBP16.55■□□□□ 0.24
LYSMD3-204ENST00000509384 SULT6B1Q6IMI4 303 aa16.55■□□□□ 0.24
LYSMD3-204ENST00000509384 ARHGEF25Q86VW2 580 aa16.55■□□□□ 0.24
LYSMD3-204ENST00000509384 MED1Q15648 1581 aaPredicted RBP16.54■□□□□ 0.24
LYSMD3-204ENST00000509384 SUPT16HQ9Y5B9 1047 aaKnown RBP16.53■□□□□ 0.24
LYSMD3-204ENST00000509384 IGSF1Q8N6C5 1336 aa16.52■□□□□ 0.24
LYSMD3-204ENST00000509384 PHRF1Q9P1Y6 1649 aaKnown RBP16.52■□□□□ 0.24
LYSMD3-204ENST00000509384 E9PSI1 815 aa16.52■□□□□ 0.24
LYSMD3-204ENST00000509384 NEFLP07196 543 aa16.52■□□□□ 0.24
LYSMD3-204ENST00000509384 AEBP1Q8IUX7 1158 aa16.52■□□□□ 0.24
LYSMD3-204ENST00000509384 LTV1Q96GA3 475 aaPredicted RBP16.52■□□□□ 0.24
LYSMD3-204ENST00000509384 RGPD1P0DJD0 1748 aa16.52■□□□□ 0.23
LYSMD3-204ENST00000509384 LTN1O94822 1766 aa16.52■□□□□ 0.23
LYSMD3-204ENST00000509384 SLFN5Q08AF3 891 aa16.51■□□□□ 0.23
LYSMD3-204ENST00000509384 EYA1Q99502 592 aa16.51■□□□□ 0.23
LYSMD3-204ENST00000509384 NHSL1Q5SYE7 1610 aa16.5■□□□□ 0.23
LYSMD3-204ENST00000509384 RIPK4P57078 832 aa16.5■□□□□ 0.23
LYSMD3-204ENST00000509384 NFE2L2Q16236 605 aa16.5■□□□□ 0.23
LYSMD3-204ENST00000509384 DUSP27Q5VZP5 1158 aa16.5■□□□□ 0.23
LYSMD3-204ENST00000509384 WDR63Q8IWG1 891 aa16.5■□□□□ 0.23
LYSMD3-204ENST00000509384 PIAS4Q8N2W9 510 aaPredicted RBP16.5■□□□□ 0.23
LYSMD3-204ENST00000509384 PHACTR3Q96KR7 559 aa16.5■□□□□ 0.23
LYSMD3-204ENST00000509384 ZC3H6P61129 1189 aaKnown RBP16.5■□□□□ 0.23
LYSMD3-204ENST00000509384 CABLES1Q8TDN4 633 aa16.5■□□□□ 0.23
LYSMD3-204ENST00000509384 KDRP35968 1356 aa16.49■□□□□ 0.23
LYSMD3-204ENST00000509384 TRMT2AQ8IZ69 625 aaKnown RBP16.48■□□□□ 0.23
LYSMD3-204ENST00000509384 SPINK5Q9NQ38 1064 aaPredicted RBP16.48■□□□□ 0.23
LYSMD3-204ENST00000509384 TRIM35Q9UPQ4 493 aa16.48■□□□□ 0.23
LYSMD3-204ENST00000509384 ROBO1Q9Y6N7 1651 aa16.47■□□□□ 0.23
LYSMD3-204ENST00000509384 LMOD3Q0VAK6 560 aa16.46■□□□□ 0.23
LYSMD3-204ENST00000509384 RCAN3Q9UKA8 241 aa16.46■□□□□ 0.23
LYSMD3-204ENST00000509384 CPDO75976 1380 aa16.46■□□□□ 0.23
LYSMD3-204ENST00000509384 AHDC1Q5TGY3 1603 aaPredicted RBP16.46■□□□□ 0.23
LYSMD3-204ENST00000509384 ANKRD24Q8TF21 1146 aa16.45■□□□□ 0.22
LYSMD3-204ENST00000509384 CRYBG1Q9Y4K1 1723 aa16.45■□□□□ 0.22
LYSMD3-204ENST00000509384 ABCC6O95255 1503 aa16.45■□□□□ 0.22
LYSMD3-204ENST00000509384 TOM1O60784 492 aa16.45■□□□□ 0.22
LYSMD3-204ENST00000509384 HAP1P54257 671 aaPredicted RBP16.45■□□□□ 0.22
LYSMD3-204ENST00000509384 MYH16Q9H6N6 1097 aa16.45■□□□□ 0.22
LYSMD3-204ENST00000509384 IL16Q14005 1332 aa16.44■□□□□ 0.22
LYSMD3-204ENST00000509384 KIAA0232Q92628 1395 aa16.44■□□□□ 0.22
LYSMD3-204ENST00000509384 FKBP8Q14318 412 aa16.44■□□□□ 0.22
LYSMD3-204ENST00000509384 USHBP1Q8N6Y0 703 aa16.44■□□□□ 0.22
LYSMD3-204ENST00000509384 AXIN2Q9Y2T1 843 aa16.44■□□□□ 0.22
LYSMD3-204ENST00000509384 CALD1Q05682 793 aaKnown RBP16.43■□□□□ 0.22
LYSMD3-204ENST00000509384 NBPF6Q5VWK0 638 aa16.43■□□□□ 0.22
LYSMD3-204ENST00000509384 LRRC59Q96AG4 307 aaKnown RBP16.43■□□□□ 0.22
LYSMD3-204ENST00000509384 NBPF4Q96M43 638 aa16.43■□□□□ 0.22
LYSMD3-204ENST00000509384 ERBB3P21860 1342 aa16.43■□□□□ 0.22
LYSMD3-204ENST00000509384 CHRNA2Q15822 529 aa16.42■□□□□ 0.22
LYSMD3-204ENST00000509384 RNF123Q5XPI4 1314 aa16.41■□□□□ 0.22
LYSMD3-204ENST00000509384 GAS2L2Q8NHY3 880 aa16.41■□□□□ 0.22
LYSMD3-204ENST00000509384 PRDM11Q9NQV5 511 aa16.4■□□□□ 0.22
LYSMD3-204ENST00000509384 NCAPD2Q15021 1401 aa16.4■□□□□ 0.22
LYSMD3-204ENST00000509384 PIP4K2BP78356 416 aa16.4■□□□□ 0.22
LYSMD3-204ENST00000509384 MTHFSDQ2M296 383 aaKnown RBP16.4■□□□□ 0.22
LYSMD3-204ENST00000509384 FANCIQ9NVI1 1328 aa16.39■□□□□ 0.21
LYSMD3-204ENST00000509384 UBAP1LF5GYI3 381 aa16.39■□□□□ 0.21
LYSMD3-204ENST00000509384 THUMPD2Q9BTF0 503 aaKnown RBP16.39■□□□□ 0.21
LYSMD3-204ENST00000509384 ABCA3Q99758 1704 aa16.38■□□□□ 0.21
LYSMD3-204ENST00000509384 CSB-PGBD3P0DP91 1061 aa16.38■□□□□ 0.21
LYSMD3-204ENST00000509384 RRP1P56182 461 aaKnown RBP16.38■□□□□ 0.21
LYSMD3-204ENST00000509384 IRX6P78412 446 aaPredicted RBP16.38■□□□□ 0.21
LYSMD3-204ENST00000509384 CAMTA1Q9Y6Y1 1673 aa16.37■□□□□ 0.21
LYSMD3-204ENST00000509384 COL18A1P39060 1754 aa16.37■□□□□ 0.21
LYSMD3-204ENST00000509384 FAM83GA6ND36 823 aa16.37■□□□□ 0.21
LYSMD3-204ENST00000509384 TSR2Q969E8 191 aaKnown RBP16.37■□□□□ 0.21
LYSMD3-204ENST00000509384 RTF1Q92541 710 aaKnown RBP16.36■□□□□ 0.21
LYSMD3-204ENST00000509384 IFT57Q9NWB7 429 aa16.36■□□□□ 0.21
LYSMD3-204ENST00000509384 NLRP2Q9NX02 1062 aa16.36■□□□□ 0.21
LYSMD3-204ENST00000509384 DCTN1Q14203 1278 aa16.35■□□□□ 0.21
LYSMD3-204ENST00000509384 LAS1LQ9Y4W2 734 aaKnown RBP16.35■□□□□ 0.21
LYSMD3-204ENST00000509384 LMO7Q8WWI1 1683 aa16.35■□□□□ 0.21
LYSMD3-204ENST00000509384 GNAI1P63096 354 aa16.35■□□□□ 0.21
LYSMD3-204ENST00000509384 MCM10Q7L590 875 aa16.35■□□□□ 0.21
LYSMD3-204ENST00000509384 MAP3K5Q99683 1374 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms